RNA–Protein interactions for RNA: ENST00000494274.5

RBM39-239, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-239ENST00000494274 KRTAP2-3P0C7H8 128 aa2.87□□□□□ -1.95
RBM39-239ENST00000494274 KRTAP10-12P60413 245 aa2.87□□□□□ -1.95
RBM39-239ENST00000494274 KRTAP2-4Q9BYR9 128 aa2.87□□□□□ -1.95
RBM39-239ENST00000494274 A6NED7 52 aa2.86□□□□□ -1.95
RBM39-239ENST00000494274 CDC42SE1Q9NRR8 79 aa2.86□□□□□ -1.95
RBM39-239ENST00000494274 LCE1AQ5T7P2 110 aa2.85□□□□□ -1.95
RBM39-239ENST00000494274 SPATA8Q6RVD6 105 aa2.84□□□□□ -1.95
RBM39-239ENST00000494274 A0A1B0GU33 70 aa2.83□□□□□ -1.96
RBM39-239ENST00000494274 SPRR2DP22532 72 aa2.82□□□□□ -1.96
RBM39-239ENST00000494274 SPINT4Q6UDR6 99 aa2.82□□□□□ -1.96
RBM39-239ENST00000494274 UQCR11O14957 56 aa2.81□□□□□ -1.96
RBM39-239ENST00000494274 MIR22HGQ0VDD5 57 aa2.79□□□□□ -1.96
RBM39-239ENST00000494274 KRTAP2-2Q9BYT5 123 aa2.78□□□□□ -1.96
RBM39-239ENST00000494274 KRTAP2-1Q9BYU5 128 aa2.78□□□□□ -1.96
RBM39-239ENST00000494274 NDUFAF8A1L188 74 aa2.75□□□□□ -1.97
RBM39-239ENST00000494274 KRTAP12-1P59990 96 aa2.75□□□□□ -1.97
RBM39-239ENST00000494274 PMAIP1Q13794 54 aa2.75□□□□□ -1.97
RBM39-239ENST00000494274 KRTAP19-7Q3SYF9 63 aa2.7□□□□□ -1.98
RBM39-239ENST00000494274 MT1EP04732 61 aa2.69□□□□□ -1.98
RBM39-239ENST00000494274 KRTAP19-5Q3LI72 72 aa2.67□□□□□ -1.98
RBM39-239ENST00000494274 KTN1-AS1Q86SY8 53 aa2.67□□□□□ -1.98
RBM39-239ENST00000494274 KRTAP19-3Q7Z4W3 81 aa2.66□□□□□ -1.98
RBM39-239ENST00000494274 C10orf95Q9H7T3 257 aa2.64□□□□□ -1.99
RBM39-239ENST00000494274 TNP1P09430 55 aa2.63□□□□□ -1.99
RBM39-239ENST00000494274 LCE3AQ5TA76 89 aa2.61□□□□□ -1.99
RBM39-239ENST00000494274 DSTQ03001 7570 aaKnown RBP2.6□□□□□ -1.99
RBM39-239ENST00000494274 MT1GP13640 62 aa2.6□□□□□ -1.99
RBM39-239ENST00000494274 KRTAP5-3Q6L8H2 238 aa2.59□□□□□ -1.99
RBM39-239ENST00000494274 PP632Q6XCG6 107 aa2.59□□□□□ -1.99
RBM39-239ENST00000494274 K7ERS5 55 aa2.58□□□□□ -2
RBM39-239ENST00000494274 MT1LQ93083 61 aa2.58□□□□□ -2
RBM39-239ENST00000494274 ROMO1P60602 79 aa2.56□□□□□ -2
RBM39-239ENST00000494274 MT1MQ8N339 61 aa2.55□□□□□ -2
RBM39-239ENST00000494274 MT3P25713 68 aa2.53□□□□□ -2
RBM39-239ENST00000494274 KRTAP4-3Q9BYR4 195 aa2.53□□□□□ -2
RBM39-239ENST00000494274 KRTAP25-1Q3LHN0 102 aa2.52□□□□□ -2.01
RBM39-239ENST00000494274 KRTAP12-3P60328 96 aa2.51□□□□□ -2.01
RBM39-239ENST00000494274 MT4P47944 62 aa2.48□□□□□ -2.01
RBM39-239ENST00000494274 GPR98Q8WXG9 6306 aa2.43□□□□□ -2.02
