RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 KRTAP9-6A8MVA2 160 aa3.67□□□□□ -1.82
PHACTR4-204ENST00000493669 KRTAP19-3Q7Z4W3 81 aa3.67□□□□□ -1.82
PHACTR4-204ENST00000493669 MT1GP13640 62 aa3.66□□□□□ -1.82
PHACTR4-204ENST00000493669 MT1MQ8N339 61 aa3.61□□□□□ -1.83
PHACTR4-204ENST00000493669 CRCT1Q9UGL9 99 aa3.61□□□□□ -1.83
PHACTR4-204ENST00000493669 SPRR2FQ96RM1 72 aa3.6□□□□□ -1.83
PHACTR4-204ENST00000493669 LCE5AQ5TCM9 118 aa3.57□□□□□ -1.84
PHACTR4-204ENST00000493669 KRTAP2-3P0C7H8 128 aa3.53□□□□□ -1.84
PHACTR4-204ENST00000493669 KRTAP2-4Q9BYR9 128 aa3.53□□□□□ -1.84
PHACTR4-204ENST00000493669 KRTAP2-1Q9BYU5 128 aa3.53□□□□□ -1.84
PHACTR4-204ENST00000493669 MACF1Q9UPN3 7388 aaKnown RBP3.52□□□□□ -1.85
PHACTR4-204ENST00000493669 MUC12Q9UKN1 5478 aa3.52□□□□□ -1.85
PHACTR4-204ENST00000493669 KRTAP5-9P26371 169 aa3.52□□□□□ -1.85
PHACTR4-204ENST00000493669 KRTAP4-3Q9BYR4 195 aa3.52□□□□□ -1.85
PHACTR4-204ENST00000493669 INE1O15225 51 aa3.5□□□□□ -1.85
PHACTR4-204ENST00000493669 LOC100996750A0A140TA64 210 aa3.45□□□□□ -1.86
PHACTR4-204ENST00000493669 LCE1AQ5T7P2 110 aa3.42□□□□□ -1.86
PHACTR4-204ENST00000493669 SYNE2Q8WXH0 6885 aaKnown RBP3.37□□□□□ -1.87
PHACTR4-204ENST00000493669 SPRR2EP22531 72 aa3.36□□□□□ -1.87
PHACTR4-204ENST00000493669 SPRR2BP35325 72 aa3.36□□□□□ -1.87
PHACTR4-204ENST00000493669 SPRR2AP35326 72 aa3.36□□□□□ -1.87
PHACTR4-204ENST00000493669 KRTAP6-3Q3LI67 103 aa3.35□□□□□ -1.87
PHACTR4-204ENST00000493669 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.33□□□□□ -1.88
PHACTR4-204ENST00000493669 KRTAP9-7A8MTY7 169 aa3.31□□□□□ -1.88
PHACTR4-204ENST00000493669 MDN1Q9NU22 5596 aa3.3□□□□□ -1.88
PHACTR4-204ENST00000493669 MT1AP04731 61 aa3.25□□□□□ -1.89
PHACTR4-204ENST00000493669 KRTAP5-5Q701N2 237 aaPredicted RBP3.25□□□□□ -1.89
PHACTR4-204ENST00000493669 SPRR2DP22532 72 aa3.24□□□□□ -1.89
PHACTR4-204ENST00000493669 DSTQ03001 7570 aaKnown RBP3.23□□□□□ -1.89
PHACTR4-204ENST00000493669 KRTAP6-1Q3LI64 71 aa3.2□□□□□ -1.9
PHACTR4-204ENST00000493669 LCE3BQ5TA77 95 aa3.15□□□□□ -1.91
PHACTR4-204ENST00000493669 KRTAP9-4Q9BYQ2 154 aa3.06□□□□□ -1.92
PHACTR4-204ENST00000493669 NEBP20929 6669 aa3.04□□□□□ -1.92
PHACTR4-204ENST00000493669 KRTAP12-4P60329 112 aa3.02□□□□□ -1.93
PHACTR4-204ENST00000493669 KRTAP5-4Q6L8H1 288 aa3□□□□□ -1.93
PHACTR4-204ENST00000493669 SYNE1Q8NF91 8797 aaKnown RBP3□□□□□ -1.93
PHACTR4-204ENST00000493669 KRTAP4-9Q9BYQ8 210 aa2.99□□□□□ -1.93
PHACTR4-204ENST00000493669 LCE3DQ9BYE3 92 aa2.96□□□□□ -1.93
PHACTR4-204ENST00000493669 MT3P25713 68 aa2.93□□□□□ -1.94
