RNA–Protein interactions for RNA: ENST00000492468.5

PABPC4-216, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 2,257 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-216ENST00000492468 MT1EP04732 61 aa4.94□□□□□ -1.62
PABPC4-216ENST00000492468 KRTAP9-2Q9BYQ4 174 aa4.79□□□□□ -1.64
PABPC4-216ENST00000492468 FSIP2Q5CZC0 6907 aa4.73□□□□□ -1.65
PABPC4-216ENST00000492468 KRTAP12-4P60329 112 aa4.71□□□□□ -1.66
PABPC4-216ENST00000492468 KRTAP4-3Q9BYR4 195 aa4.69□□□□□ -1.66
PABPC4-216ENST00000492468 MT1GP13640 62 aa4.67□□□□□ -1.66
PABPC4-216ENST00000492468 SSPOA2VEC9 5147 aa4.64□□□□□ -1.67
PABPC4-216ENST00000492468 KRTAP19-6Q3LI70 58 aa4.61□□□□□ -1.67
PABPC4-216ENST00000492468 MT1MQ8N339 61 aa4.59□□□□□ -1.67
PABPC4-216ENST00000492468 CRCT1Q9UGL9 99 aa4.59□□□□□ -1.67
PABPC4-216ENST00000492468 KRTAP19-3Q7Z4W3 81 aa4.53□□□□□ -1.68
PABPC4-216ENST00000492468 KRTAP9-6A0A140TA67 174 aa4.48□□□□□ -1.69
PABPC4-216ENST00000492468 FCGBPQ9Y6R7 5405 aaPredicted RBP4.48□□□□□ -1.69
PABPC4-216ENST00000492468 LCE3BQ5TA77 95 aa4.41□□□□□ -1.7
PABPC4-216ENST00000492468 MT1AP04731 61 aa4.39□□□□□ -1.71
PABPC4-216ENST00000492468 KRTAP4-9Q9BYQ8 210 aa4.38□□□□□ -1.71
PABPC4-216ENST00000492468 MUC12Q9UKN1 5478 aa4.37□□□□□ -1.71
PABPC4-216ENST00000492468 LCE5AQ5TCM9 118 aa4.33□□□□□ -1.72
PABPC4-216ENST00000492468 MACF1Q9UPN3 7388 aaKnown RBP4.28□□□□□ -1.72
PABPC4-216ENST00000492468 KRTAP5-5Q701N2 237 aaPredicted RBP4.26□□□□□ -1.73
PABPC4-216ENST00000492468 LCE3DQ9BYE3 92 aa4.26□□□□□ -1.73
PABPC4-216ENST00000492468 SYNE1Q8NF91 8797 aaKnown RBP4.26□□□□□ -1.73
PABPC4-216ENST00000492468 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.25□□□□□ -1.73
PABPC4-216ENST00000492468 KRTAP9-7A8MTY7 169 aa4.24□□□□□ -1.73
PABPC4-216ENST00000492468 KRTAP6-1Q3LI64 71 aa4.24□□□□□ -1.73
PABPC4-216ENST00000492468 LCE3EQ5T5B0 92 aa4.24□□□□□ -1.73
PABPC4-216ENST00000492468 PRM1P04553 51 aa4.22□□□□□ -1.73
PABPC4-216ENST00000492468 SYNE2Q8WXH0 6885 aaKnown RBP4.21□□□□□ -1.74
PABPC4-216ENST00000492468 DSTQ03001 7570 aaKnown RBP4.19□□□□□ -1.74
PABPC4-216ENST00000492468 SPRR2FQ96RM1 72 aa4.15□□□□□ -1.74
PABPC4-216ENST00000492468 KRTAP6-3Q3LI67 103 aa4.12□□□□□ -1.75
PABPC4-216ENST00000492468 KRTAP5-9P26371 169 aa4.11□□□□□ -1.75
PABPC4-216ENST00000492468 KRTAP9-9Q9BYP9 154 aa4.02□□□□□ -1.77
PABPC4-216ENST00000492468 KRTAP9-4Q9BYQ2 154 aa4.02□□□□□ -1.77
PABPC4-216ENST00000492468 KRTAP6-2Q3LI66 62 aa4□□□□□ -1.77
PABPC4-216ENST00000492468 KRTAP4-12Q9BQ66 201 aa3.94□□□□□ -1.78
PABPC4-216ENST00000492468 MDN1Q9NU22 5596 aa3.93□□□□□ -1.78
PABPC4-216ENST00000492468 LCE1AQ5T7P2 110 aa3.92□□□□□ -1.78
