RNA–Protein interactions for RNA: ENST00000496049.1

GAPDH-210, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 2

Gene GAPDH, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-210ENST00000496049 DSTQ03001 7570 aaKnown RBP5.85□□□□□ -1.47
GAPDH-210ENST00000496049 KRTAP8-1Q8IUC2 63 aa5.78□□□□□ -1.48
GAPDH-210ENST00000496049 KRTAP4-9Q9BYQ8 210 aa5.78□□□□□ -1.48
GAPDH-210ENST00000496049 KRTAP23-1A1A580 65 aa5.75□□□□□ -1.49
GAPDH-210ENST00000496049 KRTAP4-8A0A0G2JLE6 195 aa5.74□□□□□ -1.49
GAPDH-210ENST00000496049 LCE3AQ5TA76 89 aa5.74□□□□□ -1.49
GAPDH-210ENST00000496049 KRTAP4-8Q9BYQ9 185 aa5.74□□□□□ -1.49
GAPDH-210ENST00000496049 PP632Q6XCG6 107 aa5.73□□□□□ -1.49
GAPDH-210ENST00000496049 AHNAK2Q8IVF2 5795 aa5.7□□□□□ -1.5
GAPDH-210ENST00000496049 HMCN1Q96RW7 5635 aa5.68□□□□□ -1.5
GAPDH-210ENST00000496049 KTN1-AS1Q86SY8 53 aa5.66□□□□□ -1.5
GAPDH-210ENST00000496049 KRTAP19-5Q3LI72 72 aa5.58□□□□□ -1.52
GAPDH-210ENST00000496049 PRAC1Q96KF2 57 aa5.56□□□□□ -1.52
GAPDH-210ENST00000496049 KRTAP12-3P60328 96 aa5.55□□□□□ -1.52
GAPDH-210ENST00000496049 KRTAP19-7Q3SYF9 63 aa5.54□□□□□ -1.52
GAPDH-210ENST00000496049 KRTAP5-10Q6L8G5 202 aa5.53□□□□□ -1.52
GAPDH-210ENST00000496049 MT1EP04732 61 aa5.5□□□□□ -1.53
GAPDH-210ENST00000496049 LCE1DQ5T752 114 aa5.49□□□□□ -1.53
GAPDH-210ENST00000496049 SPRR5A0A1B0GTR4 108 aa5.43□□□□□ -1.54
GAPDH-210ENST00000496049 KRTAP5-7Q6L8G8 165 aa5.42□□□□□ -1.54
GAPDH-210ENST00000496049 SVIPQ8NHG7 77 aa5.39□□□□□ -1.55
GAPDH-210ENST00000496049 KRTAP15-1Q3LI76 137 aa5.37□□□□□ -1.55
GAPDH-210ENST00000496049 MT4P47944 62 aa5.36□□□□□ -1.55
GAPDH-210ENST00000496049 KRTAP19-3Q7Z4W3 81 aa5.35□□□□□ -1.55
GAPDH-210ENST00000496049 MT1LQ93083 61 aa5.34□□□□□ -1.55
GAPDH-210ENST00000496049 MT1GP13640 62 aa5.29□□□□□ -1.56
GAPDH-210ENST00000496049 KRTAP19-4Q3LI73 84 aa5.29□□□□□ -1.56
GAPDH-210ENST00000496049 LCE5AQ5TCM9 118 aa5.26□□□□□ -1.57
GAPDH-210ENST00000496049 KRTAP5-3Q6L8H2 238 aa5.2□□□□□ -1.58
GAPDH-210ENST00000496049 MT1MQ8N339 61 aa5.19□□□□□ -1.58
GAPDH-210ENST00000496049 LCE4AQ5TA78 99 aa5.17□□□□□ -1.58
GAPDH-210ENST00000496049 LCE3CQ5T5A8 94 aa5.15□□□□□ -1.59
GAPDH-210ENST00000496049 KRTAP4-6Q9BYQ5 205 aa5.08□□□□□ -1.6
GAPDH-210ENST00000496049 KRTAP4-7Q9BYR0 210 aa5.06□□□□□ -1.6
GAPDH-210ENST00000496049 AHNAKQ09666 5890 aaKnown RBP5.04□□□□□ -1.6
GAPDH-210ENST00000496049 KRTAP4-3Q9BYR4 195 aa5.01□□□□□ -1.61
GAPDH-210ENST00000496049 KRTAP5-4Q6L8H1 288 aa4.91□□□□□ -1.62
GAPDH-210ENST00000496049 MUC5ACP98088 5654 aa4.85□□□□□ -1.63
