RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 APOBP04114 4563 aaKnown RBP1.07□□□□□ -2.24
SNRNP48-202ENST00000496946 DNAH9Q9NYC9 4486 aa1.07□□□□□ -2.24
SNRNP48-202ENST00000496946 DNAH17Q9UFH2 4485 aa1.07□□□□□ -2.24
SNRNP48-202ENST00000496946 LYSTQ99698 3801 aa1.06□□□□□ -2.24
SNRNP48-202ENST00000496946 TNXBP22105 4242 aa1.06□□□□□ -2.24
SNRNP48-202ENST00000496946 NBEAL2Q6ZNJ1 2754 aa1.06□□□□□ -2.24
SNRNP48-202ENST00000496946 TRRAPQ9Y4A5 3859 aa1.06□□□□□ -2.24
SNRNP48-202ENST00000496946 ADGRG4Q8IZF6 3080 aa1.05□□□□□ -2.24
SNRNP48-202ENST00000496946 MXRA5Q9NR99 2828 aa1.05□□□□□ -2.24
SNRNP48-202ENST00000496946 FLNAP21333 2647 aaKnown RBP1.05□□□□□ -2.24
SNRNP48-202ENST00000496946 CSMD2Q7Z408 3487 aa1.05□□□□□ -2.24
SNRNP48-202ENST00000496946 MYO15AQ9UKN7 3530 aa1.04□□□□□ -2.24
SNRNP48-202ENST00000496946 VPS13BQ7Z7G8 4022 aa1.04□□□□□ -2.24
SNRNP48-202ENST00000496946 PKD1L1Q8TDX9 2849 aa1.04□□□□□ -2.24
SNRNP48-202ENST00000496946 KRTAP8-1Q8IUC2 63 aa1.04□□□□□ -2.24
SNRNP48-202ENST00000496946 ANK3Q12955 4377 aaKnown RBP1.04□□□□□ -2.24
SNRNP48-202ENST00000496946 CDH23Q9H251 3354 aa1.03□□□□□ -2.24
SNRNP48-202ENST00000496946 SYNE2Q8WXH0 6885 aaKnown RBP1.03□□□□□ -2.24
SNRNP48-202ENST00000496946 SVEP1Q4LDE5 3571 aa1.03□□□□□ -2.24
SNRNP48-202ENST00000496946 KRTAP12-3P60328 96 aa1.03□□□□□ -2.24
SNRNP48-202ENST00000496946 KRTAP10-4P60372 401 aaPredicted RBP1.02□□□□□ -2.25
SNRNP48-202ENST00000496946 MGAM2Q2M2H8 2515 aa1.01□□□□□ -2.25
SNRNP48-202ENST00000496946 HRNRQ86YZ3 2850 aaPredicted RBP1.01□□□□□ -2.25
SNRNP48-202ENST00000496946 ZNF469Q96JG9 3925 aaPredicted RBP1.01□□□□□ -2.25
SNRNP48-202ENST00000496946 CEP295Q9C0D2 2601 aa1.01□□□□□ -2.25
SNRNP48-202ENST00000496946 PKD1P98161 4303 aa1□□□□□ -2.25
SNRNP48-202ENST00000496946 LRP2P98164 4655 aa0.99□□□□□ -2.25
SNRNP48-202ENST00000496946 CUBNO60494 3623 aa0.99□□□□□ -2.25
SNRNP48-202ENST00000496946 VPS13CQ709C8 3753 aa0.98□□□□□ -2.25
SNRNP48-202ENST00000496946 RNF213Q63HN8 5207 aa0.97□□□□□ -2.25
SNRNP48-202ENST00000496946 KMT2DO14686 5537 aa0.97□□□□□ -2.25
SNRNP48-202ENST00000496946 DNAH5Q8TE73 4624 aa0.96□□□□□ -2.26
SNRNP48-202ENST00000496946 FLGP20930 4061 aaPredicted RBP0.96□□□□□ -2.26
SNRNP48-202ENST00000496946 SMR3BP02814 79 aaPredicted RBP0.95□□□□□ -2.26
SNRNP48-202ENST00000496946 KRTAP19-6Q3LI70 58 aa0.95□□□□□ -2.26
SNRNP48-202ENST00000496946 LRP1Q07954 4544 aaKnown RBP0.94□□□□□ -2.26
SNRNP48-202ENST00000496946 USH2AO75445 5202 aa0.94□□□□□ -2.26
SNRNP48-202ENST00000496946 KRTAP21-2Q3LI59 83 aa0.94□□□□□ -2.26
