RNA–Protein interactions for RNA: ENST00000500197.6

LINC00461-201, long intergenic non-protein coding RNA 461, humanhuman

TSL 1 (best) BASIC

Gene LINC00461, Length 3,381 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00461-201ENST00000500197 KRTAP9-6A8MVA2 160 aa3.4□□□□□ -1.86
LINC00461-201ENST00000500197 KRTAP2-3P0C7H8 128 aa3.4□□□□□ -1.87
LINC00461-201ENST00000500197 KRTAP2-4Q9BYR9 128 aa3.4□□□□□ -1.87
LINC00461-201ENST00000500197 KRTAP2-1Q9BYU5 128 aa3.4□□□□□ -1.87
LINC00461-201ENST00000500197 LCE3BQ5TA77 95 aa3.38□□□□□ -1.87
LINC00461-201ENST00000500197 KRTAP4-12Q9BQ66 201 aa3.38□□□□□ -1.87
LINC00461-201ENST00000500197 MT1GP13640 62 aa3.31□□□□□ -1.88
LINC00461-201ENST00000500197 KRTAP19-3Q7Z4W3 81 aa3.3□□□□□ -1.88
LINC00461-201ENST00000500197 KMT2DO14686 5537 aa3.27□□□□□ -1.89
LINC00461-201ENST00000500197 MT1MQ8N339 61 aa3.27□□□□□ -1.89
LINC00461-201ENST00000500197 KRTAP4-7Q9BYR0 210 aa3.26□□□□□ -1.89
LINC00461-201ENST00000500197 KRTAP9-9Q9BYP9 154 aa3.26□□□□□ -1.89
LINC00461-201ENST00000500197 KRTAP9-4Q9BYQ2 154 aa3.26□□□□□ -1.89
LINC00461-201ENST00000500197 LCE5AQ5TCM9 118 aa3.25□□□□□ -1.89
LINC00461-201ENST00000500197 KRTAP5-9P26371 169 aa3.19□□□□□ -1.9
LINC00461-201ENST00000500197 FCGBPQ9Y6R7 5405 aaPredicted RBP3.18□□□□□ -1.9
LINC00461-201ENST00000500197 OBSCNQ5VST9 7968 aa3.11□□□□□ -1.91
LINC00461-201ENST00000500197 LCE4AQ5TA78 99 aa3.1□□□□□ -1.91
LINC00461-201ENST00000500197 LCE1DQ5T752 114 aa3.1□□□□□ -1.91
LINC00461-201ENST00000500197 KRTAP4-3Q9BYR4 195 aa3.09□□□□□ -1.91
LINC00461-201ENST00000500197 DSTQ03001 7570 aaKnown RBP3.06□□□□□ -1.92
LINC00461-201ENST00000500197 SPRR2FQ96RM1 72 aa3.06□□□□□ -1.92
LINC00461-201ENST00000500197 LCE1AQ5T7P2 110 aa3.05□□□□□ -1.92
LINC00461-201ENST00000500197 KRTAP5-5Q701N2 237 aaPredicted RBP3.05□□□□□ -1.92
LINC00461-201ENST00000500197 KRTAP9-7A8MTY7 169 aa3.02□□□□□ -1.93
LINC00461-201ENST00000500197 CRCT1Q9UGL9 99 aa3.02□□□□□ -1.93
LINC00461-201ENST00000500197 MT1AP04731 61 aa3□□□□□ -1.93
LINC00461-201ENST00000500197 KRTAP4-9Q9BYQ8 210 aa2.97□□□□□ -1.93
LINC00461-201ENST00000500197 KRTAP4-2Q9BYR5 136 aa2.94□□□□□ -1.94
LINC00461-201ENST00000500197 KRTAP6-3Q3LI67 103 aa2.93□□□□□ -1.94
LINC00461-201ENST00000500197 MACF1Q9UPN3 7388 aaKnown RBP2.93□□□□□ -1.94
LINC00461-201ENST00000500197 SYNE1Q8NF91 8797 aaKnown RBP2.92□□□□□ -1.94
LINC00461-201ENST00000500197 MUC12Q9UKN1 5478 aa2.92□□□□□ -1.94
LINC00461-201ENST00000500197 KRTAP4-11Q9BYQ6 195 aa2.89□□□□□ -1.95
LINC00461-201ENST00000500197 KRTAP6-1Q3LI64 71 aa2.88□□□□□ -1.95
LINC00461-201ENST00000500197 SPRR2EP22531 72 aa2.86□□□□□ -1.95
LINC00461-201ENST00000500197 SPRR2BP35325 72 aa2.86□□□□□ -1.95
