RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 PRR15LQ9BU68 103 aa3.12□□□□□ -1.91
NUP50-217ENST00000491860 MT1MQ8N339 61 aa3.1□□□□□ -1.91
NUP50-217ENST00000491860 MT1LQ93083 61 aa3.1□□□□□ -1.91
NUP50-217ENST00000491860 ANAPC13Q9BS18 74 aa3.1□□□□□ -1.91
NUP50-217ENST00000491860 KRTAP5-4Q6L8H1 288 aa3.08□□□□□ -1.92
NUP50-217ENST00000491860 C10orf95Q9H7T3 257 aa3.08□□□□□ -1.92
NUP50-217ENST00000491860 A8MU10 97 aa3.06□□□□□ -1.92
NUP50-217ENST00000491860 ATP5EP56381 51 aaPredicted RBP3.06□□□□□ -1.92
NUP50-217ENST00000491860 LCE3AQ5TA76 89 aa3.06□□□□□ -1.92
NUP50-217ENST00000491860 KRTAP5-3Q6L8H2 238 aa3.03□□□□□ -1.92
NUP50-217ENST00000491860 LINC01558Q9Y6Z2 57 aa2.99□□□□□ -1.93
NUP50-217ENST00000491860 KRTAP12-3P60328 96 aa2.98□□□□□ -1.93
NUP50-217ENST00000491860 UQCR11O14957 56 aa2.97□□□□□ -1.93
NUP50-217ENST00000491860 KRTAP4-3Q9BYR4 195 aa2.96□□□□□ -1.94
NUP50-217ENST00000491860 CCDC179H3BU77 68 aa2.94□□□□□ -1.94
NUP50-217ENST00000491860 SPRR5A0A1B0GTR4 108 aa2.93□□□□□ -1.94
NUP50-217ENST00000491860 KRTAP19-4Q3LI73 84 aa2.93□□□□□ -1.94
NUP50-217ENST00000491860 K7ERS5 55 aa2.92□□□□□ -1.94
NUP50-217ENST00000491860 KRTAP25-1Q3LHN0 102 aa2.92□□□□□ -1.94
NUP50-217ENST00000491860 TMEM258P61165 79 aa2.91□□□□□ -1.94
NUP50-217ENST00000491860 KRTAP4-12Q9BQ66 201 aa2.91□□□□□ -1.94
NUP50-217ENST00000491860 KRTAP20-2Q3LI61 65 aa2.9□□□□□ -1.95
NUP50-217ENST00000491860 RPS28P62857 69 aaKnown RBP2.89□□□□□ -1.95
NUP50-217ENST00000491860 KRTAP12-4P60329 112 aa2.87□□□□□ -1.95
NUP50-217ENST00000491860 MIR22HGQ0VDD5 57 aa2.87□□□□□ -1.95
NUP50-217ENST00000491860 KRTAP4-7Q9BYR0 210 aa2.87□□□□□ -1.95
NUP50-217ENST00000491860 KRTAP5-5Q701N2 237 aaPredicted RBP2.85□□□□□ -1.95
NUP50-217ENST00000491860 KRTAP23-1A1A580 65 aa2.84□□□□□ -1.95
NUP50-217ENST00000491860 KRTAP9-9Q9BYP9 154 aa2.84□□□□□ -1.95
NUP50-217ENST00000491860 KRTAP9-4Q9BYQ2 154 aa2.84□□□□□ -1.95
NUP50-217ENST00000491860 V9GYY9 64 aa2.83□□□□□ -1.96
NUP50-217ENST00000491860 AHNAKQ09666 5890 aaKnown RBP2.79□□□□□ -1.96
NUP50-217ENST00000491860 SYNE1Q8NF91 8797 aaKnown RBP2.77□□□□□ -1.97
NUP50-217ENST00000491860 KRTAP15-1Q3LI76 137 aa2.76□□□□□ -1.97
NUP50-217ENST00000491860 Q1T7F1 81 aa2.74□□□□□ -1.97
NUP50-217ENST00000491860 LCE3CQ5T5A8 94 aa2.73□□□□□ -1.97
NUP50-217ENST00000491860 MUC5ACP98088 5654 aa2.72□□□□□ -1.97
NUP50-217ENST00000491860 PSPHP1O15172 72 aa2.72□□□□□ -1.97
NUP50-217ENST00000491860 KRTAP4-11Q9BYQ6 195 aa2.72□□□□□ -1.97
