RNA–Protein interactions for RNA: ENST00000494580.1

CTNNA3-204, Transcript of catenin alpha 3, humanhuman

TSL 3

Gene CTNNA3, Length 470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3-204ENST00000494580 LINC01554Q52M75 96 aa2.1□□□□□ -2.07
CTNNA3-204ENST00000494580 SERP1Q9Y6X1 66 aa2.1□□□□□ -2.07
CTNNA3-204ENST00000494580 R4GN34 69 aa2.09□□□□□ -2.07
CTNNA3-204ENST00000494580 PSPHP1O15172 72 aa2.08□□□□□ -2.08
CTNNA3-204ENST00000494580 KTN1-AS1Q86SY8 53 aa2.07□□□□□ -2.08
CTNNA3-204ENST00000494580 ATP5EP56381 51 aaPredicted RBP2.06□□□□□ -2.08
CTNNA3-204ENST00000494580 KRTAP6-3Q3LI67 103 aa2.06□□□□□ -2.08
CTNNA3-204ENST00000494580 SPATA8Q6RVD6 105 aa2.04□□□□□ -2.08
CTNNA3-204ENST00000494580 SPTSSBQ8NFR3 76 aa2.03□□□□□ -2.08
CTNNA3-204ENST00000494580 A0A0D9SG42 100 aa2.02□□□□□ -2.09
CTNNA3-204ENST00000494580 PLAC4Q8WY50 150 aa2.02□□□□□ -2.09
CTNNA3-204ENST00000494580 KRTAP12-1P59990 96 aa1.99□□□□□ -2.09
CTNNA3-204ENST00000494580 LCE3AQ5TA76 89 aa1.99□□□□□ -2.09
CTNNA3-204ENST00000494580 PRO2289Q9P1D8 64 aa1.98□□□□□ -2.09
CTNNA3-204ENST00000494580 A0A1B0GU33 70 aa1.97□□□□□ -2.09
CTNNA3-204ENST00000494580 KRTAP8-1Q8IUC2 63 aa1.97□□□□□ -2.09
CTNNA3-204ENST00000494580 SPRR2FQ96RM1 72 aa1.97□□□□□ -2.09
CTNNA3-204ENST00000494580 A0A1B0GU69 56 aa1.96□□□□□ -2.1
CTNNA3-204ENST00000494580 LUZP6Q538Z0 58 aa1.95□□□□□ -2.1
CTNNA3-204ENST00000494580 Q1T7F1 81 aa1.94□□□□□ -2.1
CTNNA3-204ENST00000494580 SPINT4Q6UDR6 99 aa1.94□□□□□ -2.1
CTNNA3-204ENST00000494580 LINC01558Q9Y6Z2 57 aa1.94□□□□□ -2.1
CTNNA3-204ENST00000494580 SPRR2EP22531 72 aa1.93□□□□□ -2.1
CTNNA3-204ENST00000494580 SPRR2BP35325 72 aa1.93□□□□□ -2.1
CTNNA3-204ENST00000494580 SPRR2AP35326 72 aa1.93□□□□□ -2.1
CTNNA3-204ENST00000494580 KRTAP5-8O75690 187 aa1.92□□□□□ -2.1
CTNNA3-204ENST00000494580 KRTAP19-7Q3SYF9 63 aa1.92□□□□□ -2.1
CTNNA3-204ENST00000494580 C10orf95Q9H7T3 257 aa1.92□□□□□ -2.1
CTNNA3-204ENST00000494580 PRR15LQ9BU68 103 aa1.91□□□□□ -2.1
CTNNA3-204ENST00000494580 A6NED7 52 aa1.89□□□□□ -2.11
CTNNA3-204ENST00000494580 MT1EP04732 61 aa1.89□□□□□ -2.11
CTNNA3-204ENST00000494580 KRTAP20-1Q3LI63 56 aa1.88□□□□□ -2.11
CTNNA3-204ENST00000494580 CDC42SE1Q9NRR8 79 aa1.88□□□□□ -2.11
CTNNA3-204ENST00000494580 DSTQ03001 7570 aaKnown RBP1.87□□□□□ -2.11
CTNNA3-204ENST00000494580 KRTAP19-5Q3LI72 72 aa1.87□□□□□ -2.11
CTNNA3-204ENST00000494580 K7ERS5 55 aa1.86□□□□□ -2.11
CTNNA3-204ENST00000494580 SPRR2DP22532 72 aa1.85□□□□□ -2.11
CTNNA3-204ENST00000494580 UQCR11O14957 56 aa1.83□□□□□ -2.12