PABPC4-216ENST00000492468 LCE1DQ5T752 114 aa3.88□□□□□ -1.79
PABPC4-216ENST00000492468 SPRR2EP22531 72 aa3.88□□□□□ -1.79
PABPC4-216ENST00000492468 SPRR2BP35325 72 aa3.88□□□□□ -1.79
PABPC4-216ENST00000492468 SPRR2AP35326 72 aa3.88□□□□□ -1.79
PABPC4-216ENST00000492468 KRTAP5-3Q6L8H2 238 aa3.86□□□□□ -1.79
PABPC4-216ENST00000492468 NEBP20929 6669 aa3.85□□□□□ -1.79
PABPC4-216ENST00000492468 KRTAP4-2Q9BYR5 136 aa3.84□□□□□ -1.79
PABPC4-216ENST00000492468 KRTAP2-2Q9BYT5 123 aa3.81□□□□□ -1.8
PABPC4-216ENST00000492468 LCE4AQ5TA78 99 aa3.78□□□□□ -1.8
PABPC4-216ENST00000492468 SPRR2DP22532 72 aa3.74□□□□□ -1.81
PABPC4-216ENST00000492468 MT3P25713 68 aa3.71□□□□□ -1.82
PABPC4-216ENST00000492468 LCE1FQ5T754 118 aa3.61□□□□□ -1.83
PABPC4-216ENST00000492468 KRTAP20-1Q3LI63 56 aa3.59□□□□□ -1.83
PABPC4-216ENST00000492468 KRTAP4-11Q9BYQ6 195 aa3.59□□□□□ -1.84
PABPC4-216ENST00000492468 OBSCNQ5VST9 7968 aa3.55□□□□□ -1.84
PABPC4-216ENST00000492468 KRTAP5-4Q6L8H1 288 aa3.4□□□□□ -1.87
PABPC4-216ENST00000492468 LCE1EQ5T753 118 aa3.37□□□□□ -1.87
PABPC4-216ENST00000492468 MT4P47944 62 aa3.24□□□□□ -1.89
PABPC4-216ENST00000492468 KRTAP5-2Q701N4 177 aa3.22□□□□□ -1.89
PABPC4-216ENST00000492468 MUC5ACP98088 5654 aa3.19□□□□□ -1.9
PABPC4-216ENST00000492468 HMCN1Q96RW7 5635 aa3.19□□□□□ -1.9
PABPC4-216ENST00000492468 KRTAP20-2Q3LI61 65 aa3.16□□□□□ -1.9
PABPC4-216ENST00000492468 KRTAP5-10Q6L8G5 202 aa3.11□□□□□ -1.91
PABPC4-216ENST00000492468 GPR98Q8WXG9 6306 aa3.03□□□□□ -1.92
PABPC4-216ENST00000492468 KRTAP5-1Q6L8H4 278 aa3.03□□□□□ -1.92
PABPC4-216ENST00000492468 LCE1BQ5T7P3 118 aa2.92□□□□□ -1.94
PABPC4-216ENST00000492468 AHNAK2Q8IVF2 5795 aa2.86□□□□□ -1.95
PABPC4-216ENST00000492468 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.81□□□□□ -1.96
PABPC4-216ENST00000492468 LCE1CQ5T751 118 aa2.8□□□□□ -1.96
PABPC4-216ENST00000492468 KRTAP21-2Q3LI59 83 aa2.73□□□□□ -1.97
PABPC4-216ENST00000492468 KRTAP21-1Q3LI58 79 aa2.73□□□□□ -1.97
PABPC4-216ENST00000492468 KRTAP5-8O75690 187 aa2.69□□□□□ -1.98
PABPC4-216ENST00000492468 KRTAP5-7Q6L8G8 165 aa2.66□□□□□ -1.98
PABPC4-216ENST00000492468 MUC5BQ9HC84 5762 aaPredicted RBP2.52□□□□□ -2.01
PABPC4-216ENST00000492468 AHNAKQ09666 5890 aaKnown RBP2.48□□□□□ -2.01
PABPC4-216ENST00000492468 KRTAP4-4Q9BYR3 166 aa2.47□□□□□ -2.01
PABPC4-216ENST00000492468 MUC19Q7Z5P9 8384 aa2.42□□□□□ -2.02
PABPC4-216ENST00000492468 KRTAP5-11Q6L8G4 156 aa2.38□□□□□ -2.03
PABPC4-216ENST00000492468 PHGR1C9JFL3 82 aa2.05□□□□□ -2.08
PABPC4-216ENST00000492468 MUC16Q8WXI7 14507 aa1.42□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 725.6 ms