RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 TNP1P09430 55 aa4.55□□□□□ -1.68
PTPRF-214ENST00000496043 MIR22HGQ0VDD5 57 aa4.54□□□□□ -1.68
PTPRF-214ENST00000496043 MT1LQ93083 61 aa4.53□□□□□ -1.68
PTPRF-214ENST00000496043 C10orf95Q9H7T3 257 aa4.53□□□□□ -1.68
PTPRF-214ENST00000496043 MT1MQ8N339 61 aa4.52□□□□□ -1.69
PTPRF-214ENST00000496043 LCE3AQ5TA76 89 aa4.51□□□□□ -1.69
PTPRF-214ENST00000496043 A6NED7 52 aa4.49□□□□□ -1.69
PTPRF-214ENST00000496043 LCE4AQ5TA78 99 aa4.47□□□□□ -1.69
PTPRF-214ENST00000496043 LCE1DQ5T752 114 aa4.46□□□□□ -1.7
PTPRF-214ENST00000496043 GPR98Q8WXG9 6306 aa4.45□□□□□ -1.7
PTPRF-214ENST00000496043 MT4P47944 62 aa4.41□□□□□ -1.7
PTPRF-214ENST00000496043 KRTAP4-3Q9BYR4 195 aa4.41□□□□□ -1.7
PTPRF-214ENST00000496043 CDC42SE1Q9NRR8 79 aa4.37□□□□□ -1.71
PTPRF-214ENST00000496043 KRTAP12-3P60328 96 aa4.35□□□□□ -1.71
PTPRF-214ENST00000496043 KRTAP5-4Q6L8H1 288 aa4.35□□□□□ -1.71
PTPRF-214ENST00000496043 HMCN1Q96RW7 5635 aa4.34□□□□□ -1.71
PTPRF-214ENST00000496043 K7ERS5 55 aa4.32□□□□□ -1.72
PTPRF-214ENST00000496043 KRTAP4-7Q9BYR0 210 aa4.29□□□□□ -1.72
PTPRF-214ENST00000496043 KRTAP4-6Q9BYQ5 205 aa4.28□□□□□ -1.72
PTPRF-214ENST00000496043 KRTAP25-1Q3LHN0 102 aa4.25□□□□□ -1.73
PTPRF-214ENST00000496043 BRK1Q8WUW1 75 aa4.24□□□□□ -1.73
PTPRF-214ENST00000496043 AHNAK2Q8IVF2 5795 aa4.22□□□□□ -1.73
PTPRF-214ENST00000496043 KRTAP5-10Q6L8G5 202 aa4.17□□□□□ -1.74
PTPRF-214ENST00000496043 ROMO1P60602 79 aa4.15□□□□□ -1.75
PTPRF-214ENST00000496043 KRTAP19-4Q3LI73 84 aa4.15□□□□□ -1.75
PTPRF-214ENST00000496043 KRTAP5-5Q701N2 237 aaPredicted RBP4.13□□□□□ -1.75
PTPRF-214ENST00000496043 KRTAP20-2Q3LI61 65 aa4.11□□□□□ -1.75
PTPRF-214ENST00000496043 SPRR5A0A1B0GTR4 108 aa4.1□□□□□ -1.75
PTPRF-214ENST00000496043 KRTAP23-1A1A580 65 aa4.1□□□□□ -1.75
PTPRF-214ENST00000496043 KRTAP12-4P60329 112 aa4.1□□□□□ -1.75
PTPRF-214ENST00000496043 LOC100996750A0A140TA64 210 aa4.07□□□□□ -1.76
PTPRF-214ENST00000496043 KRTAP5-3Q6L8H2 238 aa4.07□□□□□ -1.76
PTPRF-214ENST00000496043 KRTAP15-1Q3LI76 137 aa4.05□□□□□ -1.76
PTPRF-214ENST00000496043 PRO0628Q9UI54 55 aa4.05□□□□□ -1.76
PTPRF-214ENST00000496043 KRTAP5-7Q6L8G8 165 aa4.03□□□□□ -1.76
PTPRF-214ENST00000496043 LCE3CQ5T5A8 94 aa4.01□□□□□ -1.77
PTPRF-214ENST00000496043 PMAIP1Q13794 54 aa3.98□□□□□ -1.77
PTPRF-214ENST00000496043 SYNE1Q8NF91 8797 aaKnown RBP3.94□□□□□ -1.78
PTPRF-214ENST00000496043 MT1AP04731 61 aa3.85□□□□□ -1.79