NUP50-217ENST00000491860 CDC42SE1Q9NRR8 79 aa2.71□□□□□ -1.98
NUP50-217ENST00000491860 MUC5BQ9HC84 5762 aaPredicted RBP2.68□□□□□ -1.98
NUP50-217ENST00000491860 A6NED7 52 aa2.67□□□□□ -1.98
NUP50-217ENST00000491860 MT1AP04731 61 aa2.66□□□□□ -1.98
NUP50-217ENST00000491860 KRTAP5-8O75690 187 aa2.65□□□□□ -1.99
NUP50-217ENST00000491860 KRTAP5-2Q701N4 177 aa2.64□□□□□ -1.99
NUP50-217ENST00000491860 ROMO1P60602 79 aa2.63□□□□□ -1.99
NUP50-217ENST00000491860 BRK1Q8WUW1 75 aa2.63□□□□□ -1.99
NUP50-217ENST00000491860 PRO0628Q9UI54 55 aa2.63□□□□□ -1.99
NUP50-217ENST00000491860 KRTAP6-1Q3LI64 71 aa2.6□□□□□ -1.99
NUP50-217ENST00000491860 KRTAP4-2Q9BYR5 136 aa2.58□□□□□ -2
NUP50-217ENST00000491860 PMAIP1Q13794 54 aa2.54□□□□□ -2
NUP50-217ENST00000491860 KRTAP6-2Q3LI66 62 aa2.52□□□□□ -2.01
NUP50-217ENST00000491860 OBSCNQ5VST9 7968 aa2.5□□□□□ -2.01
NUP50-217ENST00000491860 KRTAP9-6A8MVA2 160 aa2.5□□□□□ -2.01
NUP50-217ENST00000491860 MT3P25713 68 aa2.46□□□□□ -2.02
NUP50-217ENST00000491860 KRTAP5-1Q6L8H4 278 aa2.42□□□□□ -2.02
NUP50-217ENST00000491860 KTN1-AS1Q86SY8 53 aa2.4□□□□□ -2.03
NUP50-217ENST00000491860 H3BS24 57 aa2.34□□□□□ -2.03
NUP50-217ENST00000491860 LCE1EQ5T753 118 aa2.3□□□□□ -2.04
NUP50-217ENST00000491860 A0A0A0MQY5 61 aa2.29□□□□□ -2.04
NUP50-217ENST00000491860 PRAC1Q96KF2 57 aa2.23□□□□□ -2.05
NUP50-217ENST00000491860 LCE1CQ5T751 118 aa2.12□□□□□ -2.07
NUP50-217ENST00000491860 LCE1BQ5T7P3 118 aa2.12□□□□□ -2.07
NUP50-217ENST00000491860 LUZP6Q538Z0 58 aa2.02□□□□□ -2.09
NUP50-217ENST00000491860 LCE3DQ9BYE3 92 aa1.97□□□□□ -2.09
NUP50-217ENST00000491860 KRTAP5-11Q6L8G4 156 aa1.95□□□□□ -2.1
NUP50-217ENST00000491860 LCE1FQ5T754 118 aa1.93□□□□□ -2.1
NUP50-217ENST00000491860 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.92□□□□□ -2.1
NUP50-217ENST00000491860 NDUFAF8A1L188 74 aa1.91□□□□□ -2.1
NUP50-217ENST00000491860 PHGR1C9JFL3 82 aa1.85□□□□□ -2.11
NUP50-217ENST00000491860 LCE3EQ5T5B0 92 aa1.84□□□□□ -2.11
NUP50-217ENST00000491860 KRTAP21-2Q3LI59 83 aa1.72□□□□□ -2.13
NUP50-217ENST00000491860 INE1O15225 51 aa1.67□□□□□ -2.14
NUP50-217ENST00000491860 MUC19Q7Z5P9 8384 aa1.57□□□□□ -2.16
NUP50-217ENST00000491860 KRTAP4-4Q9BYR3 166 aa1.54□□□□□ -2.16
NUP50-217ENST00000491860 KRTAP21-1Q3LI58 79 aa1.43□□□□□ -2.18
NUP50-217ENST00000491860 PRM1P04553 51 aa1.3□□□□□ -2.2
NUP50-217ENST00000491860 MUC16Q8WXI7 14507 aa1.13□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 106.5 ms