RNA–Protein interactions for RNA: ENST00000497345.1

CMSS1-209, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-209ENST00000497345 LCE1BQ5T7P3 118 aa2.12□□□□□ -2.07
CMSS1-209ENST00000497345 CRIPTQ9P021 101 aa2.1□□□□□ -2.07
CMSS1-209ENST00000497345 K7ERS5 55 aa2.09□□□□□ -2.07
CMSS1-209ENST00000497345 KRTAP12-1P59990 96 aa2.09□□□□□ -2.07
CMSS1-209ENST00000497345 PRO0628Q9UI54 55 aa2.08□□□□□ -2.08
CMSS1-209ENST00000497345 PMAIP1Q13794 54 aa2.07□□□□□ -2.08
CMSS1-209ENST00000497345 CAMK2N1Q7Z7J9 78 aa2.07□□□□□ -2.08
CMSS1-209ENST00000497345 PLAC4Q8WY50 150 aa2.07□□□□□ -2.08
CMSS1-209ENST00000497345 SPRR2GQ9BYE4 73 aa2.06□□□□□ -2.08
CMSS1-209ENST00000497345 A6NN06 94 aa2.03□□□□□ -2.08
CMSS1-209ENST00000497345 MT1BP07438 61 aa2.02□□□□□ -2.09
CMSS1-209ENST00000497345 KRTAP19-8Q3LI54 63 aa2.01□□□□□ -2.09
CMSS1-209ENST00000497345 USH2AO75445 5202 aa2.01□□□□□ -2.09
CMSS1-209ENST00000497345 ROMO1P60602 79 aa2□□□□□ -2.09
CMSS1-209ENST00000497345 C10orf95Q9H7T3 257 aa2□□□□□ -2.09
CMSS1-209ENST00000497345 FSIP2Q5CZC0 6907 aa1.96□□□□□ -2.1
CMSS1-209ENST00000497345 MT1XP80297 61 aa1.95□□□□□ -2.1
CMSS1-209ENST00000497345 SSPOA2VEC9 5147 aa1.94□□□□□ -2.1
CMSS1-209ENST00000497345 PP632Q6XCG6 107 aa1.94□□□□□ -2.1
CMSS1-209ENST00000497345 KTN1-AS1Q86SY8 53 aa1.94□□□□□ -2.1
CMSS1-209ENST00000497345 LCE3DQ9BYE3 92 aa1.93□□□□□ -2.1
CMSS1-209ENST00000497345 PRO2289Q9P1D8 64 aa1.93□□□□□ -2.1
CMSS1-209ENST00000497345 TNP1P09430 55 aa1.92□□□□□ -2.1
CMSS1-209ENST00000497345 KRTAP25-1Q3LHN0 102 aa1.9□□□□□ -2.11
CMSS1-209ENST00000497345 KRTAP5-8O75690 187 aa1.88□□□□□ -2.11
CMSS1-209ENST00000497345 KRTAP19-6Q3LI70 58 aa1.88□□□□□ -2.11
CMSS1-209ENST00000497345 CRCT1Q9UGL9 99 aa1.87□□□□□ -2.11
CMSS1-209ENST00000497345 FCGBPQ9Y6R7 5405 aaPredicted RBP1.83□□□□□ -2.12
CMSS1-209ENST00000497345 KRTAP19-5Q3LI72 72 aa1.8□□□□□ -2.12
CMSS1-209ENST00000497345 KMT2DO14686 5537 aa1.79□□□□□ -2.12
CMSS1-209ENST00000497345 KRTAP8-1Q8IUC2 63 aa1.79□□□□□ -2.12
CMSS1-209ENST00000497345 SYNE2Q8WXH0 6885 aaKnown RBP1.78□□□□□ -2.13
CMSS1-209ENST00000497345 KRTAP12-3P60328 96 aa1.77□□□□□ -2.13
CMSS1-209ENST00000497345 MUC19Q7Z5P9 8384 aa1.76□□□□□ -2.13
CMSS1-209ENST00000497345 MACF1Q9UPN3 7388 aaKnown RBP1.75□□□□□ -2.13
CMSS1-209ENST00000497345 SPRR2FQ96RM1 72 aa1.74□□□□□ -2.13
CMSS1-209ENST00000497345 KRTAP19-7Q3SYF9 63 aa1.73□□□□□ -2.13
CMSS1-209ENST00000497345 KRTAP5-7Q6L8G8 165 aa1.73□□□□□ -2.13
CMSS1-209ENST00000497345 MT1EP04732 61 aa1.71□□□□□ -2.14
