RNA–Protein interactions for RNA: ENST00000493222.5

UGP2-223, Transcript of UDP-glucose pyrophosphorylase 2, human

TSL 3

Gene UGP2, Length 864 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UGP2-223	ENST00000493222	C10orf95	Q9H7T3	257 aa		7.31	□□□□□ -1.24
UGP2-223	ENST00000493222	TNP1	P09430	55 aa		7.29	□□□□□ -1.24
UGP2-223	ENST00000493222	MT4	P47944	62 aa		7.28	□□□□□ -1.24
UGP2-223	ENST00000493222	KRTAP4-3	Q9BYR4	195 aa		7.23	□□□□□ -1.25
UGP2-223	ENST00000493222	HMCN1	Q96RW7	5635 aa		7.23	□□□□□ -1.25
UGP2-223	ENST00000493222	ANAPC13	Q9BS18	74 aa		7.2	□□□□□ -1.26
UGP2-223	ENST00000493222	PRR15L	Q9BU68	103 aa		7.15	□□□□□ -1.26
UGP2-223	ENST00000493222	KRTAP5-4	Q6L8H1	288 aa		7.14	□□□□□ -1.27
UGP2-223	ENST00000493222	CCDC179	H3BU77	68 aa		7.07	□□□□□ -1.28
UGP2-223	ENST00000493222	ATP5E	P56381	51 aa	Predicted RBP	7.06	□□□□□ -1.28
UGP2-223	ENST00000493222	KRTAP4-6	Q9BYQ5	205 aa		7.04	□□□□□ -1.28
UGP2-223	ENST00000493222	KRTAP12-3	P60328	96 aa		7.03	□□□□□ -1.28
UGP2-223	ENST00000493222	KRTAP4-7	Q9BYR0	210 aa		7.01	□□□□□ -1.29
UGP2-223	ENST00000493222	LINC01558	Q9Y6Z2	57 aa		7.01	□□□□□ -1.29
UGP2-223	ENST00000493222	AHNAK2	Q8IVF2	5795 aa		7	□□□□□ -1.29
UGP2-223	ENST00000493222	KRTAP5-10	Q6L8G5	202 aa		6.93	□□□□□ -1.3
UGP2-223	ENST00000493222	UQCR11	O14957	56 aa		6.9	□□□□□ -1.3
UGP2-223	ENST00000493222	LOC100996750	A0A140TA64	210 aa		6.8	□□□□□ -1.32
UGP2-223	ENST00000493222	TMEM258	P61165	79 aa		6.8	□□□□□ -1.32
UGP2-223	ENST00000493222	KRTAP15-1	Q3LI76	137 aa		6.8	□□□□□ -1.32
UGP2-223	ENST00000493222	KRTAP5-5	Q701N2	237 aa	Predicted RBP	6.8	□□□□□ -1.32
UGP2-223	ENST00000493222	KRTAP25-1	Q3LHN0	102 aa		6.78	□□□□□ -1.32
UGP2-223	ENST00000493222	KRTAP20-2	Q3LI61	65 aa		6.77	□□□□□ -1.33
UGP2-223	ENST00000493222	KRTAP5-3	Q6L8H2	238 aa		6.74	□□□□□ -1.33
UGP2-223	ENST00000493222	MIR22HG	Q0VDD5	57 aa		6.73	□□□□□ -1.33
UGP2-223	ENST00000493222	SPRR5	A0A1B0GTR4	108 aa		6.7	□□□□□ -1.34
UGP2-223	ENST00000493222	KRTAP5-7	Q6L8G8	165 aa		6.68	□□□□□ -1.34
UGP2-223	ENST00000493222	KRTAP4-12	Q9BQ66	201 aa		6.68	□□□□□ -1.34
UGP2-223	ENST00000493222	KRTAP12-4	P60329	112 aa		6.66	□□□□□ -1.34
UGP2-223	ENST00000493222		K7ERS5	55 aa		6.65	□□□□□ -1.34
UGP2-223	ENST00000493222	KRTAP9-4	Q9BYQ2	154 aa		6.58	□□□□□ -1.36
UGP2-223	ENST00000493222	PSPHP1	O15172	72 aa		6.5	□□□□□ -1.37
UGP2-223	ENST00000493222	RPS28	P62857	69 aa	Known RBP	6.49	□□□□□ -1.37
UGP2-223	ENST00000493222	KRTAP9-9	Q9BYP9	154 aa		6.49	□□□□□ -1.37
UGP2-223	ENST00000493222	SYNE1	Q8NF91	8797 aa	Known RBP	6.46	□□□□□ -1.37
UGP2-223	ENST00000493222		V9GYY9	64 aa		6.46	□□□□□ -1.38
UGP2-223	ENST00000493222	LCE3C	Q5T5A8	94 aa		6.45	□□□□□ -1.38
UGP2-223	ENST00000493222		Q1T7F1	81 aa		6.4	□□□□□ -1.38