PHACTR4-204ENST00000493669 LCE3EQ5T5B0 92 aa2.91□□□□□ -1.94
PHACTR4-204ENST00000493669 KRTAP6-2Q3LI66 62 aa2.9□□□□□ -1.94
PHACTR4-204ENST00000493669 KRTAP20-1Q3LI63 56 aa2.9□□□□□ -1.95
PHACTR4-204ENST00000493669 LCE4AQ5TA78 99 aa2.9□□□□□ -1.95
PHACTR4-204ENST00000493669 KRTAP2-2Q9BYT5 123 aa2.83□□□□□ -1.96
PHACTR4-204ENST00000493669 KRTAP4-6Q9BYQ5 205 aa2.79□□□□□ -1.96
PHACTR4-204ENST00000493669 KRTAP20-2Q3LI61 65 aa2.78□□□□□ -1.96
PHACTR4-204ENST00000493669 MT4P47944 62 aa2.78□□□□□ -1.96
PHACTR4-204ENST00000493669 KRTAP5-2Q701N4 177 aa2.76□□□□□ -1.97
PHACTR4-204ENST00000493669 LCE1DQ5T752 114 aa2.7□□□□□ -1.98
PHACTR4-204ENST00000493669 KRTAP5-3Q6L8H2 238 aa2.67□□□□□ -1.98
PHACTR4-204ENST00000493669 HMCN1Q96RW7 5635 aa2.66□□□□□ -1.98
PHACTR4-204ENST00000493669 PRM1P04553 51 aa2.63□□□□□ -1.99
PHACTR4-204ENST00000493669 OBSCNQ5VST9 7968 aa2.61□□□□□ -1.99
PHACTR4-204ENST00000493669 GPR98Q8WXG9 6306 aa2.53□□□□□ -2
PHACTR4-204ENST00000493669 LCE1EQ5T753 118 aa2.51□□□□□ -2.01
PHACTR4-204ENST00000493669 KRTAP5-10Q6L8G5 202 aa2.36□□□□□ -2.03
PHACTR4-204ENST00000493669 KRTAP4-11Q9BYQ6 195 aa2.35□□□□□ -2.03
PHACTR4-204ENST00000493669 MUC5ACP98088 5654 aa2.34□□□□□ -2.03
PHACTR4-204ENST00000493669 KRTAP5-1Q6L8H4 278 aa2.34□□□□□ -2.03
PHACTR4-204ENST00000493669 LCE1CQ5T751 118 aa2.33□□□□□ -2.04
PHACTR4-204ENST00000493669 LCE1BQ5T7P3 118 aa2.33□□□□□ -2.04
PHACTR4-204ENST00000493669 KRTAP4-2Q9BYR5 136 aa2.31□□□□□ -2.04
PHACTR4-204ENST00000493669 KRTAP5-7Q6L8G8 165 aa2.28□□□□□ -2.04
PHACTR4-204ENST00000493669 AHNAK2Q8IVF2 5795 aa2.28□□□□□ -2.04
PHACTR4-204ENST00000493669 KRTAP5-8O75690 187 aa2.26□□□□□ -2.05
PHACTR4-204ENST00000493669 KRTAP9-9Q9BYP9 154 aa2.23□□□□□ -2.05
PHACTR4-204ENST00000493669 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.22□□□□□ -2.05
PHACTR4-204ENST00000493669 KRTAP4-12Q9BQ66 201 aa2.16□□□□□ -2.06
PHACTR4-204ENST00000493669 KRTAP21-2Q3LI59 83 aa2.09□□□□□ -2.07
PHACTR4-204ENST00000493669 AHNAKQ09666 5890 aaKnown RBP2.04□□□□□ -2.08
PHACTR4-204ENST00000493669 KRTAP5-11Q6L8G4 156 aa2.04□□□□□ -2.08
PHACTR4-204ENST00000493669 MUC5BQ9HC84 5762 aaPredicted RBP1.98□□□□□ -2.09
PHACTR4-204ENST00000493669 LCE1FQ5T754 118 aa1.94□□□□□ -2.1
PHACTR4-204ENST00000493669 KRTAP4-4Q9BYR3 166 aa1.81□□□□□ -2.12
PHACTR4-204ENST00000493669 PHGR1C9JFL3 82 aa1.74□□□□□ -2.13
PHACTR4-204ENST00000493669 KRTAP21-1Q3LI58 79 aa1.67□□□□□ -2.14
PHACTR4-204ENST00000493669 MUC19Q7Z5P9 8384 aa1.5□□□□□ -2.17
PHACTR4-204ENST00000493669 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 130.2 ms