RNA–Protein interactions for RNA: ENST00000493805.6

ACSS2-222, Transcript of acyl-CoA synthetase short chain family member 2, human

TSL 4

Gene ACSS2, Length 603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACSS2-222	ENST00000493805	LCE5A	Q5TCM9	118 aa		7.32	□□□□□ -1.24
ACSS2-222	ENST00000493805	KRTAP19-3	Q7Z4W3	81 aa		7.31	□□□□□ -1.24
ACSS2-222	ENST00000493805	KRTAP25-1	Q3LHN0	102 aa		7.2	□□□□□ -1.26
ACSS2-222	ENST00000493805	MT1G	P13640	62 aa		7.18	□□□□□ -1.26
ACSS2-222	ENST00000493805	MT1L	Q93083	61 aa		7.17	□□□□□ -1.26
ACSS2-222	ENST00000493805	CDC42SE1	Q9NRR8	79 aa		7.14	□□□□□ -1.27
ACSS2-222	ENST00000493805	KRTAP12-3	P60328	96 aa		7.09	□□□□□ -1.27
ACSS2-222	ENST00000493805	DST	Q03001	7570 aa	Known RBP	7.09	□□□□□ -1.27
ACSS2-222	ENST00000493805	MT1M	Q8N339	61 aa		7.07	□□□□□ -1.28
ACSS2-222	ENST00000493805	PP632	Q6XCG6	107 aa		7.06	□□□□□ -1.28
ACSS2-222	ENST00000493805	KRTAP23-1	A1A580	65 aa		6.98	□□□□□ -1.29
ACSS2-222	ENST00000493805	ROMO1	P60602	79 aa		6.97	□□□□□ -1.29
ACSS2-222	ENST00000493805	KRTAP4-3	Q9BYR4	195 aa		6.92	□□□□□ -1.3
ACSS2-222	ENST00000493805	GPR98	Q8WXG9	6306 aa		6.85	□□□□□ -1.31
ACSS2-222	ENST00000493805	KRTAP4-7	Q9BYR0	210 aa		6.85	□□□□□ -1.31
ACSS2-222	ENST00000493805	KRTAP4-9	Q9BYQ8	210 aa		6.79	□□□□□ -1.32
ACSS2-222	ENST00000493805	KRTAP15-1	Q3LI76	137 aa		6.73	□□□□□ -1.33
ACSS2-222	ENST00000493805	BRK1	Q8WUW1	75 aa		6.73	□□□□□ -1.33
ACSS2-222	ENST00000493805	KRTAP19-4	Q3LI73	84 aa		6.71	□□□□□ -1.34
ACSS2-222	ENST00000493805	LCE4A	Q5TA78	99 aa		6.71	□□□□□ -1.34
ACSS2-222	ENST00000493805	LCE1D	Q5T752	114 aa		6.68	□□□□□ -1.34
ACSS2-222	ENST00000493805	HMCN1	Q96RW7	5635 aa		6.62	□□□□□ -1.35
ACSS2-222	ENST00000493805	KRTAP5-4	Q6L8H1	288 aa		6.6	□□□□□ -1.35
ACSS2-222	ENST00000493805	LCE3C	Q5T5A8	94 aa		6.57	□□□□□ -1.36
ACSS2-222	ENST00000493805	MT4	P47944	62 aa		6.52	□□□□□ -1.37
ACSS2-222	ENST00000493805	KRTAP5-5	Q701N2	237 aa	Predicted RBP	6.48	□□□□□ -1.37
ACSS2-222	ENST00000493805	LOC100996750	A0A140TA64	210 aa		6.47	□□□□□ -1.37
ACSS2-222	ENST00000493805	AHNAK2	Q8IVF2	5795 aa		6.42	□□□□□ -1.38
ACSS2-222	ENST00000493805	KRTAP4-6	Q9BYQ5	205 aa		6.39	□□□□□ -1.39
ACSS2-222	ENST00000493805	PMAIP1	Q13794	54 aa		6.35	□□□□□ -1.39
ACSS2-222	ENST00000493805	KRTAP5-10	Q6L8G5	202 aa		6.35	□□□□□ -1.39
ACSS2-222	ENST00000493805	KRTAP9-6	A8MVA2	160 aa		6.24	□□□□□ -1.41
ACSS2-222	ENST00000493805	SPRR5	A0A1B0GTR4	108 aa		6.18	□□□□□ -1.42
ACSS2-222	ENST00000493805	KRTAP12-4	P60329	112 aa		6.17	□□□□□ -1.42
ACSS2-222	ENST00000493805	KRTAP20-2	Q3LI61	65 aa		6.17	□□□□□ -1.42
ACSS2-222	ENST00000493805	SYNE1	Q8NF91	8797 aa	Known RBP	6.17	□□□□□ -1.42
ACSS2-222	ENST00000493805	KRTAP5-7	Q6L8G8	165 aa		6.15	□□□□□ -1.42
ACSS2-222	ENST00000493805	KRTAP5-3	Q6L8H2	238 aa		6.15	□□□□□ -1.42
