RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 ACYP2P14621 99 aa2.6□□□□□ -1.99
TMEM39A-212ENST00000497993 KRTAP13-4Q3LI77 160 aa2.59□□□□□ -1.99
TMEM39A-212ENST00000497993 Q5VV11 94 aa2.58□□□□□ -2
TMEM39A-212ENST00000497993 PP632Q6XCG6 107 aa2.58□□□□□ -2
TMEM39A-212ENST00000497993 SPRR2GQ9BYE4 73 aa2.58□□□□□ -2
TMEM39A-212ENST00000497993 KRTAP19-8Q3LI54 63 aa2.57□□□□□ -2
TMEM39A-212ENST00000497993 S4R3F8 94 aa2.57□□□□□ -2
TMEM39A-212ENST00000497993 H0YAA0 97 aa2.56□□□□□ -2
TMEM39A-212ENST00000497993 KRTAP5-9P26371 169 aa2.56□□□□□ -2
TMEM39A-212ENST00000497993 PRR15LQ9BU68 103 aa2.55□□□□□ -2
TMEM39A-212ENST00000497993 MACF1Q9UPN3 7388 aaKnown RBP2.54□□□□□ -2
TMEM39A-212ENST00000497993 MT1BP07438 61 aa2.54□□□□□ -2
TMEM39A-212ENST00000497993 CRIPTQ9P021 101 aa2.53□□□□□ -2
TMEM39A-212ENST00000497993 SYNE2Q8WXH0 6885 aaKnown RBP2.52□□□□□ -2.01
TMEM39A-212ENST00000497993 LINC01558Q9Y6Z2 57 aa2.49□□□□□ -2.01
TMEM39A-212ENST00000497993 KRTAP6-3Q3LI67 103 aa2.48□□□□□ -2.01
TMEM39A-212ENST00000497993 UQCR11O14957 56 aa2.45□□□□□ -2.02
TMEM39A-212ENST00000497993 A0A1B0GU69 56 aa2.44□□□□□ -2.02
TMEM39A-212ENST00000497993 KRTAP5-5Q701N2 237 aaPredicted RBP2.44□□□□□ -2.02
TMEM39A-212ENST00000497993 KRTAP4-3Q9BYR4 195 aa2.44□□□□□ -2.02
TMEM39A-212ENST00000497993 NEBP20929 6669 aa2.43□□□□□ -2.02
TMEM39A-212ENST00000497993 OBSCNQ5VST9 7968 aa2.41□□□□□ -2.02
TMEM39A-212ENST00000497993 KRTAP12-1P59990 96 aa2.4□□□□□ -2.03
TMEM39A-212ENST00000497993 LCE3DQ9BYE3 92 aa2.4□□□□□ -2.03
TMEM39A-212ENST00000497993 MT1XP80297 61 aa2.38□□□□□ -2.03
TMEM39A-212ENST00000497993 SPATA8Q6RVD6 105 aa2.37□□□□□ -2.03
TMEM39A-212ENST00000497993 MUC12Q9UKN1 5478 aa2.37□□□□□ -2.03
TMEM39A-212ENST00000497993 KMT2DO14686 5537 aa2.35□□□□□ -2.03
TMEM39A-212ENST00000497993 M0QZ58 72 aa2.34□□□□□ -2.03
TMEM39A-212ENST00000497993 PLAC4Q8WY50 150 aa2.32□□□□□ -2.04
TMEM39A-212ENST00000497993 LCE1CQ5T751 118 aa2.31□□□□□ -2.04
TMEM39A-212ENST00000497993 LCE1BQ5T7P3 118 aa2.31□□□□□ -2.04
TMEM39A-212ENST00000497993 MDN1Q9NU22 5596 aa2.31□□□□□ -2.04
TMEM39A-212ENST00000497993 KRTAP8-1Q8IUC2 63 aa2.24□□□□□ -2.05
TMEM39A-212ENST00000497993 KRTAP20-1Q3LI63 56 aa2.23□□□□□ -2.05
TMEM39A-212ENST00000497993 SPRR2FQ96RM1 72 aa2.23□□□□□ -2.05
TMEM39A-212ENST00000497993 KRTAP2-3P0C7H8 128 aa2.2□□□□□ -2.06
TMEM39A-212ENST00000497993 KRTAP2-4Q9BYR9 128 aa2.2□□□□□ -2.06
TMEM39A-212ENST00000497993 SPRR2EP22531 72 aa2.19□□□□□ -2.06
TMEM39A-212ENST00000497993 SPRR2BP35325 72 aa2.19□□□□□ -2.06
