RNA–Protein interactions for RNA: ENST00000494445.1

EIF4A2-223, Transcript of eukaryotic translation initiation factor 4A2, human

TSL 2

Gene EIF4A2, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EIF4A2-223	ENST00000494445	MT1E	P04732	61 aa		3.36	□□□□□ -1.87
EIF4A2-223	ENST00000494445	AHNAK2	Q8IVF2	5795 aa		3.35	□□□□□ -1.87
EIF4A2-223	ENST00000494445	MT4	P47944	62 aa		3.32	□□□□□ -1.88
EIF4A2-223	ENST00000494445	PRO0628	Q9UI54	55 aa		3.31	□□□□□ -1.88
EIF4A2-223	ENST00000494445	SMIM26	A0A096LP01	95 aa		3.3	□□□□□ -1.88
EIF4A2-223	ENST00000494445	KRTAP13-4	Q3LI77	160 aa		3.3	□□□□□ -1.88
EIF4A2-223	ENST00000494445	KRTAP5-10	Q6L8G5	202 aa		3.29	□□□□□ -1.88
EIF4A2-223	ENST00000494445	KRTAP5-1	Q6L8H4	278 aa		3.28	□□□□□ -1.88
EIF4A2-223	ENST00000494445	SERP1	Q9Y6X1	66 aa		3.28	□□□□□ -1.88
EIF4A2-223	ENST00000494445		A0A0D9SG42	100 aa		3.25	□□□□□ -1.89
EIF4A2-223	ENST00000494445	PSPHP1	O15172	72 aa		3.25	□□□□□ -1.89
EIF4A2-223	ENST00000494445	MT1G	P13640	62 aa		3.25	□□□□□ -1.89
EIF4A2-223	ENST00000494445	SPATA8	Q6RVD6	105 aa		3.25	□□□□□ -1.89
EIF4A2-223	ENST00000494445	ATP5E	P56381	51 aa	Predicted RBP	3.24	□□□□□ -1.89
EIF4A2-223	ENST00000494445		A0A1B0GU69	56 aa		3.23	□□□□□ -1.89
EIF4A2-223	ENST00000494445	KRTAP5-4	Q6L8H1	288 aa		3.23	□□□□□ -1.89
EIF4A2-223	ENST00000494445		A0A1B0GU33	70 aa		3.22	□□□□□ -1.89
EIF4A2-223	ENST00000494445	PP632	Q6XCG6	107 aa		3.22	□□□□□ -1.89
EIF4A2-223	ENST00000494445	CAMK2N1	Q7Z7J9	78 aa		3.22	□□□□□ -1.89
EIF4A2-223	ENST00000494445	MT1M	Q8N339	61 aa		3.22	□□□□□ -1.89
EIF4A2-223	ENST00000494445	TMEM258	P61165	79 aa		3.21	□□□□□ -1.9
EIF4A2-223	ENST00000494445	KRTAP19-5	Q3LI72	72 aa		3.21	□□□□□ -1.9
EIF4A2-223	ENST00000494445	KRTAP5-7	Q6L8G8	165 aa		3.21	□□□□□ -1.9
EIF4A2-223	ENST00000494445	PMAIP1	Q13794	54 aa		3.2	□□□□□ -1.9
EIF4A2-223	ENST00000494445	SPINT4	Q6UDR6	99 aa		3.18	□□□□□ -1.9
EIF4A2-223	ENST00000494445	KRTAP4-4	Q9BYR3	166 aa		3.18	□□□□□ -1.9
EIF4A2-223	ENST00000494445	MT1L	Q93083	61 aa		3.17	□□□□□ -1.9
EIF4A2-223	ENST00000494445	KRTAP4-3	Q9BYR4	195 aa		3.16	□□□□□ -1.9
EIF4A2-223	ENST00000494445		A8MU10	97 aa		3.15	□□□□□ -1.91
EIF4A2-223	ENST00000494445	PRR15L	Q9BU68	103 aa		3.14	□□□□□ -1.91
EIF4A2-223	ENST00000494445	KRTAP12-1	P59990	96 aa		3.13	□□□□□ -1.91
EIF4A2-223	ENST00000494445	LINC01558	Q9Y6Z2	57 aa		3.13	□□□□□ -1.91
EIF4A2-223	ENST00000494445	MT3	P25713	68 aa		3.12	□□□□□ -1.91
EIF4A2-223	ENST00000494445	NDUFAF8	A1L188	74 aa		3.07	□□□□□ -1.92
EIF4A2-223	ENST00000494445	KRTAP20-2	Q3LI61	65 aa		3.06	□□□□□ -1.92
EIF4A2-223	ENST00000494445	SPRR5	A0A1B0GTR4	108 aa		3.05	□□□□□ -1.92
EIF4A2-223	ENST00000494445	UQCR11	O14957	56 aa		3.04	□□□□□ -1.92
EIF4A2-223	ENST00000494445	C10orf95	Q9H7T3	257 aa		3.03	□□□□□ -1.92
