RNA–Protein interactions for RNA: ENST00000493960.6

FAM208A-209, Transcript of family with sequence similarity 208 member A, humanhuman

APPRIS P2 TSL 5 BASIC

Gene FAM208A, Length 5,600 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM208A-209ENST00000493960 ABCA13Q86UQ4 5058 aa5.31□□□□□ -1.56
FAM208A-209ENST00000493960 MT4P47944 62 aa5.31□□□□□ -1.56
FAM208A-209ENST00000493960 LCE2AQ5TA79 106 aaPredicted RBP5.3□□□□□ -1.56
FAM208A-209ENST00000493960 LOC100996750A0A140TA64 210 aa5.25□□□□□ -1.57
FAM208A-209ENST00000493960 KRTAP4-3Q9BYR4 195 aa5.22□□□□□ -1.57
FAM208A-209ENST00000493960 KRTAP19-7Q3SYF9 63 aa5.18□□□□□ -1.58
FAM208A-209ENST00000493960 KRTAP9-6A0A140TA67 174 aa5.15□□□□□ -1.58
FAM208A-209ENST00000493960 MT1AP04731 61 aa5.12□□□□□ -1.59
FAM208A-209ENST00000493960 RNF213Q63HN8 5207 aa5.12□□□□□ -1.59
FAM208A-209ENST00000493960 FAT4Q6V0I7 4981 aa5.1□□□□□ -1.59
FAM208A-209ENST00000493960 PRM1P04553 51 aa5.09□□□□□ -1.59
FAM208A-209ENST00000493960 LCE1BQ5T7P3 118 aa5.06□□□□□ -1.6
FAM208A-209ENST00000493960 LCE1DQ5T752 114 aa5.05□□□□□ -1.6
FAM208A-209ENST00000493960 HMCN2Q8NDA2 5059 aa4.98□□□□□ -1.61
FAM208A-209ENST00000493960 LCE1AQ5T7P2 110 aa4.95□□□□□ -1.62
FAM208A-209ENST00000493960 KRTAP2-3P0C7H8 128 aa4.94□□□□□ -1.62
FAM208A-209ENST00000493960 KRTAP20-1Q3LI63 56 aa4.94□□□□□ -1.62
FAM208A-209ENST00000493960 KRTAP2-4Q9BYR9 128 aa4.94□□□□□ -1.62
FAM208A-209ENST00000493960 KRTAP2-1Q9BYU5 128 aa4.94□□□□□ -1.62
FAM208A-209ENST00000493960 UBR4Q5T4S7 5183 aa4.94□□□□□ -1.62
FAM208A-209ENST00000493960 KRTAP6-3Q3LI67 103 aa4.91□□□□□ -1.62
FAM208A-209ENST00000493960 KRTAP9-7A8MTY7 169 aa4.86□□□□□ -1.63
FAM208A-209ENST00000493960 KRTAP4-9Q9BYQ8 210 aa4.82□□□□□ -1.64
FAM208A-209ENST00000493960 SYNE1Q8NF91 8797 aaKnown RBP4.81□□□□□ -1.64
FAM208A-209ENST00000493960 FSIP2Q5CZC0 6907 aa4.78□□□□□ -1.64
FAM208A-209ENST00000493960 LCE5AQ5TCM9 118 aa4.76□□□□□ -1.65
FAM208A-209ENST00000493960 KRTAP6-1Q3LI64 71 aa4.74□□□□□ -1.65
FAM208A-209ENST00000493960 LCE4AQ5TA78 99 aa4.73□□□□□ -1.65
FAM208A-209ENST00000493960 MUC2Q02817 5179 aa4.73□□□□□ -1.65
FAM208A-209ENST00000493960 KRTAP9-4Q9BYQ2 154 aa4.72□□□□□ -1.65
FAM208A-209ENST00000493960 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.71□□□□□ -1.65
FAM208A-209ENST00000493960 KRTAP6-2Q3LI66 62 aa4.69□□□□□ -1.66
FAM208A-209ENST00000493960 SYNE2Q8WXH0 6885 aaKnown RBP4.68□□□□□ -1.66
FAM208A-209ENST00000493960 KRTAP9-6A8MVA2 160 aa4.64□□□□□ -1.67
FAM208A-209ENST00000493960 KRTAP2-2Q9BYT5 123 aa4.62□□□□□ -1.67
FAM208A-209ENST00000493960 OBSCNQ5VST9 7968 aa4.46□□□□□ -1.69
FAM208A-209ENST00000493960 LCE1CQ5T751 118 aa4.3□□□□□ -1.72
