RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 KRTAP10-12P60413 245 aa5.54□□□□□ -1.52
PTPN7-216ENST00000492977 USH2AO75445 5202 aa5.52□□□□□ -1.53
PTPN7-216ENST00000492977 KRTAP8-1Q8IUC2 63 aa5.49□□□□□ -1.53
PTPN7-216ENST00000492977 KRTAP19-6Q3LI70 58 aa5.42□□□□□ -1.54
PTPN7-216ENST00000492977 FSIP2Q5CZC0 6907 aa5.4□□□□□ -1.54
PTPN7-216ENST00000492977 KRTAP2-2Q9BYT5 123 aa5.38□□□□□ -1.55
PTPN7-216ENST00000492977 KRTAP12-3P60328 96 aa5.36□□□□□ -1.55
PTPN7-216ENST00000492977 SSPOA2VEC9 5147 aa5.33□□□□□ -1.56
PTPN7-216ENST00000492977 LUZP6Q538Z0 58 aa5.33□□□□□ -1.56
PTPN7-216ENST00000492977 CRCT1Q9UGL9 99 aa5.29□□□□□ -1.56
PTPN7-216ENST00000492977 KRTAP19-5Q3LI72 72 aa5.25□□□□□ -1.57
PTPN7-216ENST00000492977 SPRR5A0A1B0GTR4 108 aa5.21□□□□□ -1.57
PTPN7-216ENST00000492977 LCE1FQ5T754 118 aa5.21□□□□□ -1.57
PTPN7-216ENST00000492977 KRTAP19-7Q3SYF9 63 aa5.14□□□□□ -1.59
PTPN7-216ENST00000492977 KMT2DO14686 5537 aa5.14□□□□□ -1.59
PTPN7-216ENST00000492977 FCGBPQ9Y6R7 5405 aaPredicted RBP5.07□□□□□ -1.6
PTPN7-216ENST00000492977 MT1EP04732 61 aa5.04□□□□□ -1.6
PTPN7-216ENST00000492977 LCE3CQ5T5A8 94 aa5.03□□□□□ -1.6
PTPN7-216ENST00000492977 KRTAP5-3Q6L8H2 238 aa4.99□□□□□ -1.61
PTPN7-216ENST00000492977 MT1LQ93083 61 aa4.98□□□□□ -1.61
PTPN7-216ENST00000492977 KRTAP19-3Q7Z4W3 81 aa4.82□□□□□ -1.64
PTPN7-216ENST00000492977 SPRR2FQ96RM1 72 aa4.82□□□□□ -1.64
PTPN7-216ENST00000492977 MACF1Q9UPN3 7388 aaKnown RBP4.81□□□□□ -1.64
PTPN7-216ENST00000492977 MT1GP13640 62 aa4.8□□□□□ -1.64
PTPN7-216ENST00000492977 SYNE2Q8WXH0 6885 aaKnown RBP4.79□□□□□ -1.64
PTPN7-216ENST00000492977 KRTAP9-6A8MVA2 160 aa4.74□□□□□ -1.65
PTPN7-216ENST00000492977 INE1O15225 51 aa4.74□□□□□ -1.65
PTPN7-216ENST00000492977 MT1MQ8N339 61 aa4.74□□□□□ -1.65
PTPN7-216ENST00000492977 KRTAP5-9P26371 169 aa4.73□□□□□ -1.65
PTPN7-216ENST00000492977 MUC12Q9UKN1 5478 aa4.68□□□□□ -1.66
PTPN7-216ENST00000492977 KRTAP4-3Q9BYR4 195 aa4.64□□□□□ -1.67
PTPN7-216ENST00000492977 KRTAP6-3Q3LI67 103 aa4.61□□□□□ -1.67
PTPN7-216ENST00000492977 SPRR2EP22531 72 aa4.53□□□□□ -1.68
PTPN7-216ENST00000492977 SPRR2BP35325 72 aa4.53□□□□□ -1.68
PTPN7-216ENST00000492977 SPRR2AP35326 72 aa4.53□□□□□ -1.68
PTPN7-216ENST00000492977 KRTAP2-3P0C7H8 128 aa4.48□□□□□ -1.69
PTPN7-216ENST00000492977 KRTAP2-4Q9BYR9 128 aa4.48□□□□□ -1.69
PTPN7-216ENST00000492977 KRTAP2-1Q9BYU5 128 aa4.48□□□□□ -1.69
PTPN7-216ENST00000492977 NEBP20929 6669 aa4.46□□□□□ -1.7
