RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 ADM2Q7Z4H4 148 aa2.83□□□□□ -1.96
VIM-207ENST00000495528 Q5VV11 94 aa2.82□□□□□ -1.96
VIM-207ENST00000495528 KRTAP19-8Q3LI54 63 aa2.81□□□□□ -1.96
VIM-207ENST00000495528 H0YAA0 97 aa2.79□□□□□ -1.96
VIM-207ENST00000495528 KRTAP2-3P0C7H8 128 aa2.79□□□□□ -1.96
VIM-207ENST00000495528 P0C880 135 aa2.79□□□□□ -1.96
VIM-207ENST00000495528 SPRR2GQ9BYE4 73 aa2.79□□□□□ -1.96
VIM-207ENST00000495528 KRTAP2-4Q9BYR9 128 aa2.79□□□□□ -1.96
VIM-207ENST00000495528 PMAIP1Q13794 54 aa2.77□□□□□ -1.97
VIM-207ENST00000495528 A0A1B0GU69 56 aa2.76□□□□□ -1.97
VIM-207ENST00000495528 BRK1Q8WUW1 75 aa2.76□□□□□ -1.97
VIM-207ENST00000495528 LINC01558Q9Y6Z2 57 aa2.75□□□□□ -1.97
VIM-207ENST00000495528 CRIPTQ9P021 101 aa2.74□□□□□ -1.97
VIM-207ENST00000495528 M0QZ58 72 aa2.72□□□□□ -1.97
VIM-207ENST00000495528 SPRR2EP22531 72 aa2.72□□□□□ -1.97
VIM-207ENST00000495528 SPRR2BP35325 72 aa2.72□□□□□ -1.97
VIM-207ENST00000495528 SPRR2AP35326 72 aa2.72□□□□□ -1.97
VIM-207ENST00000495528 SPRR2FQ96RM1 72 aa2.72□□□□□ -1.97
VIM-207ENST00000495528 PRR15LQ9BU68 103 aa2.72□□□□□ -1.97
VIM-207ENST00000495528 R4GN34 69 aa2.72□□□□□ -1.97
VIM-207ENST00000495528 A0A1B0GU33 70 aa2.71□□□□□ -1.98
VIM-207ENST00000495528 Q1T7F1 81 aa2.71□□□□□ -1.98
VIM-207ENST00000495528 PSPHP1O15172 72 aa2.7□□□□□ -1.98
VIM-207ENST00000495528 LINC01554Q52M75 96 aa2.7□□□□□ -1.98
VIM-207ENST00000495528 KRTAP2-1Q9BYU5 128 aa2.7□□□□□ -1.98
VIM-207ENST00000495528 SPATA8Q6RVD6 105 aa2.69□□□□□ -1.98
VIM-207ENST00000495528 KRTAP13-4Q3LI77 160 aa2.68□□□□□ -1.98
VIM-207ENST00000495528 KRTAP5-8O75690 187 aa2.66□□□□□ -1.98
VIM-207ENST00000495528 SPINT4Q6UDR6 99 aa2.66□□□□□ -1.98
VIM-207ENST00000495528 KTN1-AS1Q86SY8 53 aa2.66□□□□□ -1.98
VIM-207ENST00000495528 A0A0D9SG42 100 aa2.65□□□□□ -1.99
VIM-207ENST00000495528 KRTAP8-1Q8IUC2 63 aa2.65□□□□□ -1.99
VIM-207ENST00000495528 UQCR11O14957 56 aa2.64□□□□□ -1.99
VIM-207ENST00000495528 MT1XP80297 61 aa2.63□□□□□ -1.99
VIM-207ENST00000495528 PLAC4Q8WY50 150 aa2.63□□□□□ -1.99
VIM-207ENST00000495528 SPRR2DP22532 72 aa2.62□□□□□ -1.99
VIM-207ENST00000495528 A6NED7 52 aa2.61□□□□□ -1.99
VIM-207ENST00000495528 MIR22HGQ0VDD5 57 aa2.61□□□□□ -1.99
VIM-207ENST00000495528 PRO2289Q9P1D8 64 aa2.61□□□□□ -1.99
VIM-207ENST00000495528 LUZP6Q538Z0 58 aa2.59□□□□□ -1.99
