RNA–Protein interactions for RNA: ENST00000493389.1

PMM1-209, Transcript of phosphomannomutase 1, humanhuman

TSL 3

Gene PMM1, Length 866 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMM1-209ENST00000493389 LCE3AQ5TA76 89 aa6.5□□□□□ -1.37
PMM1-209ENST00000493389 A6NED7 52 aa6.49□□□□□ -1.37
PMM1-209ENST00000493389 BRK1Q8WUW1 75 aa6.44□□□□□ -1.38
PMM1-209ENST00000493389 DSTQ03001 7570 aaKnown RBP6.42□□□□□ -1.38
PMM1-209ENST00000493389 MT1GP13640 62 aa6.38□□□□□ -1.39
PMM1-209ENST00000493389 MT1LQ93083 61 aa6.37□□□□□ -1.39
PMM1-209ENST00000493389 CDC42SE1Q9NRR8 79 aa6.37□□□□□ -1.39
PMM1-209ENST00000493389 KRTAP25-1Q3LHN0 102 aa6.36□□□□□ -1.39
PMM1-209ENST00000493389 PRO0628Q9UI54 55 aa6.36□□□□□ -1.39
PMM1-209ENST00000493389 PP632Q6XCG6 107 aa6.34□□□□□ -1.39
PMM1-209ENST00000493389 MT1MQ8N339 61 aa6.32□□□□□ -1.4
PMM1-209ENST00000493389 KRTAP12-3P60328 96 aa6.25□□□□□ -1.41
PMM1-209ENST00000493389 KRTAP4-3Q9BYR4 195 aa6.21□□□□□ -1.42
PMM1-209ENST00000493389 KRTAP4-9Q9BYQ8 210 aa6.14□□□□□ -1.43
PMM1-209ENST00000493389 PMAIP1Q13794 54 aa6.13□□□□□ -1.43
PMM1-209ENST00000493389 KRTAP23-1A1A580 65 aa6.12□□□□□ -1.43
PMM1-209ENST00000493389 KRTAP4-7Q9BYR0 210 aa6.12□□□□□ -1.43
PMM1-209ENST00000493389 ROMO1P60602 79 aa6.1□□□□□ -1.43
PMM1-209ENST00000493389 HMCN1Q96RW7 5635 aa6.01□□□□□ -1.45
PMM1-209ENST00000493389 GPR98Q8WXG9 6306 aa6.01□□□□□ -1.45
PMM1-209ENST00000493389 LCE1DQ5T752 114 aa5.99□□□□□ -1.45
PMM1-209ENST00000493389 LCE4AQ5TA78 99 aa5.98□□□□□ -1.45
PMM1-209ENST00000493389 MT4P47944 62 aa5.95□□□□□ -1.46
PMM1-209ENST00000493389 KRTAP19-4Q3LI73 84 aa5.94□□□□□ -1.46
PMM1-209ENST00000493389 KRTAP5-4Q6L8H1 288 aa5.93□□□□□ -1.46
PMM1-209ENST00000493389 SVIPQ8NHG7 77 aa5.93□□□□□ -1.46
PMM1-209ENST00000493389 KRTAP15-1Q3LI76 137 aa5.9□□□□□ -1.46
PMM1-209ENST00000493389 KTN1-AS1Q86SY8 53 aa5.87□□□□□ -1.47
PMM1-209ENST00000493389 KRTAP4-6Q9BYQ5 205 aa5.81□□□□□ -1.48
PMM1-209ENST00000493389 AHNAK2Q8IVF2 5795 aa5.78□□□□□ -1.48
PMM1-209ENST00000493389 LOC100996750A0A140TA64 210 aa5.78□□□□□ -1.48
PMM1-209ENST00000493389 KRTAP5-5Q701N2 237 aaPredicted RBP5.78□□□□□ -1.48
PMM1-209ENST00000493389 LCE3CQ5T5A8 94 aa5.77□□□□□ -1.49
PMM1-209ENST00000493389 SYNE1Q8NF91 8797 aaKnown RBP5.67□□□□□ -1.5
PMM1-209ENST00000493389 KRTAP20-2Q3LI61 65 aa5.59□□□□□ -1.51
PMM1-209ENST00000493389 PRAC1Q96KF2 57 aa5.58□□□□□ -1.52
PMM1-209ENST00000493389 SPRR5A0A1B0GTR4 108 aa5.55□□□□□ -1.52
PMM1-209ENST00000493389 KRTAP12-4P60329 112 aa5.55□□□□□ -1.52
