RNA–Protein interactions for RNA: ENST00000498236.1

CDC42-205, Transcript of cell division cycle 42, humanhuman

TSL 5

Gene CDC42, Length 816 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-205ENST00000498236 LUZP6Q538Z0 58 aa3.39□□□□□ -1.87
CDC42-205ENST00000498236 KRTAP12-2P59991 146 aa3.38□□□□□ -1.87
CDC42-205ENST00000498236 SPINT4Q6UDR6 99 aa3.35□□□□□ -1.87
CDC42-205ENST00000498236 KRTAP19-8Q3LI54 63 aa3.34□□□□□ -1.87
CDC42-205ENST00000498236 CRCT1Q9UGL9 99 aa3.3□□□□□ -1.88
CDC42-205ENST00000498236 OBSCNQ5VST9 7968 aa3.28□□□□□ -1.88
CDC42-205ENST00000498236 PLAC4Q8WY50 150 aa3.28□□□□□ -1.88
CDC42-205ENST00000498236 MT1BP07438 61 aa3.27□□□□□ -1.89
CDC42-205ENST00000498236 ROMO1P60602 79 aa3.27□□□□□ -1.89
CDC42-205ENST00000498236 FSIP2Q5CZC0 6907 aa3.26□□□□□ -1.89
CDC42-205ENST00000498236 KRTAP4-3Q9BYR4 195 aa3.21□□□□□ -1.9
CDC42-205ENST00000498236 C10orf95Q9H7T3 257 aa3.21□□□□□ -1.9
CDC42-205ENST00000498236 USH2AO75445 5202 aa3.21□□□□□ -1.9
CDC42-205ENST00000498236 LCE3EQ5T5B0 92 aa3.18□□□□□ -1.9
CDC42-205ENST00000498236 MT1XP80297 61 aa3.16□□□□□ -1.9
CDC42-205ENST00000498236 KRTAP25-1Q3LHN0 102 aa3.16□□□□□ -1.9
CDC42-205ENST00000498236 PRO2289Q9P1D8 64 aa3.14□□□□□ -1.91
CDC42-205ENST00000498236 TNP1P09430 55 aa3.12□□□□□ -1.91
CDC42-205ENST00000498236 KRTAP19-6Q3LI70 58 aa3.08□□□□□ -1.92
CDC42-205ENST00000498236 SSPOA2VEC9 5147 aa3.07□□□□□ -1.92
CDC42-205ENST00000498236 PP632Q6XCG6 107 aa3.06□□□□□ -1.92
CDC42-205ENST00000498236 KRTAP5-2Q701N4 177 aa3.05□□□□□ -1.92
CDC42-205ENST00000498236 LCE3AQ5TA76 89 aa2.98□□□□□ -1.93
CDC42-205ENST00000498236 FCGBPQ9Y6R7 5405 aaPredicted RBP2.97□□□□□ -1.93
CDC42-205ENST00000498236 KRTAP8-1Q8IUC2 63 aa2.96□□□□□ -1.94
CDC42-205ENST00000498236 KMT2DO14686 5537 aa2.89□□□□□ -1.95
CDC42-205ENST00000498236 KRTAP12-3P60328 96 aa2.87□□□□□ -1.95
CDC42-205ENST00000498236 KRTAP19-5Q3LI72 72 aa2.84□□□□□ -1.95
CDC42-205ENST00000498236 NEBP20929 6669 aa2.84□□□□□ -1.96
CDC42-205ENST00000498236 KRTAP19-7Q3SYF9 63 aa2.83□□□□□ -1.96
CDC42-205ENST00000498236 SYNE2Q8WXH0 6885 aaKnown RBP2.82□□□□□ -1.96
CDC42-205ENST00000498236 MACF1Q9UPN3 7388 aaKnown RBP2.81□□□□□ -1.96
CDC42-205ENST00000498236 GPR98Q8WXG9 6306 aa2.81□□□□□ -1.96
CDC42-205ENST00000498236 KRTAP20-1Q3LI63 56 aa2.81□□□□□ -1.96
CDC42-205ENST00000498236 MT1EP04732 61 aa2.78□□□□□ -1.96
CDC42-205ENST00000498236 SPRR5A0A1B0GTR4 108 aa2.76□□□□□ -1.97
CDC42-205ENST00000498236 MT1LQ93083 61 aa2.72□□□□□ -1.97
CDC42-205ENST00000498236 KRTAP5-5Q701N2 237 aaPredicted RBP2.71□□□□□ -1.98