VIM-207ENST00000495528 KRTAP12-1P59990 96 aa2.58□□□□□ -2
VIM-207ENST00000495528 CDC42SE1Q9NRR8 79 aa2.53□□□□□ -2
VIM-207ENST00000495528 GPR98Q8WXG9 6306 aa2.52□□□□□ -2.01
VIM-207ENST00000495528 K7ERS5 55 aa2.51□□□□□ -2.01
VIM-207ENST00000495528 KRTAP12-3P60328 96 aa2.5□□□□□ -2.01
VIM-207ENST00000495528 KRTAP5-7Q6L8G8 165 aa2.5□□□□□ -2.01
VIM-207ENST00000495528 DSTQ03001 7570 aaKnown RBP2.47□□□□□ -2.01
VIM-207ENST00000495528 C10orf95Q9H7T3 257 aa2.45□□□□□ -2.02
VIM-207ENST00000495528 MUC19Q7Z5P9 8384 aa2.44□□□□□ -2.02
VIM-207ENST00000495528 TNP1P09430 55 aa2.4□□□□□ -2.03
VIM-207ENST00000495528 KRTAP12-4P60329 112 aa2.39□□□□□ -2.03
VIM-207ENST00000495528 ROMO1P60602 79 aa2.39□□□□□ -2.03
VIM-207ENST00000495528 KRTAP19-7Q3SYF9 63 aa2.36□□□□□ -2.03
VIM-207ENST00000495528 KRTAP19-3Q7Z4W3 81 aa2.36□□□□□ -2.03
VIM-207ENST00000495528 KRTAP25-1Q3LHN0 102 aa2.35□□□□□ -2.03
VIM-207ENST00000495528 MT1EP04732 61 aa2.34□□□□□ -2.03
VIM-207ENST00000495528 HMCN1Q96RW7 5635 aa2.33□□□□□ -2.04
VIM-207ENST00000495528 MT4P47944 62 aa2.33□□□□□ -2.04
VIM-207ENST00000495528 KRTAP5-10Q6L8G5 202 aa2.29□□□□□ -2.04
VIM-207ENST00000495528 AHNAK2Q8IVF2 5795 aa2.28□□□□□ -2.04
VIM-207ENST00000495528 MT1GP13640 62 aa2.27□□□□□ -2.05
VIM-207ENST00000495528 KRTAP19-5Q3LI72 72 aa2.27□□□□□ -2.05
VIM-207ENST00000495528 MT1MQ8N339 61 aa2.24□□□□□ -2.05
VIM-207ENST00000495528 MT1LQ93083 61 aa2.21□□□□□ -2.06
VIM-207ENST00000495528 KRTAP21-2Q3LI59 83 aa2.15□□□□□ -2.07
VIM-207ENST00000495528 KRTAP20-2Q3LI61 65 aa2.13□□□□□ -2.07
VIM-207ENST00000495528 SYNE1Q8NF91 8797 aaKnown RBP2.01□□□□□ -2.09
VIM-207ENST00000495528 MUC5BQ9HC84 5762 aaPredicted RBP1.92□□□□□ -2.1
VIM-207ENST00000495528 AHNAKQ09666 5890 aaKnown RBP1.91□□□□□ -2.1
VIM-207ENST00000495528 MUC5ACP98088 5654 aa1.9□□□□□ -2.11
VIM-207ENST00000495528 KRTAP6-1Q3LI64 71 aa1.88□□□□□ -2.11
VIM-207ENST00000495528 INE1O15225 51 aa1.87□□□□□ -2.11
VIM-207ENST00000495528 MT1AP04731 61 aa1.87□□□□□ -2.11
VIM-207ENST00000495528 KRTAP6-2Q3LI66 62 aa1.83□□□□□ -2.12
VIM-207ENST00000495528 PHGR1C9JFL3 82 aa1.34□□□□□ -2.19
VIM-207ENST00000495528 PRM1P04553 51 aa1.24□□□□□ -2.21
VIM-207ENST00000495528 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
VIM-207ENST00000495528 KRTAP21-1Q3LI58 79 aa1.01□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 7.7 ms