RNA–Protein interactions for RNA: ENST00000493467.5

TSC1-207, Transcript of TSC complex subunit 1, humanhuman

TSL 1 (best)

Gene TSC1, Length 2,219 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-207ENST00000493467 MT1XP80297 61 aa3.86□□□□□ -1.79
TSC1-207ENST00000493467 KRTAP4-8A0A0G2JLE6 195 aa3.82□□□□□ -1.8
TSC1-207ENST00000493467 CRCT1Q9UGL9 99 aa3.82□□□□□ -1.8
TSC1-207ENST00000493467 KRTAP4-11Q9BYQ6 195 aa3.78□□□□□ -1.8
TSC1-207ENST00000493467 KRTAP12-3P60328 96 aa3.76□□□□□ -1.81
TSC1-207ENST00000493467 KRTAP10-7P60409 375 aaPredicted RBP3.73□□□□□ -1.81
TSC1-207ENST00000493467 LCE3EQ5T5B0 92 aa3.73□□□□□ -1.81
TSC1-207ENST00000493467 KRTAP4-9Q9BYQ8 210 aa3.73□□□□□ -1.81
TSC1-207ENST00000493467 FSIP2Q5CZC0 6907 aa3.61□□□□□ -1.83
TSC1-207ENST00000493467 KRTAP4-7Q9BYR0 210 aa3.61□□□□□ -1.83
TSC1-207ENST00000493467 INE1O15225 51 aa3.59□□□□□ -1.83
TSC1-207ENST00000493467 KRTAP19-5Q3LI72 72 aa3.58□□□□□ -1.84
TSC1-207ENST00000493467 LCE1EQ5T753 118 aa3.5□□□□□ -1.85
TSC1-207ENST00000493467 KRTAP4-2Q9BYR5 136 aa3.48□□□□□ -1.85
TSC1-207ENST00000493467 KRTAP19-7Q3SYF9 63 aa3.44□□□□□ -1.86
TSC1-207ENST00000493467 USH2AO75445 5202 aa3.41□□□□□ -1.86
TSC1-207ENST00000493467 KRTAP9-6A8MVA2 160 aa3.4□□□□□ -1.86
TSC1-207ENST00000493467 SSPOA2VEC9 5147 aa3.4□□□□□ -1.87
TSC1-207ENST00000493467 FCGBPQ9Y6R7 5405 aaPredicted RBP3.37□□□□□ -1.87
TSC1-207ENST00000493467 MT1EP04732 61 aa3.35□□□□□ -1.87
TSC1-207ENST00000493467 KRTAP2-3P0C7H8 128 aa3.35□□□□□ -1.87
TSC1-207ENST00000493467 MT1LQ93083 61 aa3.35□□□□□ -1.87
TSC1-207ENST00000493467 LCE3DQ9BYE3 92 aa3.35□□□□□ -1.87
TSC1-207ENST00000493467 KRTAP2-4Q9BYR9 128 aa3.35□□□□□ -1.87
TSC1-207ENST00000493467 KRTAP2-1Q9BYU5 128 aa3.35□□□□□ -1.87
TSC1-207ENST00000493467 KMT2DO14686 5537 aa3.34□□□□□ -1.87
TSC1-207ENST00000493467 KRTAP19-6Q3LI70 58 aa3.29□□□□□ -1.88
TSC1-207ENST00000493467 KRTAP6-3Q3LI67 103 aa3.28□□□□□ -1.88
TSC1-207ENST00000493467 MACF1Q9UPN3 7388 aaKnown RBP3.26□□□□□ -1.89
TSC1-207ENST00000493467 SYNE2Q8WXH0 6885 aaKnown RBP3.22□□□□□ -1.89
TSC1-207ENST00000493467 NEBP20929 6669 aa3.15□□□□□ -1.9
TSC1-207ENST00000493467 KRTAP20-1Q3LI63 56 aa3.14□□□□□ -1.91
TSC1-207ENST00000493467 MT1MQ8N339 61 aa3.13□□□□□ -1.91
TSC1-207ENST00000493467 MT1GP13640 62 aa3.12□□□□□ -1.91
TSC1-207ENST00000493467 KRTAP19-3Q7Z4W3 81 aa3.12□□□□□ -1.91
TSC1-207ENST00000493467 KRTAP4-3Q9BYR4 195 aa3.09□□□□□ -1.91
TSC1-207ENST00000493467 MUC12Q9UKN1 5478 aa3.04□□□□□ -1.92
TSC1-207ENST00000493467 KRTAP5-9P26371 169 aa3□□□□□ -1.93