CDC42-205ENST00000498236 SPRR2FQ96RM1 72 aa2.69□□□□□ -1.98
CDC42-205ENST00000498236 LCE3DQ9BYE3 92 aa2.69□□□□□ -1.98
CDC42-205ENST00000498236 MUC12Q9UKN1 5478 aa2.68□□□□□ -1.98
CDC42-205ENST00000498236 KRTAP19-3Q7Z4W3 81 aa2.67□□□□□ -1.98
CDC42-205ENST00000498236 MT1GP13640 62 aa2.66□□□□□ -1.98
CDC42-205ENST00000498236 KRTAP6-3Q3LI67 103 aa2.66□□□□□ -1.98
CDC42-205ENST00000498236 LCE1CQ5T751 118 aa2.64□□□□□ -1.99
CDC42-205ENST00000498236 LCE1BQ5T7P3 118 aa2.64□□□□□ -1.99
CDC42-205ENST00000498236 MDN1Q9NU22 5596 aa2.64□□□□□ -1.99
CDC42-205ENST00000498236 MT1MQ8N339 61 aa2.61□□□□□ -1.99
CDC42-205ENST00000498236 INE1O15225 51 aa2.59□□□□□ -1.99
CDC42-205ENST00000498236 KRTAP5-8O75690 187 aa2.58□□□□□ -2
CDC42-205ENST00000498236 SPRR2EP22531 72 aa2.56□□□□□ -2
CDC42-205ENST00000498236 SPRR2BP35325 72 aa2.56□□□□□ -2
CDC42-205ENST00000498236 SPRR2AP35326 72 aa2.56□□□□□ -2
CDC42-205ENST00000498236 KRTAP2-3P0C7H8 128 aa2.5□□□□□ -2.01
CDC42-205ENST00000498236 KRTAP2-4Q9BYR9 128 aa2.5□□□□□ -2.01
CDC42-205ENST00000498236 SPRR2DP22532 72 aa2.47□□□□□ -2.01
CDC42-205ENST00000498236 DSTQ03001 7570 aaKnown RBP2.44□□□□□ -2.02
CDC42-205ENST00000498236 AHNAK2Q8IVF2 5795 aa2.4□□□□□ -2.03
CDC42-205ENST00000498236 KRTAP2-1Q9BYU5 128 aa2.38□□□□□ -2.03
CDC42-205ENST00000498236 MT1AP04731 61 aa2.32□□□□□ -2.04
CDC42-205ENST00000498236 KRTAP6-1Q3LI64 71 aa2.27□□□□□ -2.05
CDC42-205ENST00000498236 SYNE1Q8NF91 8797 aaKnown RBP2.25□□□□□ -2.05
CDC42-205ENST00000498236 MUC19Q7Z5P9 8384 aa2.22□□□□□ -2.05
CDC42-205ENST00000498236 KRTAP5-10Q6L8G5 202 aa2.22□□□□□ -2.05
CDC42-205ENST00000498236 KRTAP5-7Q6L8G8 165 aa2.22□□□□□ -2.05
CDC42-205ENST00000498236 KRTAP12-4P60329 112 aa2.19□□□□□ -2.06
CDC42-205ENST00000498236 HMCN1Q96RW7 5635 aa2.19□□□□□ -2.06
CDC42-205ENST00000498236 AHNAKQ09666 5890 aaKnown RBP2.18□□□□□ -2.06
CDC42-205ENST00000498236 MT4P47944 62 aa2.11□□□□□ -2.07
CDC42-205ENST00000498236 KRTAP20-2Q3LI61 65 aa2.1□□□□□ -2.07
CDC42-205ENST00000498236 KRTAP6-2Q3LI66 62 aa2.09□□□□□ -2.07
CDC42-205ENST00000498236 MUC5BQ9HC84 5762 aaPredicted RBP2.08□□□□□ -2.08
CDC42-205ENST00000498236 MUC5ACP98088 5654 aa2□□□□□ -2.09
CDC42-205ENST00000498236 KRTAP21-2Q3LI59 83 aa1.89□□□□□ -2.11
CDC42-205ENST00000498236 PRM1P04553 51 aa1.68□□□□□ -2.14
CDC42-205ENST00000498236 PHGR1C9JFL3 82 aa1.35□□□□□ -2.19
CDC42-205ENST00000498236 KRTAP21-1Q3LI58 79 aa1.06□□□□□ -2.24
CDC42-205ENST00000498236 MUC16Q8WXI7 14507 aa0.97□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 9.7 ms