RNA–Protein interactions for RNA: ENST00000498595.5

HDLBP-247, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-247ENST00000498595 LCE3AQ5TA76 89 aa5.1□□□□□ -1.59
HDLBP-247ENST00000498595 C10orf95Q9H7T3 257 aa5.1□□□□□ -1.59
HDLBP-247ENST00000498595 MT4P47944 62 aa5.09□□□□□ -1.59
HDLBP-247ENST00000498595 ATP5EP56381 51 aaPredicted RBP5.01□□□□□ -1.61
HDLBP-247ENST00000498595 KRTAP4-3Q9BYR4 195 aa5□□□□□ -1.61
HDLBP-247ENST00000498595 HMCN1Q96RW7 5635 aa4.98□□□□□ -1.61
HDLBP-247ENST00000498595 KRTAP5-4Q6L8H1 288 aa4.96□□□□□ -1.62
HDLBP-247ENST00000498595 RPS28P62857 69 aaKnown RBP4.94□□□□□ -1.62
HDLBP-247ENST00000498595 KRTAP12-3P60328 96 aa4.93□□□□□ -1.62
HDLBP-247ENST00000498595 LINC01558Q9Y6Z2 57 aa4.92□□□□□ -1.62
HDLBP-247ENST00000498595 UQCR11O14957 56 aa4.89□□□□□ -1.63
HDLBP-247ENST00000498595 KRTAP4-6Q9BYQ5 205 aa4.89□□□□□ -1.63
HDLBP-247ENST00000498595 TMEM258P61165 79 aa4.88□□□□□ -1.63
HDLBP-247ENST00000498595 V9GYY9 64 aa4.87□□□□□ -1.63
HDLBP-247ENST00000498595 KRTAP4-7Q9BYR0 210 aa4.84□□□□□ -1.63
HDLBP-247ENST00000498595 PRO0628Q9UI54 55 aa4.84□□□□□ -1.63
HDLBP-247ENST00000498595 KRTAP5-10Q6L8G5 202 aa4.82□□□□□ -1.64
HDLBP-247ENST00000498595 AHNAK2Q8IVF2 5795 aa4.8□□□□□ -1.64
HDLBP-247ENST00000498595 KRTAP25-1Q3LHN0 102 aa4.79□□□□□ -1.64
HDLBP-247ENST00000498595 K7ERS5 55 aa4.78□□□□□ -1.64
HDLBP-247ENST00000498595 MIR22HGQ0VDD5 57 aa4.75□□□□□ -1.65
HDLBP-247ENST00000498595 KRTAP12-4P60329 112 aa4.72□□□□□ -1.65
HDLBP-247ENST00000498595 KRTAP20-2Q3LI61 65 aa4.71□□□□□ -1.66
HDLBP-247ENST00000498595 KRTAP5-5Q701N2 237 aaPredicted RBP4.7□□□□□ -1.66
HDLBP-247ENST00000498595 SPRR5A0A1B0GTR4 108 aa4.69□□□□□ -1.66
HDLBP-247ENST00000498595 KRTAP5-3Q6L8H2 238 aa4.69□□□□□ -1.66
HDLBP-247ENST00000498595 KRTAP19-4Q3LI73 84 aa4.68□□□□□ -1.66
HDLBP-247ENST00000498595 PSPHP1O15172 72 aa4.66□□□□□ -1.66
HDLBP-247ENST00000498595 KRTAP5-7Q6L8G8 165 aa4.66□□□□□ -1.66
HDLBP-247ENST00000498595 LOC100996750A0A140TA64 210 aa4.6□□□□□ -1.67
HDLBP-247ENST00000498595 PMAIP1Q13794 54 aa4.59□□□□□ -1.67
HDLBP-247ENST00000498595 KRTAP23-1A1A580 65 aa4.58□□□□□ -1.68
HDLBP-247ENST00000498595 Q1T7F1 81 aa4.57□□□□□ -1.68
HDLBP-247ENST00000498595 KRTAP15-1Q3LI76 137 aa4.56□□□□□ -1.68
HDLBP-247ENST00000498595 LCE3CQ5T5A8 94 aa4.51□□□□□ -1.69
HDLBP-247ENST00000498595 A6NED7 52 aa4.5□□□□□ -1.69
HDLBP-247ENST00000498595 BRK1Q8WUW1 75 aa4.5□□□□□ -1.69
HDLBP-247ENST00000498595 CDC42SE1Q9NRR8 79 aa4.45□□□□□ -1.7
HDLBP-247ENST00000498595 SYNE1Q8NF91 8797 aaKnown RBP4.43□□□□□ -1.7
