RNA–Protein interactions for RNA: ENST00000495298.1

GTF3C2-213, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 2

Gene GTF3C2, Length 1,064 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-213ENST00000495298 MT1XP80297 61 aa3.98□□□□□ -1.77
GTF3C2-213ENST00000495298 SPATA8Q6RVD6 105 aa3.98□□□□□ -1.77
GTF3C2-213ENST00000495298 KRTAP8-1Q8IUC2 63 aa3.98□□□□□ -1.77
GTF3C2-213ENST00000495298 GPR98Q8WXG9 6306 aa3.96□□□□□ -1.78
GTF3C2-213ENST00000495298 UQCR11O14957 56 aa3.95□□□□□ -1.78
GTF3C2-213ENST00000495298 COA5Q86WW8 74 aa3.95□□□□□ -1.78
GTF3C2-213ENST00000495298 TP53AIP1Q9HCN2 124 aa3.93□□□□□ -1.78
GTF3C2-213ENST00000495298 CRIPTQ9P021 101 aa3.93□□□□□ -1.78
GTF3C2-213ENST00000495298 A0A1B0GU33 70 aa3.91□□□□□ -1.78
GTF3C2-213ENST00000495298 KRTAP15-1Q3LI76 137 aa3.9□□□□□ -1.79
GTF3C2-213ENST00000495298 KRTAP12-2P59991 146 aa3.88□□□□□ -1.79
GTF3C2-213ENST00000495298 PRO2289Q9P1D8 64 aa3.88□□□□□ -1.79
GTF3C2-213ENST00000495298 DSTQ03001 7570 aaKnown RBP3.85□□□□□ -1.79
GTF3C2-213ENST00000495298 KRTAP10-7P60409 375 aaPredicted RBP3.81□□□□□ -1.8
GTF3C2-213ENST00000495298 H0YAA0 97 aa3.8□□□□□ -1.8
GTF3C2-213ENST00000495298 ACYP2P14621 99 aa3.8□□□□□ -1.8
GTF3C2-213ENST00000495298 PLAC4Q8WY50 150 aa3.79□□□□□ -1.8
GTF3C2-213ENST00000495298 SPINT4Q6UDR6 99 aa3.77□□□□□ -1.81
GTF3C2-213ENST00000495298 A0A1B0GU69 56 aa3.74□□□□□ -1.81
GTF3C2-213ENST00000495298 KRTAP10-12P60413 245 aa3.74□□□□□ -1.81
GTF3C2-213ENST00000495298 R4GN34 69 aa3.69□□□□□ -1.82
GTF3C2-213ENST00000495298 M0QZ58 72 aa3.67□□□□□ -1.82
GTF3C2-213ENST00000495298 HMCN1Q96RW7 5635 aa3.58□□□□□ -1.84
GTF3C2-213ENST00000495298 KRTAP19-7Q3SYF9 63 aa3.57□□□□□ -1.84
GTF3C2-213ENST00000495298 AHNAK2Q8IVF2 5795 aa3.56□□□□□ -1.84
GTF3C2-213ENST00000495298 MT1EP04732 61 aa3.54□□□□□ -1.84
GTF3C2-213ENST00000495298 MT4P47944 62 aa3.54□□□□□ -1.84
GTF3C2-213ENST00000495298 KRTAP19-3Q7Z4W3 81 aa3.54□□□□□ -1.84
GTF3C2-213ENST00000495298 KRTAP5-10Q6L8G5 202 aa3.51□□□□□ -1.85
GTF3C2-213ENST00000495298 INE1O15225 51 aa3.49□□□□□ -1.85
GTF3C2-213ENST00000495298 KRTAP5-4Q6L8H1 288 aa3.4□□□□□ -1.87
GTF3C2-213ENST00000495298 MT1GP13640 62 aa3.39□□□□□ -1.87
GTF3C2-213ENST00000495298 KRTAP19-5Q3LI72 72 aa3.39□□□□□ -1.87
GTF3C2-213ENST00000495298 KRTAP5-7Q6L8G8 165 aa3.39□□□□□ -1.87
GTF3C2-213ENST00000495298 MT1MQ8N339 61 aa3.39□□□□□ -1.87
GTF3C2-213ENST00000495298 KRTAP13-4Q3LI77 160 aa3.38□□□□□ -1.87
GTF3C2-213ENST00000495298 KRTAP4-3Q9BYR4 195 aa3.38□□□□□ -1.87
GTF3C2-213ENST00000495298 PP632Q6XCG6 107 aa3.33□□□□□ -1.88