CTNNA3-204ENST00000494580 MIR22HGQ0VDD5 57 aa1.83□□□□□ -2.12
CTNNA3-204ENST00000494580 KRTAP5-5Q701N2 237 aaPredicted RBP1.82□□□□□ -2.12
CTNNA3-204ENST00000494580 KRTAP19-3Q7Z4W3 81 aa1.82□□□□□ -2.12
CTNNA3-204ENST00000494580 GPR98Q8WXG9 6306 aa1.81□□□□□ -2.12
CTNNA3-204ENST00000494580 KRTAP2-3P0C7H8 128 aa1.81□□□□□ -2.12
CTNNA3-204ENST00000494580 MT1LQ93083 61 aa1.81□□□□□ -2.12
CTNNA3-204ENST00000494580 KRTAP2-4Q9BYR9 128 aa1.81□□□□□ -2.12
CTNNA3-204ENST00000494580 LCE3DQ9BYE3 92 aa1.8□□□□□ -2.12
CTNNA3-204ENST00000494580 MT1MQ8N339 61 aa1.79□□□□□ -2.12
CTNNA3-204ENST00000494580 TNP1P09430 55 aa1.78□□□□□ -2.12
CTNNA3-204ENST00000494580 ROMO1P60602 79 aa1.78□□□□□ -2.12
CTNNA3-204ENST00000494580 HMCN1Q96RW7 5635 aa1.77□□□□□ -2.13
CTNNA3-204ENST00000494580 PP632Q6XCG6 107 aa1.77□□□□□ -2.13
CTNNA3-204ENST00000494580 KRTAP2-1Q9BYU5 128 aa1.76□□□□□ -2.13
CTNNA3-204ENST00000494580 AHNAK2Q8IVF2 5795 aa1.74□□□□□ -2.13
CTNNA3-204ENST00000494580 KRTAP12-3P60328 96 aa1.74□□□□□ -2.13
CTNNA3-204ENST00000494580 MT1GP13640 62 aa1.73□□□□□ -2.13
CTNNA3-204ENST00000494580 LCE1CQ5T751 118 aa1.73□□□□□ -2.13
CTNNA3-204ENST00000494580 LCE1BQ5T7P3 118 aa1.73□□□□□ -2.13
CTNNA3-204ENST00000494580 KRTAP25-1Q3LHN0 102 aa1.72□□□□□ -2.13
CTNNA3-204ENST00000494580 SPRR5A0A1B0GTR4 108 aa1.71□□□□□ -2.14
CTNNA3-204ENST00000494580 SYNE1Q8NF91 8797 aaKnown RBP1.69□□□□□ -2.14
CTNNA3-204ENST00000494580 MT4P47944 62 aa1.65□□□□□ -2.15
CTNNA3-204ENST00000494580 KRTAP20-2Q3LI61 65 aa1.56□□□□□ -2.16
CTNNA3-204ENST00000494580 KRTAP6-1Q3LI64 71 aa1.55□□□□□ -2.16
CTNNA3-204ENST00000494580 MT1AP04731 61 aa1.52□□□□□ -2.17
CTNNA3-204ENST00000494580 KRTAP5-10Q6L8G5 202 aa1.51□□□□□ -2.17
CTNNA3-204ENST00000494580 KRTAP12-4P60329 112 aa1.47□□□□□ -2.17
CTNNA3-204ENST00000494580 MUC5ACP98088 5654 aa1.46□□□□□ -2.18
CTNNA3-204ENST00000494580 KRTAP6-2Q3LI66 62 aa1.45□□□□□ -2.18
CTNNA3-204ENST00000494580 MUC19Q7Z5P9 8384 aa1.44□□□□□ -2.18
CTNNA3-204ENST00000494580 INE1O15225 51 aa1.43□□□□□ -2.18
CTNNA3-204ENST00000494580 AHNAKQ09666 5890 aaKnown RBP1.42□□□□□ -2.18
CTNNA3-204ENST00000494580 KRTAP5-7Q6L8G8 165 aa1.41□□□□□ -2.18
CTNNA3-204ENST00000494580 MUC5BQ9HC84 5762 aaPredicted RBP1.4□□□□□ -2.19
CTNNA3-204ENST00000494580 KRTAP21-2Q3LI59 83 aa1.25□□□□□ -2.21
CTNNA3-204ENST00000494580 PRM1P04553 51 aa0.91□□□□□ -2.26
CTNNA3-204ENST00000494580 PHGR1C9JFL3 82 aa0.9□□□□□ -2.27
CTNNA3-204ENST00000494580 MUC16Q8WXI7 14507 aa0.68□□□□□ -2.3
CTNNA3-204ENST00000494580 KRTAP21-1Q3LI58 79 aa0.61□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 6.6 ms