TMEM39A-212ENST00000497993 SPRR2AP35326 72 aa2.19□□□□□ -2.06
TMEM39A-212ENST00000497993 KRTAP5-2Q701N4 177 aa2.15□□□□□ -2.07
TMEM39A-212ENST00000497993 KRTAP19-7Q3SYF9 63 aa2.14□□□□□ -2.07
TMEM39A-212ENST00000497993 KRTAP12-4P60329 112 aa2.13□□□□□ -2.07
TMEM39A-212ENST00000497993 KRTAP2-1Q9BYU5 128 aa2.13□□□□□ -2.07
TMEM39A-212ENST00000497993 A0A0D9SG42 100 aa2.12□□□□□ -2.07
TMEM39A-212ENST00000497993 SPRR2DP22532 72 aa2.12□□□□□ -2.07
TMEM39A-212ENST00000497993 MT1EP04732 61 aa2.11□□□□□ -2.07
TMEM39A-212ENST00000497993 KRTAP12-3P60328 96 aa2.09□□□□□ -2.07
TMEM39A-212ENST00000497993 KRTAP19-3Q7Z4W3 81 aa2.09□□□□□ -2.07
TMEM39A-212ENST00000497993 TNP1P09430 55 aa2.06□□□□□ -2.08
TMEM39A-212ENST00000497993 C10orf95Q9H7T3 257 aa2.06□□□□□ -2.08
TMEM39A-212ENST00000497993 MT1GP13640 62 aa2.05□□□□□ -2.08
TMEM39A-212ENST00000497993 DSTQ03001 7570 aaKnown RBP2.05□□□□□ -2.08
TMEM39A-212ENST00000497993 KRTAP19-5Q3LI72 72 aa2.03□□□□□ -2.08
TMEM39A-212ENST00000497993 MT1LQ93083 61 aa2.02□□□□□ -2.09
TMEM39A-212ENST00000497993 MT1MQ8N339 61 aa2□□□□□ -2.09
TMEM39A-212ENST00000497993 KRTAP5-7Q6L8G8 165 aa1.9□□□□□ -2.11
TMEM39A-212ENST00000497993 GPR98Q8WXG9 6306 aa1.89□□□□□ -2.11
TMEM39A-212ENST00000497993 HMCN1Q96RW7 5635 aa1.89□□□□□ -2.11
TMEM39A-212ENST00000497993 AHNAK2Q8IVF2 5795 aa1.84□□□□□ -2.12
TMEM39A-212ENST00000497993 MT4P47944 62 aa1.81□□□□□ -2.12
TMEM39A-212ENST00000497993 KRTAP5-10Q6L8G5 202 aa1.81□□□□□ -2.12
TMEM39A-212ENST00000497993 SYNE1Q8NF91 8797 aaKnown RBP1.8□□□□□ -2.12
TMEM39A-212ENST00000497993 KRTAP20-2Q3LI61 65 aa1.79□□□□□ -2.12
TMEM39A-212ENST00000497993 MUC19Q7Z5P9 8384 aa1.79□□□□□ -2.12
TMEM39A-212ENST00000497993 KRTAP5-8O75690 187 aa1.75□□□□□ -2.13
TMEM39A-212ENST00000497993 MT1AP04731 61 aa1.73□□□□□ -2.13
TMEM39A-212ENST00000497993 KRTAP6-1Q3LI64 71 aa1.69□□□□□ -2.14
TMEM39A-212ENST00000497993 KRTAP21-2Q3LI59 83 aa1.62□□□□□ -2.15
TMEM39A-212ENST00000497993 KRTAP6-2Q3LI66 62 aa1.58□□□□□ -2.16
TMEM39A-212ENST00000497993 MUC5ACP98088 5654 aa1.53□□□□□ -2.16
TMEM39A-212ENST00000497993 MUC5BQ9HC84 5762 aaPredicted RBP1.51□□□□□ -2.17
TMEM39A-212ENST00000497993 AHNAKQ09666 5890 aaKnown RBP1.5□□□□□ -2.17
TMEM39A-212ENST00000497993 PRM1P04553 51 aa1.1□□□□□ -2.23
TMEM39A-212ENST00000497993 PHGR1C9JFL3 82 aa1.07□□□□□ -2.24
TMEM39A-212ENST00000497993 KRTAP21-1Q3LI58 79 aa0.9□□□□□ -2.27
TMEM39A-212ENST00000497993 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 7.4 ms