SNRNP48-202ENST00000496946 PRM1P04553 51 aa0.93□□□□□ -2.26
SNRNP48-202ENST00000496946 FAT1Q14517 4588 aa0.91□□□□□ -2.26
SNRNP48-202ENST00000496946 LPAP08519 4548 aa0.89□□□□□ -2.27
SNRNP48-202ENST00000496946 FSIP2Q5CZC0 6907 aa0.89□□□□□ -2.27
SNRNP48-202ENST00000496946 MUC17Q685J3 4493 aa0.88□□□□□ -2.27
SNRNP48-202ENST00000496946 KRTAP19-5Q3LI72 72 aa0.87□□□□□ -2.27
SNRNP48-202ENST00000496946 FCGBPQ9Y6R7 5405 aaPredicted RBP0.87□□□□□ -2.27
SNRNP48-202ENST00000496946 MDN1Q9NU22 5596 aa0.86□□□□□ -2.27
SNRNP48-202ENST00000496946 KRTAP4-1Q9BYQ7 146 aa0.83□□□□□ -2.28
SNRNP48-202ENST00000496946 MT1AP04731 61 aa0.82□□□□□ -2.28
SNRNP48-202ENST00000496946 SPRR2GQ9BYE4 73 aa0.8□□□□□ -2.28
SNRNP48-202ENST00000496946 MT1HL1P0DM35 61 aa0.79□□□□□ -2.28
SNRNP48-202ENST00000496946 SYNE1Q8NF91 8797 aaKnown RBP0.79□□□□□ -2.28
SNRNP48-202ENST00000496946 SPRR2DP22532 72 aa0.79□□□□□ -2.28
SNRNP48-202ENST00000496946 KRTAP6-2Q3LI66 62 aa0.78□□□□□ -2.29
SNRNP48-202ENST00000496946 SPRR2EP22531 72 aa0.77□□□□□ -2.29
SNRNP48-202ENST00000496946 SPRR2BP35325 72 aa0.77□□□□□ -2.29
SNRNP48-202ENST00000496946 SPRR2AP35326 72 aa0.77□□□□□ -2.29
SNRNP48-202ENST00000496946 KRTAP19-3Q7Z4W3 81 aa0.75□□□□□ -2.29
SNRNP48-202ENST00000496946 MT1XP80297 61 aa0.73□□□□□ -2.29
SNRNP48-202ENST00000496946 MT1EP04732 61 aa0.73□□□□□ -2.29
SNRNP48-202ENST00000496946 SPRR2FQ96RM1 72 aa0.73□□□□□ -2.29
SNRNP48-202ENST00000496946 MT1LQ93083 61 aa0.71□□□□□ -2.3
SNRNP48-202ENST00000496946 MT1HP80294 61 aa0.71□□□□□ -2.3
SNRNP48-202ENST00000496946 KRTAP19-8Q3LI54 63 aa0.71□□□□□ -2.3
SNRNP48-202ENST00000496946 KRTAP19-2Q3LHN2 52 aa0.7□□□□□ -2.3
SNRNP48-202ENST00000496946 KRTAP21-1Q3LI58 79 aa0.66□□□□□ -2.3
SNRNP48-202ENST00000496946 MT1BP07438 61 aa0.64□□□□□ -2.31
SNRNP48-202ENST00000496946 KRTAP19-7Q3SYF9 63 aa0.64□□□□□ -2.31
SNRNP48-202ENST00000496946 MT1GP13640 62 aa0.63□□□□□ -2.31
SNRNP48-202ENST00000496946 PHGR1C9JFL3 82 aa0.6□□□□□ -2.31
SNRNP48-202ENST00000496946 KRTAP20-2Q3LI61 65 aa0.59□□□□□ -2.32
SNRNP48-202ENST00000496946 MUC12Q9UKN1 5478 aa0.58□□□□□ -2.32
SNRNP48-202ENST00000496946 MT1FP04733 61 aa0.56□□□□□ -2.32
SNRNP48-202ENST00000496946 MT2AP02795 61 aa0.56□□□□□ -2.32
SNRNP48-202ENST00000496946 KRTAP6-1Q3LI64 71 aa0.55□□□□□ -2.32
SNRNP48-202ENST00000496946 MT1MQ8N339 61 aa0.55□□□□□ -2.32
SNRNP48-202ENST00000496946 MT4P47944 62 aa0.53□□□□□ -2.32
SNRNP48-202ENST00000496946 DSTQ03001 7570 aaKnown RBP0.52□□□□□ -2.33
SNRNP48-202ENST00000496946 MUC16Q8WXI7 14507 aa0.49□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 71.2 ms