ACSS2-222	ENST00000493805	PRO0628	Q9UI54	55 aa		6.15	□□□□□ -1.42
ACSS2-222	ENST00000493805	MT1A	P04731	61 aa		6.09	□□□□□ -1.43
ACSS2-222	ENST00000493805	KRTAP6-1	Q3LI64	71 aa		6.05	□□□□□ -1.44
ACSS2-222	ENST00000493805	PRAC1	Q96KF2	57 aa		6.02	□□□□□ -1.45
ACSS2-222	ENST00000493805	KRTAP9-4	Q9BYQ2	154 aa		5.88	□□□□□ -1.47
ACSS2-222	ENST00000493805	KRTAP5-2	Q701N4	177 aa		5.84	□□□□□ -1.47
ACSS2-222	ENST00000493805	KTN1-AS1	Q86SY8	53 aa		5.81	□□□□□ -1.48
ACSS2-222	ENST00000493805	KRTAP6-2	Q3LI66	62 aa		5.72	□□□□□ -1.49
ACSS2-222	ENST00000493805	KRTAP4-11	Q9BYQ6	195 aa		5.67	□□□□□ -1.5
ACSS2-222	ENST00000493805	SVIP	Q8NHG7	77 aa		5.56	□□□□□ -1.52
ACSS2-222	ENST00000493805	MT3	P25713	68 aa		5.54	□□□□□ -1.52
ACSS2-222	ENST00000493805	KRTAP5-8	O75690	187 aa		5.5	□□□□□ -1.53
ACSS2-222	ENST00000493805	OBSCN	Q5VST9	7968 aa		5.39	□□□□□ -1.55
ACSS2-222	ENST00000493805	MUC5AC	P98088	5654 aa		5.34	□□□□□ -1.56
ACSS2-222	ENST00000493805	MUC5B	Q9HC84	5762 aa	Predicted RBP	5.33	□□□□□ -1.56
ACSS2-222	ENST00000493805	AHNAK	Q09666	5890 aa	Known RBP	5.31	□□□□□ -1.56
ACSS2-222	ENST00000493805	KRTAP9-9	Q9BYP9	154 aa		5.22	□□□□□ -1.57
ACSS2-222	ENST00000493805	KRTAP5-1	Q6L8H4	278 aa		5.18	□□□□□ -1.58
ACSS2-222	ENST00000493805	LUZP6	Q538Z0	58 aa		5.07	□□□□□ -1.6
ACSS2-222	ENST00000493805	LCE1E	Q5T753	118 aa		5.05	□□□□□ -1.6
ACSS2-222	ENST00000493805	KRTAP4-12	Q9BQ66	201 aa		4.79	□□□□□ -1.64
ACSS2-222	ENST00000493805	LCE3D	Q9BYE3	92 aa		4.77	□□□□□ -1.65
ACSS2-222	ENST00000493805	KRTAP4-2	Q9BYR5	136 aa		4.76	□□□□□ -1.65
ACSS2-222	ENST00000493805	LCE1C	Q5T751	118 aa		4.69	□□□□□ -1.66
ACSS2-222	ENST00000493805	LCE1B	Q5T7P3	118 aa		4.69	□□□□□ -1.66
ACSS2-222	ENST00000493805	LCE3E	Q5T5B0	92 aa		4.54	□□□□□ -1.68
ACSS2-222	ENST00000493805	NDUFAF8	A1L188	74 aa		4.35	□□□□□ -1.71
ACSS2-222	ENST00000493805	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.32	□□□□□ -1.72
ACSS2-222	ENST00000493805	KRTAP5-11	Q6L8G4	156 aa		4.21	□□□□□ -1.74
ACSS2-222	ENST00000493805	LCE1F	Q5T754	118 aa		4.11	□□□□□ -1.75
ACSS2-222	ENST00000493805	KRTAP21-2	Q3LI59	83 aa		4.01	□□□□□ -1.77
ACSS2-222	ENST00000493805		H3BS24	57 aa		3.99	□□□□□ -1.77
ACSS2-222	ENST00000493805		A0A0A0MQY5	61 aa		3.8	□□□□□ -1.8
ACSS2-222	ENST00000493805	PHGR1	C9JFL3	82 aa		3.65	□□□□□ -1.83
ACSS2-222	ENST00000493805	KRTAP4-4	Q9BYR3	166 aa		3.6	□□□□□ -1.83
ACSS2-222	ENST00000493805	PRM1	P04553	51 aa		3.57	□□□□□ -1.84
ACSS2-222	ENST00000493805	INE1	O15225	51 aa		3.56	□□□□□ -1.84
ACSS2-222	ENST00000493805	MUC19	Q7Z5P9	8384 aa		3.33	□□□□□ -1.88
ACSS2-222	ENST00000493805	KRTAP21-1	Q3LI58	79 aa		2.83	□□□□□ -1.96
ACSS2-222	ENST00000493805	MUC16	Q8WXI7	14507 aa		2.37	□□□□□ -2.03

Retrieved 78 of 20,778 RNA–protein pairs in 11.6 ms