HDLBP-247ENST00000498595 A0A0A0MQY5 61 aa4.38□□□□□ -1.71
HDLBP-247ENST00000498595 KTN1-AS1Q86SY8 53 aa4.38□□□□□ -1.71
HDLBP-247ENST00000498595 MT1AP04731 61 aa4.37□□□□□ -1.71
HDLBP-247ENST00000498595 ROMO1P60602 79 aa4.35□□□□□ -1.71
HDLBP-247ENST00000498595 KRTAP4-11Q9BYQ6 195 aa4.34□□□□□ -1.71
HDLBP-247ENST00000498595 KRTAP6-1Q3LI64 71 aa4.33□□□□□ -1.72
HDLBP-247ENST00000498595 KRTAP5-2Q701N4 177 aa4.31□□□□□ -1.72
HDLBP-247ENST00000498595 KRTAP9-4Q9BYQ2 154 aa4.25□□□□□ -1.73
HDLBP-247ENST00000498595 KRTAP9-6A8MVA2 160 aa4.19□□□□□ -1.74
HDLBP-247ENST00000498595 KRTAP6-2Q3LI66 62 aa4.19□□□□□ -1.74
HDLBP-247ENST00000498595 KRTAP5-8O75690 187 aa4.16□□□□□ -1.74
HDLBP-247ENST00000498595 KRTAP9-9Q9BYP9 154 aa4.05□□□□□ -1.76
HDLBP-247ENST00000498595 MT3P25713 68 aa4.04□□□□□ -1.76
HDLBP-247ENST00000498595 OBSCNQ5VST9 7968 aa4.04□□□□□ -1.76
HDLBP-247ENST00000498595 MUC5ACP98088 5654 aa4.02□□□□□ -1.77
HDLBP-247ENST00000498595 AHNAKQ09666 5890 aaKnown RBP3.97□□□□□ -1.77
HDLBP-247ENST00000498595 MUC5BQ9HC84 5762 aaPredicted RBP3.96□□□□□ -1.78
HDLBP-247ENST00000498595 KRTAP5-1Q6L8H4 278 aa3.89□□□□□ -1.79
HDLBP-247ENST00000498595 PRAC1Q96KF2 57 aa3.83□□□□□ -1.8
HDLBP-247ENST00000498595 LCE1EQ5T753 118 aa3.73□□□□□ -1.81
HDLBP-247ENST00000498595 LUZP6Q538Z0 58 aa3.61□□□□□ -1.83
HDLBP-247ENST00000498595 LCE1BQ5T7P3 118 aa3.54□□□□□ -1.84
HDLBP-247ENST00000498595 NDUFAF8A1L188 74 aa3.51□□□□□ -1.85
HDLBP-247ENST00000498595 KRTAP4-2Q9BYR5 136 aa3.49□□□□□ -1.85
HDLBP-247ENST00000498595 LCE1CQ5T751 118 aa3.44□□□□□ -1.86
HDLBP-247ENST00000498595 KRTAP4-12Q9BQ66 201 aa3.26□□□□□ -1.89
HDLBP-247ENST00000498595 LCE3DQ9BYE3 92 aa3.25□□□□□ -1.89
HDLBP-247ENST00000498595 KRTAP5-11Q6L8G4 156 aa3.13□□□□□ -1.91
HDLBP-247ENST00000498595 LCE1FQ5T754 118 aa3.1□□□□□ -1.91
HDLBP-247ENST00000498595 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.1□□□□□ -1.91
HDLBP-247ENST00000498595 INE1O15225 51 aa3.06□□□□□ -1.92
HDLBP-247ENST00000498595 LCE3EQ5T5B0 92 aa3.04□□□□□ -1.92
HDLBP-247ENST00000498595 PHGR1C9JFL3 82 aa2.86□□□□□ -1.95
HDLBP-247ENST00000498595 KRTAP21-2Q3LI59 83 aa2.84□□□□□ -1.95
HDLBP-247ENST00000498595 KRTAP4-4Q9BYR3 166 aa2.64□□□□□ -1.99
HDLBP-247ENST00000498595 MUC19Q7Z5P9 8384 aa2.51□□□□□ -2.01
HDLBP-247ENST00000498595 PRM1P04553 51 aa2.23□□□□□ -2.05
HDLBP-247ENST00000498595 KRTAP21-1Q3LI58 79 aa2.18□□□□□ -2.06
HDLBP-247ENST00000498595 MUC16Q8WXI7 14507 aa1.7□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 5.9 ms