RNA–Protein interactions for RNA: ENST00000492887.5

FDPS-218, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-218ENST00000492887 PRAC1Q96KF2 57 aa3.25□□□□□ -1.89
FDPS-218ENST00000492887 KRTAP10-12P60413 245 aa3.21□□□□□ -1.9
FDPS-218ENST00000492887 KRTAP5-11Q6L8G4 156 aa3.2□□□□□ -1.9
FDPS-218ENST00000492887 LCE1AQ5T7P2 110 aa3.18□□□□□ -1.9
FDPS-218ENST00000492887 LCE3AQ5TA76 89 aa3.15□□□□□ -1.91
FDPS-218ENST00000492887 PP632Q6XCG6 107 aa3.14□□□□□ -1.91
FDPS-218ENST00000492887 FCGBPQ9Y6R7 5405 aaPredicted RBP3.12□□□□□ -1.91
FDPS-218ENST00000492887 LCE1EQ5T753 118 aa3.11□□□□□ -1.91
FDPS-218ENST00000492887 KRTAP8-1Q8IUC2 63 aa3.08□□□□□ -1.92
FDPS-218ENST00000492887 KMT2DO14686 5537 aa3.07□□□□□ -1.92
FDPS-218ENST00000492887 A0A0A0MQY5 61 aa3.06□□□□□ -1.92
FDPS-218ENST00000492887 KRTAP12-3P60328 96 aa3.02□□□□□ -1.93
FDPS-218ENST00000492887 KRTAP19-5Q3LI72 72 aa3.02□□□□□ -1.93
FDPS-218ENST00000492887 KRTAP2-2Q9BYT5 123 aa3.01□□□□□ -1.93
FDPS-218ENST00000492887 MACF1Q9UPN3 7388 aaKnown RBP3.01□□□□□ -1.93
FDPS-218ENST00000492887 SYNE2Q8WXH0 6885 aaKnown RBP2.98□□□□□ -1.93
FDPS-218ENST00000492887 SPRR2FQ96RM1 72 aa2.98□□□□□ -1.93
FDPS-218ENST00000492887 KRTAP19-7Q3SYF9 63 aa2.95□□□□□ -1.94
FDPS-218ENST00000492887 MT1EP04732 61 aa2.93□□□□□ -1.94
FDPS-218ENST00000492887 KRTAP6-3Q3LI67 103 aa2.88□□□□□ -1.95
FDPS-218ENST00000492887 KRTAP5-1Q6L8H4 278 aa2.88□□□□□ -1.95
FDPS-218ENST00000492887 KRTAP5-9P26371 169 aa2.87□□□□□ -1.95
FDPS-218ENST00000492887 SPRR2EP22531 72 aa2.86□□□□□ -1.95
FDPS-218ENST00000492887 SPRR2BP35325 72 aa2.86□□□□□ -1.95
FDPS-218ENST00000492887 SPRR2AP35326 72 aa2.86□□□□□ -1.95
FDPS-218ENST00000492887 MT1LQ93083 61 aa2.85□□□□□ -1.95
FDPS-218ENST00000492887 KRTAP5-4Q6L8H1 288 aa2.84□□□□□ -1.95
FDPS-218ENST00000492887 KRTAP19-3Q7Z4W3 81 aa2.84□□□□□ -1.95
FDPS-218ENST00000492887 MUC12Q9UKN1 5478 aa2.84□□□□□ -1.95
FDPS-218ENST00000492887 MT3P25713 68 aa2.82□□□□□ -1.96
FDPS-218ENST00000492887 NEBP20929 6669 aa2.8□□□□□ -1.96
FDPS-218ENST00000492887 MT1GP13640 62 aa2.8□□□□□ -1.96
FDPS-218ENST00000492887 LCE3CQ5T5A8 94 aa2.79□□□□□ -1.96
FDPS-218ENST00000492887 MT1MQ8N339 61 aa2.77□□□□□ -1.97
FDPS-218ENST00000492887 SPRR2DP22532 72 aa2.76□□□□□ -1.97
FDPS-218ENST00000492887 KRTAP4-4Q9BYR3 166 aa2.75□□□□□ -1.97
FDPS-218ENST00000492887 MDN1Q9NU22 5596 aa2.72□□□□□ -1.97
FDPS-218ENST00000492887 KRTAP4-3Q9BYR4 195 aa2.72□□□□□ -1.97
FDPS-218ENST00000492887 LUZP6Q538Z0 58 aa2.71□□□□□ -1.98