UGP2-223	ENST00000493222	PRAC1	Q96KF2	57 aa		6.38	□□□□□ -1.39
UGP2-223	ENST00000493222	MT1A	P04731	61 aa		6.28	□□□□□ -1.4
UGP2-223	ENST00000493222		A6NED7	52 aa		6.27	□□□□□ -1.41
UGP2-223	ENST00000493222	CDC42SE1	Q9NRR8	79 aa		6.27	□□□□□ -1.41
UGP2-223	ENST00000493222	KRTAP6-1	Q3LI64	71 aa		6.25	□□□□□ -1.41
UGP2-223	ENST00000493222	KRTAP5-2	Q701N4	177 aa		6.23	□□□□□ -1.41
UGP2-223	ENST00000493222	KRTAP4-11	Q9BYQ6	195 aa		6.21	□□□□□ -1.42
UGP2-223	ENST00000493222	ROMO1	P60602	79 aa		6.15	□□□□□ -1.42
UGP2-223	ENST00000493222	KRTAP9-6	A8MVA2	160 aa		6.09	□□□□□ -1.43
UGP2-223	ENST00000493222	KRTAP5-8	O75690	187 aa		6.01	□□□□□ -1.45
UGP2-223	ENST00000493222	KRTAP6-2	Q3LI66	62 aa		6.01	□□□□□ -1.45
UGP2-223	ENST00000493222	OBSCN	Q5VST9	7968 aa		5.84	□□□□□ -1.48
UGP2-223	ENST00000493222	MUC5AC	P98088	5654 aa		5.8	□□□□□ -1.48
UGP2-223	ENST00000493222	NDUFAF8	A1L188	74 aa		5.78	□□□□□ -1.48
UGP2-223	ENST00000493222	MUC5B	Q9HC84	5762 aa	Predicted RBP	5.77	□□□□□ -1.49
UGP2-223	ENST00000493222	BRK1	Q8WUW1	75 aa		5.75	□□□□□ -1.49
UGP2-223	ENST00000493222	MT3	P25713	68 aa		5.74	□□□□□ -1.49
UGP2-223	ENST00000493222	AHNAK	Q09666	5890 aa	Known RBP	5.73	□□□□□ -1.49
UGP2-223	ENST00000493222	PRO0628	Q9UI54	55 aa		5.67	□□□□□ -1.5
UGP2-223	ENST00000493222	KRTAP5-1	Q6L8H4	278 aa		5.62	□□□□□ -1.51
UGP2-223	ENST00000493222	PMAIP1	Q13794	54 aa		5.48	□□□□□ -1.53
UGP2-223	ENST00000493222	KRTAP4-2	Q9BYR5	136 aa		5.35	□□□□□ -1.55
UGP2-223	ENST00000493222	LCE1E	Q5T753	118 aa		5.3	□□□□□ -1.56
UGP2-223	ENST00000493222	KTN1-AS1	Q86SY8	53 aa		5.24	□□□□□ -1.57
UGP2-223	ENST00000493222	LCE1B	Q5T7P3	118 aa		5.04	□□□□□ -1.6
UGP2-223	ENST00000493222	LCE1F	Q5T754	118 aa		5.02	□□□□□ -1.61
UGP2-223	ENST00000493222	LCE1C	Q5T751	118 aa		4.93	□□□□□ -1.62
UGP2-223	ENST00000493222	LUZP6	Q538Z0	58 aa		4.67	□□□□□ -1.66
UGP2-223	ENST00000493222	LCE3D	Q9BYE3	92 aa		4.61	□□□□□ -1.67
UGP2-223	ENST00000493222	KRTAP5-11	Q6L8G4	156 aa		4.49	□□□□□ -1.69
UGP2-223	ENST00000493222	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.46	□□□□□ -1.7
UGP2-223	ENST00000493222	LCE3E	Q5T5B0	92 aa		4.3	□□□□□ -1.72
UGP2-223	ENST00000493222	KRTAP21-2	Q3LI59	83 aa		4.11	□□□□□ -1.75
UGP2-223	ENST00000493222	PHGR1	C9JFL3	82 aa		4.06	□□□□□ -1.76
UGP2-223	ENST00000493222	KRTAP4-4	Q9BYR3	166 aa		3.81	□□□□□ -1.8
UGP2-223	ENST00000493222	MUC19	Q7Z5P9	8384 aa		3.59	□□□□□ -1.84
UGP2-223	ENST00000493222	INE1	O15225	51 aa		3.44	□□□□□ -1.86
UGP2-223	ENST00000493222	PRM1	P04553	51 aa		3.14	□□□□□ -1.91
UGP2-223	ENST00000493222	KRTAP21-1	Q3LI58	79 aa		3.08	□□□□□ -1.92
UGP2-223	ENST00000493222	MUC16	Q8WXI7	14507 aa		2.55	□□□□□ -2

Retrieved 78 of 20,778 RNA–protein pairs in 68.8 ms