PTPN7-216ENST00000492977 MDN1Q9NU22 5596 aa4.44□□□□□ -1.7
PTPN7-216ENST00000492977 LCE3EQ5T5B0 92 aa4.44□□□□□ -1.7
PTPN7-216ENST00000492977 LCE1EQ5T753 118 aa4.44□□□□□ -1.7
PTPN7-216ENST00000492977 SPRR2DP22532 72 aa4.36□□□□□ -1.71
PTPN7-216ENST00000492977 DSTQ03001 7570 aaKnown RBP4.35□□□□□ -1.71
PTPN7-216ENST00000492977 KRTAP20-1Q3LI63 56 aa4.32□□□□□ -1.72
PTPN7-216ENST00000492977 KRTAP5-5Q701N2 237 aaPredicted RBP4.26□□□□□ -1.73
PTPN7-216ENST00000492977 MT1AP04731 61 aa4.23□□□□□ -1.73
PTPN7-216ENST00000492977 KRTAP6-1Q3LI64 71 aa4.18□□□□□ -1.74
PTPN7-216ENST00000492977 KRTAP5-11Q6L8G4 156 aa4.12□□□□□ -1.75
PTPN7-216ENST00000492977 KRTAP5-4Q6L8H1 288 aa3.99□□□□□ -1.77
PTPN7-216ENST00000492977 SYNE1Q8NF91 8797 aaKnown RBP3.93□□□□□ -1.78
PTPN7-216ENST00000492977 KRTAP12-4P60329 112 aa3.93□□□□□ -1.78
PTPN7-216ENST00000492977 LCE3DQ9BYE3 92 aa3.83□□□□□ -1.8
PTPN7-216ENST00000492977 KRTAP6-2Q3LI66 62 aa3.82□□□□□ -1.8
PTPN7-216ENST00000492977 GPR98Q8WXG9 6306 aa3.79□□□□□ -1.8
PTPN7-216ENST00000492977 MT4P47944 62 aa3.77□□□□□ -1.81
PTPN7-216ENST00000492977 KRTAP20-2Q3LI61 65 aa3.72□□□□□ -1.81
PTPN7-216ENST00000492977 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.67□□□□□ -1.82
PTPN7-216ENST00000492977 KRTAP5-2Q701N4 177 aa3.65□□□□□ -1.82
PTPN7-216ENST00000492977 HMCN1Q96RW7 5635 aa3.61□□□□□ -1.83
PTPN7-216ENST00000492977 AHNAK2Q8IVF2 5795 aa3.47□□□□□ -1.85
PTPN7-216ENST00000492977 OBSCNQ5VST9 7968 aa3.42□□□□□ -1.86
PTPN7-216ENST00000492977 KRTAP5-1Q6L8H4 278 aa3.38□□□□□ -1.87
PTPN7-216ENST00000492977 KRTAP5-10Q6L8G5 202 aa3.37□□□□□ -1.87
PTPN7-216ENST00000492977 PRM1P04553 51 aa3.3□□□□□ -1.88
PTPN7-216ENST00000492977 KRTAP5-7Q6L8G8 165 aa3.27□□□□□ -1.89
PTPN7-216ENST00000492977 LCE1BQ5T7P3 118 aa3.08□□□□□ -1.92
PTPN7-216ENST00000492977 LCE1CQ5T751 118 aa3.07□□□□□ -1.92
PTPN7-216ENST00000492977 KRTAP4-4Q9BYR3 166 aa3.07□□□□□ -1.92
PTPN7-216ENST00000492977 KRTAP5-8O75690 187 aa3.06□□□□□ -1.92
PTPN7-216ENST00000492977 MUC5ACP98088 5654 aa3.02□□□□□ -1.93
PTPN7-216ENST00000492977 AHNAKQ09666 5890 aaKnown RBP2.91□□□□□ -1.94
PTPN7-216ENST00000492977 MUC5BQ9HC84 5762 aaPredicted RBP2.86□□□□□ -1.95
PTPN7-216ENST00000492977 KRTAP21-2Q3LI59 83 aa2.74□□□□□ -1.97
PTPN7-216ENST00000492977 MUC19Q7Z5P9 8384 aa2.37□□□□□ -2.03
PTPN7-216ENST00000492977 PHGR1C9JFL3 82 aa2.31□□□□□ -2.04
PTPN7-216ENST00000492977 KRTAP21-1Q3LI58 79 aa2.12□□□□□ -2.07
PTPN7-216ENST00000492977 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 110.6 ms