TSC1-207ENST00000493467 KRTAP5-3Q6L8H2 238 aa2.99□□□□□ -1.93
TSC1-207ENST00000493467 SPRR2FQ96RM1 72 aa2.95□□□□□ -1.94
TSC1-207ENST00000493467 KRTAP12-4P60329 112 aa2.92□□□□□ -1.94
TSC1-207ENST00000493467 MDN1Q9NU22 5596 aa2.91□□□□□ -1.94
TSC1-207ENST00000493467 MT1AP04731 61 aa2.86□□□□□ -1.95
TSC1-207ENST00000493467 SPRR2EP22531 72 aa2.84□□□□□ -1.96
TSC1-207ENST00000493467 SPRR2BP35325 72 aa2.84□□□□□ -1.96
TSC1-207ENST00000493467 SPRR2AP35326 72 aa2.84□□□□□ -1.96
TSC1-207ENST00000493467 KRTAP6-1Q3LI64 71 aa2.82□□□□□ -1.96
TSC1-207ENST00000493467 KRTAP5-5Q701N2 237 aaPredicted RBP2.78□□□□□ -1.96
TSC1-207ENST00000493467 SPRR2DP22532 72 aa2.75□□□□□ -1.97
TSC1-207ENST00000493467 GPR98Q8WXG9 6306 aa2.75□□□□□ -1.97
TSC1-207ENST00000493467 SYNE1Q8NF91 8797 aaKnown RBP2.71□□□□□ -1.98
TSC1-207ENST00000493467 DSTQ03001 7570 aaKnown RBP2.7□□□□□ -1.98
TSC1-207ENST00000493467 KRTAP5-11Q6L8G4 156 aa2.6□□□□□ -1.99
TSC1-207ENST00000493467 PRM1P04553 51 aa2.58□□□□□ -2
TSC1-207ENST00000493467 KRTAP6-2Q3LI66 62 aa2.51□□□□□ -2.01
TSC1-207ENST00000493467 KRTAP5-10Q6L8G5 202 aa2.48□□□□□ -2.01
TSC1-207ENST00000493467 AHNAK2Q8IVF2 5795 aa2.48□□□□□ -2.01
TSC1-207ENST00000493467 HMCN1Q96RW7 5635 aa2.46□□□□□ -2.02
TSC1-207ENST00000493467 KRTAP5-4Q6L8H1 288 aa2.45□□□□□ -2.02
TSC1-207ENST00000493467 KRTAP5-7Q6L8G8 165 aa2.44□□□□□ -2.02
TSC1-207ENST00000493467 MT4P47944 62 aa2.4□□□□□ -2.03
TSC1-207ENST00000493467 KRTAP5-2Q701N4 177 aa2.31□□□□□ -2.04
TSC1-207ENST00000493467 KRTAP20-2Q3LI61 65 aa2.26□□□□□ -2.05
TSC1-207ENST00000493467 KRTAP5-1Q6L8H4 278 aa2.26□□□□□ -2.05
TSC1-207ENST00000493467 OBSCNQ5VST9 7968 aa2.26□□□□□ -2.05
TSC1-207ENST00000493467 LCE1CQ5T751 118 aa2.17□□□□□ -2.06
TSC1-207ENST00000493467 LCE1BQ5T7P3 118 aa2.17□□□□□ -2.06
TSC1-207ENST00000493467 AHNAKQ09666 5890 aaKnown RBP2.13□□□□□ -2.07
TSC1-207ENST00000493467 MUC5ACP98088 5654 aa2.1□□□□□ -2.07
TSC1-207ENST00000493467 MUC5BQ9HC84 5762 aaPredicted RBP2.05□□□□□ -2.08
TSC1-207ENST00000493467 KRTAP5-8O75690 187 aa2.03□□□□□ -2.08
TSC1-207ENST00000493467 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.99□□□□□ -2.09
TSC1-207ENST00000493467 MUC19Q7Z5P9 8384 aa1.95□□□□□ -2.1
TSC1-207ENST00000493467 KRTAP21-2Q3LI59 83 aa1.84□□□□□ -2.11
TSC1-207ENST00000493467 KRTAP4-4Q9BYR3 166 aa1.72□□□□□ -2.13
TSC1-207ENST00000493467 KRTAP21-1Q3LI58 79 aa1.67□□□□□ -2.14
TSC1-207ENST00000493467 PHGR1C9JFL3 82 aa1.45□□□□□ -2.18
TSC1-207ENST00000493467 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 47.4 ms