GAPDH-210ENST00000496049 MUC5BQ9HC84 5762 aaPredicted RBP4.8□□□□□ -1.64
GAPDH-210ENST00000496049 LOC100996750A0A140TA64 210 aa4.78□□□□□ -1.64
GAPDH-210ENST00000496049 KRTAP9-6A8MVA2 160 aa4.78□□□□□ -1.64
GAPDH-210ENST00000496049 KRTAP20-2Q3LI61 65 aa4.74□□□□□ -1.65
GAPDH-210ENST00000496049 LUZP6Q538Z0 58 aa4.72□□□□□ -1.65
GAPDH-210ENST00000496049 KRTAP5-5Q701N2 237 aaPredicted RBP4.68□□□□□ -1.66
GAPDH-210ENST00000496049 MT1AP04731 61 aa4.57□□□□□ -1.68
GAPDH-210ENST00000496049 KRTAP4-11Q9BYQ6 195 aa4.54□□□□□ -1.68
GAPDH-210ENST00000496049 KRTAP5-8O75690 187 aa4.5□□□□□ -1.69
GAPDH-210ENST00000496049 KRTAP12-4P60329 112 aa4.5□□□□□ -1.69
GAPDH-210ENST00000496049 KRTAP6-1Q3LI64 71 aa4.48□□□□□ -1.69
GAPDH-210ENST00000496049 SYNE1Q8NF91 8797 aaKnown RBP4.41□□□□□ -1.7
GAPDH-210ENST00000496049 KRTAP9-9Q9BYP9 154 aa4.35□□□□□ -1.71
GAPDH-210ENST00000496049 KRTAP9-4Q9BYQ2 154 aa4.35□□□□□ -1.71
GAPDH-210ENST00000496049 NDUFAF8A1L188 74 aa4.31□□□□□ -1.72
GAPDH-210ENST00000496049 KRTAP5-2Q701N4 177 aa4.21□□□□□ -1.74
GAPDH-210ENST00000496049 KRTAP6-2Q3LI66 62 aa4.19□□□□□ -1.74
GAPDH-210ENST00000496049 OBSCNQ5VST9 7968 aa4.19□□□□□ -1.74
GAPDH-210ENST00000496049 MT3P25713 68 aa4.17□□□□□ -1.74
GAPDH-210ENST00000496049 KRTAP5-1Q6L8H4 278 aa3.9□□□□□ -1.79
GAPDH-210ENST00000496049 LCE3DQ9BYE3 92 aa3.84□□□□□ -1.79
GAPDH-210ENST00000496049 A0A0A0MQY5 61 aa3.81□□□□□ -1.8
GAPDH-210ENST00000496049 LCE3EQ5T5B0 92 aa3.71□□□□□ -1.82
GAPDH-210ENST00000496049 LCE1EQ5T753 118 aa3.68□□□□□ -1.82
GAPDH-210ENST00000496049 INE1O15225 51 aa3.62□□□□□ -1.83
GAPDH-210ENST00000496049 LCE1BQ5T7P3 118 aa3.44□□□□□ -1.86
GAPDH-210ENST00000496049 LCE1CQ5T751 118 aa3.41□□□□□ -1.86
GAPDH-210ENST00000496049 KRTAP4-12Q9BQ66 201 aa3.41□□□□□ -1.86
GAPDH-210ENST00000496049 KRTAP4-2Q9BYR5 136 aa3.41□□□□□ -1.86
GAPDH-210ENST00000496049 H3BS24 57 aa3.32□□□□□ -1.88
GAPDH-210ENST00000496049 PHGR1C9JFL3 82 aa3.3□□□□□ -1.88
GAPDH-210ENST00000496049 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.16□□□□□ -1.9
GAPDH-210ENST00000496049 KRTAP5-11Q6L8G4 156 aa3.15□□□□□ -1.91
GAPDH-210ENST00000496049 PRM1P04553 51 aa3.11□□□□□ -1.91
GAPDH-210ENST00000496049 LCE1FQ5T754 118 aa3.01□□□□□ -1.93
GAPDH-210ENST00000496049 KRTAP21-2Q3LI59 83 aa2.93□□□□□ -1.94
GAPDH-210ENST00000496049 MUC19Q7Z5P9 8384 aa2.66□□□□□ -1.98
GAPDH-210ENST00000496049 KRTAP4-4Q9BYR3 166 aa2.6□□□□□ -1.99
GAPDH-210ENST00000496049 KRTAP21-1Q3LI58 79 aa2.47□□□□□ -2.01
GAPDH-210ENST00000496049 MUC16Q8WXI7 14507 aa1.81□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 61.9 ms