RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 LCE3BQ5TA77 95 aa6.05□□□□□ -1.44
PRKCB-210ENST00000498739 CDC42SE1Q9NRR8 79 aa6.04□□□□□ -1.44
PRKCB-210ENST00000498739 KRTAP2-2Q9BYT5 123 aa6.03□□□□□ -1.44
PRKCB-210ENST00000498739 KRTAP2-1Q9BYU5 128 aa6.03□□□□□ -1.44
PRKCB-210ENST00000498739 MT1GP13640 62 aa5.99□□□□□ -1.45
PRKCB-210ENST00000498739 MT1LQ93083 61 aa5.99□□□□□ -1.45
PRKCB-210ENST00000498739 KRTAP12-3P60328 96 aa5.96□□□□□ -1.46
PRKCB-210ENST00000498739 PP632Q6XCG6 107 aa5.95□□□□□ -1.46
PRKCB-210ENST00000498739 ROMO1P60602 79 aa5.91□□□□□ -1.46
PRKCB-210ENST00000498739 MT1MQ8N339 61 aa5.9□□□□□ -1.46
PRKCB-210ENST00000498739 KRTAP23-1A1A580 65 aa5.85□□□□□ -1.47
PRKCB-210ENST00000498739 DSTQ03001 7570 aaKnown RBP5.83□□□□□ -1.48
PRKCB-210ENST00000498739 KRTAP4-3Q9BYR4 195 aa5.76□□□□□ -1.49
PRKCB-210ENST00000498739 KRTAP4-7Q9BYR0 210 aa5.72□□□□□ -1.49
PRKCB-210ENST00000498739 BRK1Q8WUW1 75 aa5.7□□□□□ -1.5
PRKCB-210ENST00000498739 KRTAP15-1Q3LI76 137 aa5.65□□□□□ -1.5
PRKCB-210ENST00000498739 KRTAP19-4Q3LI73 84 aa5.6□□□□□ -1.51
PRKCB-210ENST00000498739 KRTAP4-9Q9BYQ8 210 aa5.55□□□□□ -1.52
PRKCB-210ENST00000498739 LCE4AQ5TA78 99 aa5.52□□□□□ -1.53
PRKCB-210ENST00000498739 LCE3CQ5T5A8 94 aa5.51□□□□□ -1.53
PRKCB-210ENST00000498739 LCE1DQ5T752 114 aa5.45□□□□□ -1.54
PRKCB-210ENST00000498739 KRTAP5-4Q6L8H1 288 aa5.45□□□□□ -1.54
PRKCB-210ENST00000498739 MT4P47944 62 aa5.44□□□□□ -1.54
PRKCB-210ENST00000498739 LOC100996750A0A140TA64 210 aa5.41□□□□□ -1.54
PRKCB-210ENST00000498739 KRTAP5-5Q701N2 237 aaPredicted RBP5.37□□□□□ -1.55
PRKCB-210ENST00000498739 PMAIP1Q13794 54 aa5.35□□□□□ -1.55
PRKCB-210ENST00000498739 HMCN1Q96RW7 5635 aa5.3□□□□□ -1.56
PRKCB-210ENST00000498739 KRTAP4-6Q9BYQ5 205 aa5.3□□□□□ -1.56
PRKCB-210ENST00000498739 GPR98Q8WXG9 6306 aa5.2□□□□□ -1.58
PRKCB-210ENST00000498739 KRTAP9-6A8MVA2 160 aa5.18□□□□□ -1.58
PRKCB-210ENST00000498739 KRTAP12-4P60329 112 aa5.18□□□□□ -1.58
PRKCB-210ENST00000498739 SYNE1Q8NF91 8797 aaKnown RBP5.16□□□□□ -1.58
PRKCB-210ENST00000498739 PRO0628Q9UI54 55 aa5.15□□□□□ -1.59
PRKCB-210ENST00000498739 KRTAP20-2Q3LI61 65 aa5.14□□□□□ -1.59
PRKCB-210ENST00000498739 SPRR5A0A1B0GTR4 108 aa5.13□□□□□ -1.59
PRKCB-210ENST00000498739 PRAC1Q96KF2 57 aa5.11□□□□□ -1.59
PRKCB-210ENST00000498739 MT1AP04731 61 aa5.1□□□□□ -1.59
PRKCB-210ENST00000498739 KRTAP6-1Q3LI64 71 aa5.05□□□□□ -1.6
PRKCB-210ENST00000498739 AHNAK2Q8IVF2 5795 aa5.02□□□□□ -1.61