GTF3C2-213ENST00000495298 MT1LQ93083 61 aa3.33□□□□□ -1.88
GTF3C2-213ENST00000495298 A0A0D9SG42 100 aa3.31□□□□□ -1.88
GTF3C2-213ENST00000495298 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.29□□□□□ -1.88
GTF3C2-213ENST00000495298 SPRR5A0A1B0GTR4 108 aa3.25□□□□□ -1.89
GTF3C2-213ENST00000495298 KRTAP20-2Q3LI61 65 aa3.23□□□□□ -1.89
GTF3C2-213ENST00000495298 KRTAP5-11Q6L8G4 156 aa3.2□□□□□ -1.9
GTF3C2-213ENST00000495298 C10orf95Q9H7T3 257 aa3.18□□□□□ -1.9
GTF3C2-213ENST00000495298 LCE3AQ5TA76 89 aa3.16□□□□□ -1.9
GTF3C2-213ENST00000495298 KRTAP5-5Q701N2 237 aaPredicted RBP3.14□□□□□ -1.91
GTF3C2-213ENST00000495298 SYNE1Q8NF91 8797 aaKnown RBP3.12□□□□□ -1.91
GTF3C2-213ENST00000495298 KRTAP12-1P59990 96 aa3.11□□□□□ -1.91
GTF3C2-213ENST00000495298 KRTAP12-4P60329 112 aa3.05□□□□□ -1.92
GTF3C2-213ENST00000495298 KRTAP12-3P60328 96 aa2.99□□□□□ -1.93
GTF3C2-213ENST00000495298 TNP1P09430 55 aa2.98□□□□□ -1.93
GTF3C2-213ENST00000495298 MUC5ACP98088 5654 aa2.98□□□□□ -1.93
GTF3C2-213ENST00000495298 MUC5BQ9HC84 5762 aaPredicted RBP2.97□□□□□ -1.93
GTF3C2-213ENST00000495298 AHNAKQ09666 5890 aaKnown RBP2.97□□□□□ -1.93
GTF3C2-213ENST00000495298 LCE1EQ5T753 118 aa2.96□□□□□ -1.94
GTF3C2-213ENST00000495298 KRTAP5-8O75690 187 aa2.94□□□□□ -1.94
GTF3C2-213ENST00000495298 KRTAP5-2Q701N4 177 aa2.93□□□□□ -1.94
GTF3C2-213ENST00000495298 OBSCNQ5VST9 7968 aa2.9□□□□□ -1.95
GTF3C2-213ENST00000495298 KRTAP6-1Q3LI64 71 aa2.85□□□□□ -1.95
GTF3C2-213ENST00000495298 KRTAP5-1Q6L8H4 278 aa2.84□□□□□ -1.95
GTF3C2-213ENST00000495298 MT1AP04731 61 aa2.81□□□□□ -1.96
GTF3C2-213ENST00000495298 MT3P25713 68 aa2.78□□□□□ -1.96
GTF3C2-213ENST00000495298 KRTAP6-2Q3LI66 62 aa2.77□□□□□ -1.97
GTF3C2-213ENST00000495298 KRTAP4-4Q9BYR3 166 aa2.74□□□□□ -1.97
GTF3C2-213ENST00000495298 LCE3CQ5T5A8 94 aa2.73□□□□□ -1.97
GTF3C2-213ENST00000495298 KRTAP9-6A8MVA2 160 aa2.67□□□□□ -1.98
GTF3C2-213ENST00000495298 LCE1FQ5T754 118 aa2.55□□□□□ -2
GTF3C2-213ENST00000495298 LCE1BQ5T7P3 118 aa2.34□□□□□ -2.03
GTF3C2-213ENST00000495298 LCE1CQ5T751 118 aa2.24□□□□□ -2.05
GTF3C2-213ENST00000495298 LCE3EQ5T5B0 92 aa2.11□□□□□ -2.07
GTF3C2-213ENST00000495298 PHGR1C9JFL3 82 aa2.04□□□□□ -2.08
GTF3C2-213ENST00000495298 LCE3DQ9BYE3 92 aa2□□□□□ -2.09
GTF3C2-213ENST00000495298 KRTAP21-2Q3LI59 83 aa1.88□□□□□ -2.11
GTF3C2-213ENST00000495298 PRM1P04553 51 aa1.85□□□□□ -2.11
GTF3C2-213ENST00000495298 MUC19Q7Z5P9 8384 aa1.8□□□□□ -2.12
GTF3C2-213ENST00000495298 KRTAP21-1Q3LI58 79 aa1.52□□□□□ -2.17
GTF3C2-213ENST00000495298 MUC16Q8WXI7 14507 aa1.18□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 126.2 ms