FDPS-218ENST00000492887 SPRR5A0A1B0GTR4 108 aa2.67□□□□□ -1.98
FDPS-218ENST00000492887 KRTAP20-1Q3LI63 56 aa2.66□□□□□ -1.98
FDPS-218ENST00000492887 KRTAP9-6A8MVA2 160 aa2.61□□□□□ -1.99
FDPS-218ENST00000492887 KRTAP2-3P0C7H8 128 aa2.58□□□□□ -2
FDPS-218ENST00000492887 KRTAP2-4Q9BYR9 128 aa2.58□□□□□ -2
FDPS-218ENST00000492887 DSTQ03001 7570 aaKnown RBP2.58□□□□□ -2
FDPS-218ENST00000492887 NDUFAF8A1L188 74 aa2.56□□□□□ -2
FDPS-218ENST00000492887 KRTAP2-1Q9BYU5 128 aa2.5□□□□□ -2.01
FDPS-218ENST00000492887 OBSCNQ5VST9 7968 aa2.48□□□□□ -2.01
FDPS-218ENST00000492887 MT1AP04731 61 aa2.44□□□□□ -2.02
FDPS-218ENST00000492887 KRTAP5-5Q701N2 237 aaPredicted RBP2.44□□□□□ -2.02
FDPS-218ENST00000492887 KRTAP6-1Q3LI64 71 aa2.42□□□□□ -2.02
FDPS-218ENST00000492887 MT4P47944 62 aa2.39□□□□□ -2.03
FDPS-218ENST00000492887 KRTAP12-4P60329 112 aa2.38□□□□□ -2.03
FDPS-218ENST00000492887 SYNE1Q8NF91 8797 aaKnown RBP2.34□□□□□ -2.03
FDPS-218ENST00000492887 KRTAP5-2Q701N4 177 aa2.34□□□□□ -2.03
FDPS-218ENST00000492887 GPR98Q8WXG9 6306 aa2.33□□□□□ -2.04
FDPS-218ENST00000492887 KRTAP20-2Q3LI61 65 aa2.26□□□□□ -2.05
FDPS-218ENST00000492887 INE1O15225 51 aa2.24□□□□□ -2.05
FDPS-218ENST00000492887 KRTAP6-2Q3LI66 62 aa2.24□□□□□ -2.05
FDPS-218ENST00000492887 LCE1FQ5T754 118 aa2.21□□□□□ -2.06
FDPS-218ENST00000492887 HMCN1Q96RW7 5635 aa2.2□□□□□ -2.06
FDPS-218ENST00000492887 KRTAP5-10Q6L8G5 202 aa2.13□□□□□ -2.07
FDPS-218ENST00000492887 AHNAK2Q8IVF2 5795 aa2.12□□□□□ -2.07
FDPS-218ENST00000492887 LCE3DQ9BYE3 92 aa2.1□□□□□ -2.07
FDPS-218ENST00000492887 KRTAP5-7Q6L8G8 165 aa2.06□□□□□ -2.08
FDPS-218ENST00000492887 LCE3EQ5T5B0 92 aa2.05□□□□□ -2.08
FDPS-218ENST00000492887 KRTAP5-8O75690 187 aa2.03□□□□□ -2.08
FDPS-218ENST00000492887 LCE1CQ5T751 118 aa2□□□□□ -2.09
FDPS-218ENST00000492887 LCE1BQ5T7P3 118 aa2□□□□□ -2.09
FDPS-218ENST00000492887 MUC5ACP98088 5654 aa1.79□□□□□ -2.12
FDPS-218ENST00000492887 MUC5BQ9HC84 5762 aaPredicted RBP1.78□□□□□ -2.12
FDPS-218ENST00000492887 PRM1P04553 51 aa1.77□□□□□ -2.13
FDPS-218ENST00000492887 AHNAKQ09666 5890 aaKnown RBP1.76□□□□□ -2.13
FDPS-218ENST00000492887 MUC19Q7Z5P9 8384 aa1.65□□□□□ -2.15
FDPS-218ENST00000492887 KRTAP21-2Q3LI59 83 aa1.54□□□□□ -2.16
FDPS-218ENST00000492887 PHGR1C9JFL3 82 aa1.34□□□□□ -2.19
FDPS-218ENST00000492887 KRTAP21-1Q3LI58 79 aa1.01□□□□□ -2.25
FDPS-218ENST00000492887 MUC16Q8WXI7 14507 aa0.91□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 6.1 ms