RNA–Protein interactions for RNA: ENST00000497658.5

PHC3-217, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best) BASIC

Gene PHC3, Length 2,087 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-217ENST00000497658 INE1O15225 51 aa2.35□□□□□ -2.03
PHC3-217ENST00000497658 PCLOQ9Y6V0 5065 aa2.34□□□□□ -2.03
PHC3-217ENST00000497658 HERC1Q15751 4861 aa2.33□□□□□ -2.04
PHC3-217ENST00000497658 EPPK1P58107 5090 aaKnown RBP2.32□□□□□ -2.04
PHC3-217ENST00000497658 MUC2Q02817 5179 aa2.32□□□□□ -2.04
PHC3-217ENST00000497658 LCE1FQ5T754 118 aa2.31□□□□□ -2.04
PHC3-217ENST00000497658 LCE3AQ5TA76 89 aa2.31□□□□□ -2.04
PHC3-217ENST00000497658 KRTAP8-1Q8IUC2 63 aa2.3□□□□□ -2.04
PHC3-217ENST00000497658 MUC5BQ9HC84 5762 aaPredicted RBP2.3□□□□□ -2.04
PHC3-217ENST00000497658 HERC2O95714 4834 aa2.25□□□□□ -2.05
PHC3-217ENST00000497658 UBR4Q5T4S7 5183 aa2.23□□□□□ -2.05
PHC3-217ENST00000497658 M0R2T5 61 aa2.23□□□□□ -2.05
PHC3-217ENST00000497658 KRTAP19-8Q3LI54 63 aa2.23□□□□□ -2.05
PHC3-217ENST00000497658 KRTAP12-3P60328 96 aa2.22□□□□□ -2.05
PHC3-217ENST00000497658 KRTAP10-10P60014 251 aa2.21□□□□□ -2.06
PHC3-217ENST00000497658 LCE3CQ5T5A8 94 aa2.21□□□□□ -2.06
PHC3-217ENST00000497658 MT2AP02795 61 aa2.19□□□□□ -2.06
PHC3-217ENST00000497658 MT1HP80294 61 aa2.19□□□□□ -2.06
PHC3-217ENST00000497658 MT1FP04733 61 aa2.19□□□□□ -2.06
PHC3-217ENST00000497658 MT1XP80297 61 aa2.18□□□□□ -2.06
PHC3-217ENST00000497658 FAT4Q6V0I7 4981 aa2.18□□□□□ -2.06
PHC3-217ENST00000497658 MT1BP07438 61 aa2.16□□□□□ -2.06
PHC3-217ENST00000497658 HMCN2Q8NDA2 5059 aa2.16□□□□□ -2.06
PHC3-217ENST00000497658 KRTAP5-5Q701N2 237 aaPredicted RBP2.06□□□□□ -2.08
PHC3-217ENST00000497658 RNF213Q63HN8 5207 aa2.05□□□□□ -2.08
PHC3-217ENST00000497658 KRTAP19-5Q3LI72 72 aa2.05□□□□□ -2.08
PHC3-217ENST00000497658 AHNAKQ09666 5890 aaKnown RBP2.05□□□□□ -2.08
PHC3-217ENST00000497658 KRTAP2-3P0C7H8 128 aa2.03□□□□□ -2.08
PHC3-217ENST00000497658 KRTAP2-4Q9BYR9 128 aa2.03□□□□□ -2.08
PHC3-217ENST00000497658 KRTAP2-1Q9BYU5 128 aa2.03□□□□□ -2.08
PHC3-217ENST00000497658 LCE3EQ5T5B0 92 aa2□□□□□ -2.09
PHC3-217ENST00000497658 LCE1CQ5T751 118 aa1.98□□□□□ -2.09
PHC3-217ENST00000497658 LCE1BQ5T7P3 118 aa1.98□□□□□ -2.09
PHC3-217ENST00000497658 KRTAP19-7Q3SYF9 63 aa1.94□□□□□ -2.1
PHC3-217ENST00000497658 KMT2DO14686 5537 aa1.9□□□□□ -2.1
PHC3-217ENST00000497658 MT1LQ93083 61 aa1.9□□□□□ -2.11
PHC3-217ENST00000497658 MT1EP04732 61 aa1.88□□□□□ -2.11