FAM208A-209ENST00000493960 LCE1EQ5T753 118 aa4.3□□□□□ -1.72
FAM208A-209ENST00000493960 LCE1FQ5T754 118 aa4.3□□□□□ -1.72
FAM208A-209ENST00000493960 USH2AO75445 5202 aa4.2□□□□□ -1.74
FAM208A-209ENST00000493960 KRTAP5-9P26371 169 aa4.17□□□□□ -1.74
FAM208A-209ENST00000493960 KRTAP9-9Q9BYP9 154 aa4.08□□□□□ -1.76
FAM208A-209ENST00000493960 FCGBPQ9Y6R7 5405 aaPredicted RBP4.04□□□□□ -1.76
FAM208A-209ENST00000493960 NEBP20929 6669 aa4□□□□□ -1.77
FAM208A-209ENST00000493960 SSPOA2VEC9 5147 aa3.95□□□□□ -1.78
FAM208A-209ENST00000493960 KRTAP20-2Q3LI61 65 aa3.93□□□□□ -1.78
FAM208A-209ENST00000493960 KRTAP4-6Q9BYQ5 205 aa3.93□□□□□ -1.78
FAM208A-209ENST00000493960 MACF1Q9UPN3 7388 aaKnown RBP3.92□□□□□ -1.78
FAM208A-209ENST00000493960 DSTQ03001 7570 aaKnown RBP3.87□□□□□ -1.79
FAM208A-209ENST00000493960 KMT2DO14686 5537 aa3.85□□□□□ -1.79
FAM208A-209ENST00000493960 KRTAP4-11Q9BYQ6 195 aa3.73□□□□□ -1.81
FAM208A-209ENST00000493960 KRTAP5-4Q6L8H1 288 aa3.7□□□□□ -1.82
FAM208A-209ENST00000493960 MUC12Q9UKN1 5478 aa3.61□□□□□ -1.83
FAM208A-209ENST00000493960 MDN1Q9NU22 5596 aa3.59□□□□□ -1.84
FAM208A-209ENST00000493960 KRTAP4-4Q9BYR3 166 aa3.48□□□□□ -1.85
FAM208A-209ENST00000493960 KRTAP5-5Q701N2 237 aaPredicted RBP3.47□□□□□ -1.85
FAM208A-209ENST00000493960 KRTAP4-12Q9BQ66 201 aa3.47□□□□□ -1.85
FAM208A-209ENST00000493960 KRTAP4-2Q9BYR5 136 aa3.47□□□□□ -1.85
FAM208A-209ENST00000493960 MUC19Q7Z5P9 8384 aa3.45□□□□□ -1.86
FAM208A-209ENST00000493960 GPR98Q8WXG9 6306 aa3.4□□□□□ -1.86
FAM208A-209ENST00000493960 KRTAP5-3Q6L8H2 238 aa3.22□□□□□ -1.89
FAM208A-209ENST00000493960 MUC5ACP98088 5654 aa3.02□□□□□ -1.93
FAM208A-209ENST00000493960 AHNAK2Q8IVF2 5795 aa2.96□□□□□ -1.94
FAM208A-209ENST00000493960 KRTAP5-8O75690 187 aa2.91□□□□□ -1.94
FAM208A-209ENST00000493960 KRTAP5-2Q701N4 177 aa2.86□□□□□ -1.95
FAM208A-209ENST00000493960 HMCN1Q96RW7 5635 aa2.86□□□□□ -1.95
FAM208A-209ENST00000493960 KRTAP5-10Q6L8G5 202 aa2.8□□□□□ -1.96
FAM208A-209ENST00000493960 PHGR1C9JFL3 82 aa2.63□□□□□ -1.99
FAM208A-209ENST00000493960 MUC5BQ9HC84 5762 aaPredicted RBP2.63□□□□□ -1.99
FAM208A-209ENST00000493960 KRTAP5-11Q6L8G4 156 aa2.59□□□□□ -1.99
FAM208A-209ENST00000493960 KRTAP5-1Q6L8H4 278 aa2.5□□□□□ -2.01
FAM208A-209ENST00000493960 AHNAKQ09666 5890 aaKnown RBP2.45□□□□□ -2.02
FAM208A-209ENST00000493960 KRTAP21-2Q3LI59 83 aa2.4□□□□□ -2.02
FAM208A-209ENST00000493960 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.28□□□□□ -2.04
FAM208A-209ENST00000493960 KRTAP21-1Q3LI58 79 aa2.15□□□□□ -2.07
FAM208A-209ENST00000493960 KRTAP5-7Q6L8G8 165 aa2.11□□□□□ -2.07
FAM208A-209ENST00000493960 MUC16Q8WXI7 14507 aa1.54□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 6.1 ms