PTPRF-214ENST00000496043 PRAC1Q96KF2 57 aa3.83□□□□□ -1.8
PTPRF-214ENST00000496043 KRTAP6-1Q3LI64 71 aa3.82□□□□□ -1.8
PTPRF-214ENST00000496043 KRTAP5-2Q701N4 177 aa3.78□□□□□ -1.8
PTPRF-214ENST00000496043 KRTAP4-11Q9BYQ6 195 aa3.78□□□□□ -1.8
PTPRF-214ENST00000496043 KTN1-AS1Q86SY8 53 aa3.77□□□□□ -1.81
PTPRF-214ENST00000496043 KRTAP9-4Q9BYQ2 154 aa3.76□□□□□ -1.81
PTPRF-214ENST00000496043 KRTAP9-6A8MVA2 160 aa3.74□□□□□ -1.81
PTPRF-214ENST00000496043 KRTAP6-2Q3LI66 62 aa3.68□□□□□ -1.82
PTPRF-214ENST00000496043 KRTAP5-8O75690 187 aa3.64□□□□□ -1.83
PTPRF-214ENST00000496043 SVIPQ8NHG7 77 aa3.59□□□□□ -1.83
PTPRF-214ENST00000496043 MT3P25713 68 aa3.56□□□□□ -1.84
PTPRF-214ENST00000496043 AHNAKQ09666 5890 aaKnown RBP3.5□□□□□ -1.85
PTPRF-214ENST00000496043 KRTAP9-9Q9BYP9 154 aa3.5□□□□□ -1.85
PTPRF-214ENST00000496043 OBSCNQ5VST9 7968 aa3.48□□□□□ -1.85
PTPRF-214ENST00000496043 MUC5BQ9HC84 5762 aaPredicted RBP3.48□□□□□ -1.85
PTPRF-214ENST00000496043 MUC5ACP98088 5654 aa3.47□□□□□ -1.85
PTPRF-214ENST00000496043 KRTAP5-1Q6L8H4 278 aa3.41□□□□□ -1.86
PTPRF-214ENST00000496043 LCE1EQ5T753 118 aa3.28□□□□□ -1.88
PTPRF-214ENST00000496043 LCE1BQ5T7P3 118 aa3.09□□□□□ -1.91
PTPRF-214ENST00000496043 LUZP6Q538Z0 58 aa3.07□□□□□ -1.92
PTPRF-214ENST00000496043 KRTAP4-2Q9BYR5 136 aa3.07□□□□□ -1.92
PTPRF-214ENST00000496043 LCE1CQ5T751 118 aa3.03□□□□□ -1.92
PTPRF-214ENST00000496043 NDUFAF8A1L188 74 aa2.91□□□□□ -1.94
PTPRF-214ENST00000496043 LCE3DQ9BYE3 92 aa2.88□□□□□ -1.95
PTPRF-214ENST00000496043 KRTAP4-12Q9BQ66 201 aa2.83□□□□□ -1.96
PTPRF-214ENST00000496043 KRTAP5-11Q6L8G4 156 aa2.73□□□□□ -1.97
PTPRF-214ENST00000496043 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.73□□□□□ -1.97
PTPRF-214ENST00000496043 LCE3EQ5T5B0 92 aa2.71□□□□□ -1.98
PTPRF-214ENST00000496043 LCE1FQ5T754 118 aa2.71□□□□□ -1.98
PTPRF-214ENST00000496043 A0A0A0MQY5 61 aa2.57□□□□□ -2
PTPRF-214ENST00000496043 KRTAP21-2Q3LI59 83 aa2.52□□□□□ -2.01
PTPRF-214ENST00000496043 PHGR1C9JFL3 82 aa2.44□□□□□ -2.02
PTPRF-214ENST00000496043 H3BS24 57 aa2.42□□□□□ -2.02
PTPRF-214ENST00000496043 INE1O15225 51 aa2.42□□□□□ -2.02
PTPRF-214ENST00000496043 KRTAP4-4Q9BYR3 166 aa2.32□□□□□ -2.04
PTPRF-214ENST00000496043 PRM1P04553 51 aa2.17□□□□□ -2.06
PTPRF-214ENST00000496043 MUC19Q7Z5P9 8384 aa2.14□□□□□ -2.07
PTPRF-214ENST00000496043 KRTAP21-1Q3LI58 79 aa1.87□□□□□ -2.11
PTPRF-214ENST00000496043 MUC16Q8WXI7 14507 aa1.54□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 109.9 ms