RBM39-239ENST00000494274 KRTAP5-4Q6L8H1 288 aa2.4□□□□□ -2.03
RBM39-239ENST00000494274 HMCN1Q96RW7 5635 aa2.38□□□□□ -2.03
RBM39-239ENST00000494274 LUZP6Q538Z0 58 aa2.36□□□□□ -2.03
RBM39-239ENST00000494274 KRTAP5-5Q701N2 237 aaPredicted RBP2.32□□□□□ -2.04
RBM39-239ENST00000494274 LCE3CQ5T5A8 94 aa2.31□□□□□ -2.04
RBM39-239ENST00000494274 KRTAP12-4P60329 112 aa2.3□□□□□ -2.04
RBM39-239ENST00000494274 LCE1FQ5T754 118 aa2.3□□□□□ -2.04
RBM39-239ENST00000494274 KRTAP20-2Q3LI61 65 aa2.29□□□□□ -2.04
RBM39-239ENST00000494274 SPRR5A0A1B0GTR4 108 aa2.27□□□□□ -2.05
RBM39-239ENST00000494274 KRTAP5-10Q6L8G5 202 aa2.27□□□□□ -2.05
RBM39-239ENST00000494274 AHNAK2Q8IVF2 5795 aa2.26□□□□□ -2.05
RBM39-239ENST00000494274 SYNE1Q8NF91 8797 aaKnown RBP2.24□□□□□ -2.05
RBM39-239ENST00000494274 MT1AP04731 61 aa2.18□□□□□ -2.06
RBM39-239ENST00000494274 KRTAP6-1Q3LI64 71 aa2.18□□□□□ -2.06
RBM39-239ENST00000494274 KRTAP9-6A8MVA2 160 aa2.17□□□□□ -2.06
RBM39-239ENST00000494274 KRTAP5-7Q6L8G8 165 aa2.17□□□□□ -2.06
RBM39-239ENST00000494274 KRTAP6-2Q3LI66 62 aa2.09□□□□□ -2.07
RBM39-239ENST00000494274 KRTAP5-2Q701N4 177 aa2.09□□□□□ -2.07
RBM39-239ENST00000494274 OBSCNQ5VST9 7968 aa2.02□□□□□ -2.09
RBM39-239ENST00000494274 KRTAP5-8O75690 187 aa2.01□□□□□ -2.09
RBM39-239ENST00000494274 KRTAP5-11Q6L8G4 156 aa1.98□□□□□ -2.09
RBM39-239ENST00000494274 LCE1EQ5T753 118 aa1.96□□□□□ -2.1
RBM39-239ENST00000494274 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.96□□□□□ -2.1
RBM39-239ENST00000494274 LCE3EQ5T5B0 92 aa1.92□□□□□ -2.1
RBM39-239ENST00000494274 KRTAP5-1Q6L8H4 278 aa1.9□□□□□ -2.11
RBM39-239ENST00000494274 MUC5BQ9HC84 5762 aaPredicted RBP1.88□□□□□ -2.11
RBM39-239ENST00000494274 AHNAKQ09666 5890 aaKnown RBP1.87□□□□□ -2.11
RBM39-239ENST00000494274 MUC5ACP98088 5654 aa1.86□□□□□ -2.11
RBM39-239ENST00000494274 LCE1BQ5T7P3 118 aa1.77□□□□□ -2.13
RBM39-239ENST00000494274 INE1O15225 51 aa1.7□□□□□ -2.14
RBM39-239ENST00000494274 LCE3DQ9BYE3 92 aa1.7□□□□□ -2.14
RBM39-239ENST00000494274 LCE1CQ5T751 118 aa1.69□□□□□ -2.14
RBM39-239ENST00000494274 KRTAP4-4Q9BYR3 166 aa1.63□□□□□ -2.15
RBM39-239ENST00000494274 KRTAP21-2Q3LI59 83 aa1.43□□□□□ -2.18
RBM39-239ENST00000494274 PRM1P04553 51 aa1.36□□□□□ -2.19
RBM39-239ENST00000494274 PHGR1C9JFL3 82 aa1.35□□□□□ -2.19
RBM39-239ENST00000494274 MUC19Q7Z5P9 8384 aa1.24□□□□□ -2.21
RBM39-239ENST00000494274 KRTAP21-1Q3LI58 79 aa1.01□□□□□ -2.25
RBM39-239ENST00000494274 MUC16Q8WXI7 14507 aa0.82□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 70.8 ms