EIF4A2-223	ENST00000494445	KRTAP9-6	A8MVA2	160 aa		3.02	□□□□□ -1.93
EIF4A2-223	ENST00000494445		K7ERS5	55 aa		3.01	□□□□□ -1.93
EIF4A2-223	ENST00000494445	LUZP6	Q538Z0	58 aa		3.01	□□□□□ -1.93
EIF4A2-223	ENST00000494445	LCE3A	Q5TA76	89 aa		3.01	□□□□□ -1.93
EIF4A2-223	ENST00000494445	MIR22HG	Q0VDD5	57 aa		3	□□□□□ -1.93
EIF4A2-223	ENST00000494445	RPS28	P62857	69 aa	Known RBP	2.99	□□□□□ -1.93
EIF4A2-223	ENST00000494445		Q1T7F1	81 aa		2.98	□□□□□ -1.93
EIF4A2-223	ENST00000494445	KRTAP5-5	Q701N2	237 aa	Predicted RBP	2.98	□□□□□ -1.93
EIF4A2-223	ENST00000494445	TNP1	P09430	55 aa		2.95	□□□□□ -1.94
EIF4A2-223	ENST00000494445	KTN1-AS1	Q86SY8	53 aa		2.94	□□□□□ -1.94
EIF4A2-223	ENST00000494445		A6NED7	52 aa		2.93	□□□□□ -1.94
EIF4A2-223	ENST00000494445	KRTAP12-4	P60329	112 aa		2.93	□□□□□ -1.94
EIF4A2-223	ENST00000494445	KRTAP12-3	P60328	96 aa		2.88	□□□□□ -1.95
EIF4A2-223	ENST00000494445	BRK1	Q8WUW1	75 aa		2.85	□□□□□ -1.95
EIF4A2-223	ENST00000494445	SYNE1	Q8NF91	8797 aa	Known RBP	2.84	□□□□□ -1.95
EIF4A2-223	ENST00000494445	LCE1F	Q5T754	118 aa		2.83	□□□□□ -1.96
EIF4A2-223	ENST00000494445	KRTAP25-1	Q3LHN0	102 aa		2.82	□□□□□ -1.96
EIF4A2-223	ENST00000494445	AHNAK	Q09666	5890 aa	Known RBP	2.81	□□□□□ -1.96
EIF4A2-223	ENST00000494445	OBSCN	Q5VST9	7968 aa		2.81	□□□□□ -1.96
EIF4A2-223	ENST00000494445	MUC5AC	P98088	5654 aa		2.8	□□□□□ -1.96
EIF4A2-223	ENST00000494445	KRTAP5-2	Q701N4	177 aa		2.79	□□□□□ -1.96
EIF4A2-223	ENST00000494445	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.78	□□□□□ -1.96
EIF4A2-223	ENST00000494445	CDC42SE1	Q9NRR8	79 aa		2.78	□□□□□ -1.96
EIF4A2-223	ENST00000494445	KRTAP5-8	O75690	187 aa		2.77	□□□□□ -1.97
EIF4A2-223	ENST00000494445	ROMO1	P60602	79 aa		2.73	□□□□□ -1.97
EIF4A2-223	ENST00000494445	MT1A	P04731	61 aa		2.69	□□□□□ -1.98
EIF4A2-223	ENST00000494445	KRTAP6-1	Q3LI64	71 aa		2.69	□□□□□ -1.98
EIF4A2-223	ENST00000494445	LCE3C	Q5T5A8	94 aa		2.64	□□□□□ -1.99
EIF4A2-223	ENST00000494445	KRTAP6-2	Q3LI66	62 aa		2.61	□□□□□ -1.99
EIF4A2-223	ENST00000494445	LCE3E	Q5T5B0	92 aa		2.4	□□□□□ -2.03
EIF4A2-223	ENST00000494445	LCE1C	Q5T751	118 aa		2.25	□□□□□ -2.05
EIF4A2-223	ENST00000494445	LCE1B	Q5T7P3	118 aa		2.25	□□□□□ -2.05
EIF4A2-223	ENST00000494445	INE1	O15225	51 aa		2.17	□□□□□ -2.06
EIF4A2-223	ENST00000494445	PHGR1	C9JFL3	82 aa		1.92	□□□□□ -2.1
EIF4A2-223	ENST00000494445	MUC19	Q7Z5P9	8384 aa		1.9	□□□□□ -2.11
EIF4A2-223	ENST00000494445	LCE3D	Q9BYE3	92 aa		1.87	□□□□□ -2.11
EIF4A2-223	ENST00000494445	KRTAP21-2	Q3LI59	83 aa		1.77	□□□□□ -2.13
EIF4A2-223	ENST00000494445	KRTAP21-1	Q3LI58	79 aa		1.47	□□□□□ -2.17
EIF4A2-223	ENST00000494445	PRM1	P04553	51 aa		1.43	□□□□□ -2.18
EIF4A2-223	ENST00000494445	MUC16	Q8WXI7	14507 aa		1.21	□□□□□ -2.22

Retrieved 78 of 20,778 RNA–protein pairs in 158 ms