PHC3-217ENST00000497658 USH2AO75445 5202 aa1.87□□□□□ -2.11
PHC3-217ENST00000497658 CRCT1Q9UGL9 99 aa1.81□□□□□ -2.12
PHC3-217ENST00000497658 KRTAP12-4P60329 112 aa1.81□□□□□ -2.12
PHC3-217ENST00000497658 MT1GP13640 62 aa1.78□□□□□ -2.13
PHC3-217ENST00000497658 KRTAP19-6Q3LI70 58 aa1.75□□□□□ -2.13
PHC3-217ENST00000497658 KRTAP19-3Q7Z4W3 81 aa1.75□□□□□ -2.13
PHC3-217ENST00000497658 MT1MQ8N339 61 aa1.75□□□□□ -2.13
PHC3-217ENST00000497658 FSIP2Q5CZC0 6907 aa1.74□□□□□ -2.13
PHC3-217ENST00000497658 SSPOA2VEC9 5147 aa1.74□□□□□ -2.13
PHC3-217ENST00000497658 MT1AP04731 61 aa1.72□□□□□ -2.13
PHC3-217ENST00000497658 MACF1Q9UPN3 7388 aaKnown RBP1.68□□□□□ -2.14
PHC3-217ENST00000497658 MUC19Q7Z5P9 8384 aa1.68□□□□□ -2.14
PHC3-217ENST00000497658 LCE3DQ9BYE3 92 aa1.65□□□□□ -2.14
PHC3-217ENST00000497658 AHNAK2Q8IVF2 5795 aa1.64□□□□□ -2.15
PHC3-217ENST00000497658 FCGBPQ9Y6R7 5405 aaPredicted RBP1.64□□□□□ -2.15
PHC3-217ENST00000497658 MUC12Q9UKN1 5478 aa1.63□□□□□ -2.15
PHC3-217ENST00000497658 SYNE1Q8NF91 8797 aaKnown RBP1.61□□□□□ -2.15
PHC3-217ENST00000497658 DSTQ03001 7570 aaKnown RBP1.6□□□□□ -2.15
PHC3-217ENST00000497658 KRTAP5-7Q6L8G8 165 aa1.6□□□□□ -2.15
PHC3-217ENST00000497658 PRM1P04553 51 aa1.59□□□□□ -2.15
PHC3-217ENST00000497658 KRTAP6-1Q3LI64 71 aa1.59□□□□□ -2.15
PHC3-217ENST00000497658 SPRR2FQ96RM1 72 aa1.59□□□□□ -2.16
PHC3-217ENST00000497658 NEBP20929 6669 aa1.57□□□□□ -2.16
PHC3-217ENST00000497658 KRTAP20-1Q3LI63 56 aa1.56□□□□□ -2.16
PHC3-217ENST00000497658 SYNE2Q8WXH0 6885 aaKnown RBP1.55□□□□□ -2.16
PHC3-217ENST00000497658 KRTAP6-2Q3LI66 62 aa1.51□□□□□ -2.17
PHC3-217ENST00000497658 KRTAP6-3Q3LI67 103 aa1.47□□□□□ -2.17
PHC3-217ENST00000497658 SPRR2AP35326 72 aa1.46□□□□□ -2.18
PHC3-217ENST00000497658 KRTAP21-2Q3LI59 83 aa1.44□□□□□ -2.18
PHC3-217ENST00000497658 MDN1Q9NU22 5596 aa1.44□□□□□ -2.18
PHC3-217ENST00000497658 SPRR2EP22531 72 aa1.41□□□□□ -2.18
PHC3-217ENST00000497658 SPRR2BP35325 72 aa1.4□□□□□ -2.19
PHC3-217ENST00000497658 SPRR2DP22532 72 aa1.34□□□□□ -2.19
PHC3-217ENST00000497658 MUC5ACP98088 5654 aa1.24□□□□□ -2.21
PHC3-217ENST00000497658 KRTAP5-10Q6L8G5 202 aa1.22□□□□□ -2.21
PHC3-217ENST00000497658 KRTAP20-2Q3LI61 65 aa1.2□□□□□ -2.22
PHC3-217ENST00000497658 MT4P47944 62 aa1.16□□□□□ -2.22
PHC3-217ENST00000497658 KRTAP21-1Q3LI58 79 aa1.05□□□□□ -2.24
PHC3-217ENST00000497658 PHGR1C9JFL3 82 aa0.8□□□□□ -2.28
PHC3-217ENST00000497658 MUC16Q8WXI7 14507 aa0.65□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 107.5 ms