CMSS1-209ENST00000497345 MT1LQ93083 61 aa1.68□□□□□ -2.14
CMSS1-209ENST00000497345 SPRR2EP22531 72 aa1.66□□□□□ -2.14
CMSS1-209ENST00000497345 SPRR2BP35325 72 aa1.66□□□□□ -2.14
CMSS1-209ENST00000497345 SPRR2AP35326 72 aa1.66□□□□□ -2.14
CMSS1-209ENST00000497345 MUC12Q9UKN1 5478 aa1.66□□□□□ -2.14
CMSS1-209ENST00000497345 KRTAP6-3Q3LI67 103 aa1.65□□□□□ -2.15
CMSS1-209ENST00000497345 KRTAP19-3Q7Z4W3 81 aa1.64□□□□□ -2.15
CMSS1-209ENST00000497345 MT1MQ8N339 61 aa1.62□□□□□ -2.15
CMSS1-209ENST00000497345 NEBP20929 6669 aa1.61□□□□□ -2.15
CMSS1-209ENST00000497345 SPRR5A0A1B0GTR4 108 aa1.61□□□□□ -2.15
CMSS1-209ENST00000497345 MT1GP13640 62 aa1.61□□□□□ -2.15
CMSS1-209ENST00000497345 SPRR2DP22532 72 aa1.6□□□□□ -2.15
CMSS1-209ENST00000497345 LUZP6Q538Z0 58 aa1.58□□□□□ -2.16
CMSS1-209ENST00000497345 MDN1Q9NU22 5596 aa1.57□□□□□ -2.16
CMSS1-209ENST00000497345 GPR98Q8WXG9 6306 aa1.56□□□□□ -2.16
CMSS1-209ENST00000497345 KRTAP21-2Q3LI59 83 aa1.51□□□□□ -2.17
CMSS1-209ENST00000497345 DSTQ03001 7570 aaKnown RBP1.5□□□□□ -2.17
CMSS1-209ENST00000497345 KRTAP20-1Q3LI63 56 aa1.47□□□□□ -2.17
CMSS1-209ENST00000497345 KRTAP2-3P0C7H8 128 aa1.46□□□□□ -2.18
CMSS1-209ENST00000497345 KRTAP2-4Q9BYR9 128 aa1.46□□□□□ -2.18
CMSS1-209ENST00000497345 KRTAP6-1Q3LI64 71 aa1.43□□□□□ -2.18
CMSS1-209ENST00000497345 KRTAP2-1Q9BYU5 128 aa1.43□□□□□ -2.18
CMSS1-209ENST00000497345 MT1AP04731 61 aa1.42□□□□□ -2.18
CMSS1-209ENST00000497345 MT4P47944 62 aa1.42□□□□□ -2.18
CMSS1-209ENST00000497345 SYNE1Q8NF91 8797 aaKnown RBP1.37□□□□□ -2.19
CMSS1-209ENST00000497345 KRTAP12-4P60329 112 aa1.36□□□□□ -2.19
CMSS1-209ENST00000497345 KRTAP6-2Q3LI66 62 aa1.34□□□□□ -2.19
CMSS1-209ENST00000497345 KRTAP20-2Q3LI61 65 aa1.31□□□□□ -2.2
CMSS1-209ENST00000497345 HMCN1Q96RW7 5635 aa1.29□□□□□ -2.2
CMSS1-209ENST00000497345 AHNAK2Q8IVF2 5795 aa1.26□□□□□ -2.21
CMSS1-209ENST00000497345 AHNAKQ09666 5890 aaKnown RBP1.21□□□□□ -2.22
CMSS1-209ENST00000497345 INE1O15225 51 aa1.21□□□□□ -2.22
CMSS1-209ENST00000497345 MUC5BQ9HC84 5762 aaPredicted RBP1.19□□□□□ -2.22
CMSS1-209ENST00000497345 KRTAP5-10Q6L8G5 202 aa1.1□□□□□ -2.23
CMSS1-209ENST00000497345 PRM1P04553 51 aa1.07□□□□□ -2.24
CMSS1-209ENST00000497345 MUC5ACP98088 5654 aa1.06□□□□□ -2.24
CMSS1-209ENST00000497345 PHGR1C9JFL3 82 aa0.77□□□□□ -2.29
CMSS1-209ENST00000497345 MUC16Q8WXI7 14507 aa0.73□□□□□ -2.29
CMSS1-209ENST00000497345 KRTAP21-1Q3LI58 79 aa0.6□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 164.6 ms