PMM1-209ENST00000493389 KRTAP5-10Q6L8G5 202 aa5.49□□□□□ -1.53
PMM1-209ENST00000493389 KRTAP9-6A8MVA2 160 aa5.48□□□□□ -1.53
PMM1-209ENST00000493389 KRTAP5-3Q6L8H2 238 aa5.43□□□□□ -1.54
PMM1-209ENST00000493389 MT1AP04731 61 aa5.41□□□□□ -1.54
PMM1-209ENST00000493389 KRTAP6-1Q3LI64 71 aa5.4□□□□□ -1.54
PMM1-209ENST00000493389 KRTAP5-7Q6L8G8 165 aa5.24□□□□□ -1.57
PMM1-209ENST00000493389 KRTAP5-2Q701N4 177 aa5.23□□□□□ -1.57
PMM1-209ENST00000493389 KRTAP9-4Q9BYQ2 154 aa5.21□□□□□ -1.58
PMM1-209ENST00000493389 KRTAP6-2Q3LI66 62 aa5.13□□□□□ -1.59
PMM1-209ENST00000493389 KRTAP4-11Q9BYQ6 195 aa5.07□□□□□ -1.6
PMM1-209ENST00000493389 MT3P25713 68 aa4.93□□□□□ -1.62
PMM1-209ENST00000493389 KRTAP5-8O75690 187 aa4.9□□□□□ -1.63
PMM1-209ENST00000493389 OBSCNQ5VST9 7968 aa4.89□□□□□ -1.63
PMM1-209ENST00000493389 LUZP6Q538Z0 58 aa4.79□□□□□ -1.64
PMM1-209ENST00000493389 AHNAKQ09666 5890 aaKnown RBP4.77□□□□□ -1.65
PMM1-209ENST00000493389 MUC5BQ9HC84 5762 aaPredicted RBP4.75□□□□□ -1.65
PMM1-209ENST00000493389 MUC5ACP98088 5654 aa4.73□□□□□ -1.65
PMM1-209ENST00000493389 KRTAP5-1Q6L8H4 278 aa4.66□□□□□ -1.66
PMM1-209ENST00000493389 KRTAP9-9Q9BYP9 154 aa4.59□□□□□ -1.67
PMM1-209ENST00000493389 NDUFAF8A1L188 74 aa4.55□□□□□ -1.68
PMM1-209ENST00000493389 LCE1EQ5T753 118 aa4.48□□□□□ -1.69
PMM1-209ENST00000493389 KRTAP4-2Q9BYR5 136 aa4.27□□□□□ -1.73
PMM1-209ENST00000493389 LCE1BQ5T7P3 118 aa4.25□□□□□ -1.73
PMM1-209ENST00000493389 LCE3DQ9BYE3 92 aa4.22□□□□□ -1.73
PMM1-209ENST00000493389 A0A0A0MQY5 61 aa4.18□□□□□ -1.74
PMM1-209ENST00000493389 LCE1CQ5T751 118 aa4.16□□□□□ -1.74
PMM1-209ENST00000493389 H3BS24 57 aa4.09□□□□□ -1.75
PMM1-209ENST00000493389 LCE3EQ5T5B0 92 aa4□□□□□ -1.77
PMM1-209ENST00000493389 INE1O15225 51 aa3.89□□□□□ -1.79
PMM1-209ENST00000493389 KRTAP4-12Q9BQ66 201 aa3.84□□□□□ -1.79
PMM1-209ENST00000493389 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.8□□□□□ -1.8
PMM1-209ENST00000493389 KRTAP5-11Q6L8G4 156 aa3.76□□□□□ -1.81
PMM1-209ENST00000493389 LCE1FQ5T754 118 aa3.6□□□□□ -1.83
PMM1-209ENST00000493389 KRTAP21-2Q3LI59 83 aa3.55□□□□□ -1.84
PMM1-209ENST00000493389 KRTAP4-4Q9BYR3 166 aa3.27□□□□□ -1.89
PMM1-209ENST00000493389 PHGR1C9JFL3 82 aa3.25□□□□□ -1.89
PMM1-209ENST00000493389 PRM1P04553 51 aa3.11□□□□□ -1.91
PMM1-209ENST00000493389 MUC19Q7Z5P9 8384 aa3.05□□□□□ -1.92
PMM1-209ENST00000493389 KRTAP21-1Q3LI58 79 aa2.39□□□□□ -2.03
PMM1-209ENST00000493389 MUC16Q8WXI7 14507 aa2.19□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 13.5 ms