PRKCB-210ENST00000498739 KRTAP5-3Q6L8H2 238 aa4.97□□□□□ -1.61
PRKCB-210ENST00000498739 KRTAP5-10Q6L8G5 202 aa4.91□□□□□ -1.62
PRKCB-210ENST00000498739 KRTAP9-4Q9BYQ2 154 aa4.9□□□□□ -1.63
PRKCB-210ENST00000498739 KTN1-AS1Q86SY8 53 aa4.89□□□□□ -1.63
PRKCB-210ENST00000498739 KRTAP5-2Q701N4 177 aa4.82□□□□□ -1.64
PRKCB-210ENST00000498739 KRTAP6-2Q3LI66 62 aa4.78□□□□□ -1.64
PRKCB-210ENST00000498739 SVIPQ8NHG7 77 aa4.7□□□□□ -1.66
PRKCB-210ENST00000498739 KRTAP5-7Q6L8G8 165 aa4.67□□□□□ -1.66
PRKCB-210ENST00000498739 MT3P25713 68 aa4.66□□□□□ -1.66
PRKCB-210ENST00000498739 KRTAP4-11Q9BYQ6 195 aa4.62□□□□□ -1.67
PRKCB-210ENST00000498739 KRTAP5-8O75690 187 aa4.46□□□□□ -1.7
PRKCB-210ENST00000498739 OBSCNQ5VST9 7968 aa4.44□□□□□ -1.7
PRKCB-210ENST00000498739 KRTAP5-1Q6L8H4 278 aa4.28□□□□□ -1.72
PRKCB-210ENST00000498739 LUZP6Q538Z0 58 aa4.27□□□□□ -1.73
PRKCB-210ENST00000498739 KRTAP9-9Q9BYP9 154 aa4.19□□□□□ -1.74
PRKCB-210ENST00000498739 LCE1EQ5T753 118 aa4.18□□□□□ -1.74
PRKCB-210ENST00000498739 MUC5ACP98088 5654 aa4.15□□□□□ -1.74
PRKCB-210ENST00000498739 MUC5BQ9HC84 5762 aaPredicted RBP4.06□□□□□ -1.76
PRKCB-210ENST00000498739 AHNAKQ09666 5890 aaKnown RBP4.05□□□□□ -1.76
PRKCB-210ENST00000498739 LCE3DQ9BYE3 92 aa4.03□□□□□ -1.76
PRKCB-210ENST00000498739 LCE1BQ5T7P3 118 aa3.96□□□□□ -1.78
PRKCB-210ENST00000498739 KRTAP4-2Q9BYR5 136 aa3.94□□□□□ -1.78
PRKCB-210ENST00000498739 LCE1CQ5T751 118 aa3.89□□□□□ -1.79
PRKCB-210ENST00000498739 LCE3EQ5T5B0 92 aa3.84□□□□□ -1.79
PRKCB-210ENST00000498739 NDUFAF8A1L188 74 aa3.67□□□□□ -1.82
PRKCB-210ENST00000498739 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.56□□□□□ -1.84
PRKCB-210ENST00000498739 KRTAP5-11Q6L8G4 156 aa3.5□□□□□ -1.85
PRKCB-210ENST00000498739 KRTAP4-12Q9BQ66 201 aa3.49□□□□□ -1.85
PRKCB-210ENST00000498739 LCE1FQ5T754 118 aa3.33□□□□□ -1.88
PRKCB-210ENST00000498739 KRTAP21-2Q3LI59 83 aa3.32□□□□□ -1.88
PRKCB-210ENST00000498739 PRM1P04553 51 aa3.04□□□□□ -1.92
PRKCB-210ENST00000498739 A0A0A0MQY5 61 aa3.02□□□□□ -1.93
PRKCB-210ENST00000498739 KRTAP4-4Q9BYR3 166 aa3.02□□□□□ -1.93
PRKCB-210ENST00000498739 PHGR1C9JFL3 82 aa3.01□□□□□ -1.93
PRKCB-210ENST00000498739 INE1O15225 51 aa2.97□□□□□ -1.93
PRKCB-210ENST00000498739 H3BS24 57 aa2.8□□□□□ -1.96
PRKCB-210ENST00000498739 MUC19Q7Z5P9 8384 aa2.73□□□□□ -1.97
PRKCB-210ENST00000498739 KRTAP21-1Q3LI58 79 aa2.16□□□□□ -2.06
PRKCB-210ENST00000498739 MUC16Q8WXI7 14507 aa1.94□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 74.2 ms