LINC00461-201ENST00000500197 SPRR2AP35326 72 aa2.86□□□□□ -1.95
LINC00461-201ENST00000500197 SYNE2Q8WXH0 6885 aaKnown RBP2.8□□□□□ -1.96
LINC00461-201ENST00000500197 KRTAP5-4Q6L8H1 288 aa2.78□□□□□ -1.96
LINC00461-201ENST00000500197 KRTAP12-4P60329 112 aa2.77□□□□□ -1.97
LINC00461-201ENST00000500197 SPRR2DP22532 72 aa2.76□□□□□ -1.97
LINC00461-201ENST00000500197 MDN1Q9NU22 5596 aa2.71□□□□□ -1.98
LINC00461-201ENST00000500197 LCE3DQ9BYE3 92 aa2.69□□□□□ -1.98
LINC00461-201ENST00000500197 LCE3EQ5T5B0 92 aa2.68□□□□□ -1.98
LINC00461-201ENST00000500197 MT3P25713 68 aa2.64□□□□□ -1.99
LINC00461-201ENST00000500197 KRTAP5-3Q6L8H2 238 aa2.64□□□□□ -1.99
LINC00461-201ENST00000500197 NEBP20929 6669 aa2.61□□□□□ -1.99
LINC00461-201ENST00000500197 KRTAP5-2Q701N4 177 aa2.59□□□□□ -1.99
LINC00461-201ENST00000500197 KRTAP6-2Q3LI66 62 aa2.57□□□□□ -2
LINC00461-201ENST00000500197 KRTAP20-2Q3LI61 65 aa2.47□□□□□ -2.01
LINC00461-201ENST00000500197 KRTAP20-1Q3LI63 56 aa2.44□□□□□ -2.02
LINC00461-201ENST00000500197 PRM1P04553 51 aa2.42□□□□□ -2.02
LINC00461-201ENST00000500197 KRTAP2-2Q9BYT5 123 aa2.42□□□□□ -2.02
LINC00461-201ENST00000500197 LCE1EQ5T753 118 aa2.35□□□□□ -2.03
LINC00461-201ENST00000500197 MT4P47944 62 aa2.29□□□□□ -2.04
LINC00461-201ENST00000500197 GPR98Q8WXG9 6306 aa2.25□□□□□ -2.05
LINC00461-201ENST00000500197 KRTAP5-10Q6L8G5 202 aa2.24□□□□□ -2.05
LINC00461-201ENST00000500197 HMCN1Q96RW7 5635 aa2.23□□□□□ -2.05
LINC00461-201ENST00000500197 KRTAP5-1Q6L8H4 278 aa2.18□□□□□ -2.06
LINC00461-201ENST00000500197 LCE1CQ5T751 118 aa2.17□□□□□ -2.06
LINC00461-201ENST00000500197 LCE1BQ5T7P3 118 aa2.17□□□□□ -2.06
LINC00461-201ENST00000500197 KRTAP5-7Q6L8G8 165 aa2.16□□□□□ -2.06
LINC00461-201ENST00000500197 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.15□□□□□ -2.07
LINC00461-201ENST00000500197 KRTAP5-8O75690 187 aa2.12□□□□□ -2.07
LINC00461-201ENST00000500197 LCE1FQ5T754 118 aa2.09□□□□□ -2.08
LINC00461-201ENST00000500197 MUC5ACP98088 5654 aa2.08□□□□□ -2.08
LINC00461-201ENST00000500197 MUC19Q7Z5P9 8384 aa2.08□□□□□ -2.08
LINC00461-201ENST00000500197 KRTAP5-11Q6L8G4 156 aa1.96□□□□□ -2.09
LINC00461-201ENST00000500197 MUC5BQ9HC84 5762 aaPredicted RBP1.96□□□□□ -2.1
LINC00461-201ENST00000500197 KRTAP21-2Q3LI59 83 aa1.95□□□□□ -2.1
LINC00461-201ENST00000500197 AHNAK2Q8IVF2 5795 aa1.89□□□□□ -2.11
LINC00461-201ENST00000500197 AHNAKQ09666 5890 aaKnown RBP1.73□□□□□ -2.13
LINC00461-201ENST00000500197 KRTAP21-1Q3LI58 79 aa1.68□□□□□ -2.14
LINC00461-201ENST00000500197 KRTAP4-4Q9BYR3 166 aa1.65□□□□□ -2.14
LINC00461-201ENST00000500197 PHGR1C9JFL3 82 aa1.61□□□□□ -2.15
LINC00461-201ENST00000500197 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 83 ms