RNA–Protein interactions for RNA: ENST00000491718.5

TNRC6A-207, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 1 (best)

Gene TNRC6A, Length 7,956 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-207ENST00000491718 LCE3DQ9BYE3 92 aa2.14□□□□□ -2.07
TNRC6A-207ENST00000491718 LCE3EQ5T5B0 92 aa2.14□□□□□ -2.07
TNRC6A-207ENST00000491718 FAT4Q6V0I7 4981 aa2.12□□□□□ -2.07
TNRC6A-207ENST00000491718 MT1AP04731 61 aa2.12□□□□□ -2.07
TNRC6A-207ENST00000491718 LCE2DQ5TA82 110 aaPredicted RBP2.03□□□□□ -2.08
TNRC6A-207ENST00000491718 KRTAP20-1Q3LI63 56 aa2.02□□□□□ -2.09
TNRC6A-207ENST00000491718 KRTAP4-8A0A0G2JLE6 195 aa2.02□□□□□ -2.09
TNRC6A-207ENST00000491718 KRTAP4-8Q9BYQ9 185 aa2.02□□□□□ -2.09
TNRC6A-207ENST00000491718 KRTAP19-7Q3SYF9 63 aa2.02□□□□□ -2.09
TNRC6A-207ENST00000491718 KRTAP19-3Q7Z4W3 81 aa2□□□□□ -2.09
TNRC6A-207ENST00000491718 KRTAP4-7Q9BYR0 210 aa1.99□□□□□ -2.09
TNRC6A-207ENST00000491718 KRTAP9-6A8MVA2 160 aa1.97□□□□□ -2.09
TNRC6A-207ENST00000491718 MT1MQ8N339 61 aa1.96□□□□□ -2.09
TNRC6A-207ENST00000491718 MT4P47944 62 aa1.95□□□□□ -2.1
TNRC6A-207ENST00000491718 USH2AO75445 5202 aa1.93□□□□□ -2.1
TNRC6A-207ENST00000491718 PRM1P04553 51 aa1.92□□□□□ -2.1
TNRC6A-207ENST00000491718 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.92□□□□□ -2.1
TNRC6A-207ENST00000491718 LPAP08519 4548 aa1.91□□□□□ -2.1
TNRC6A-207ENST00000491718 KRTAP19-6Q3LI70 58 aa1.88□□□□□ -2.11
TNRC6A-207ENST00000491718 SYNE2Q8WXH0 6885 aaKnown RBP1.88□□□□□ -2.11
TNRC6A-207ENST00000491718 LCE1BQ5T7P3 118 aa1.88□□□□□ -2.11
TNRC6A-207ENST00000491718 FSIP2Q5CZC0 6907 aa1.88□□□□□ -2.11
TNRC6A-207ENST00000491718 LCE1DQ5T752 114 aa1.87□□□□□ -2.11
TNRC6A-207ENST00000491718 SYNE1Q8NF91 8797 aaKnown RBP1.85□□□□□ -2.11
TNRC6A-207ENST00000491718 LOC100996750A0A140TA64 210 aa1.82□□□□□ -2.12
TNRC6A-207ENST00000491718 GPR98Q8WXG9 6306 aa1.81□□□□□ -2.12
TNRC6A-207ENST00000491718 MUC2Q02817 5179 aa1.81□□□□□ -2.12
TNRC6A-207ENST00000491718 LCE5AQ5TCM9 118 aa1.81□□□□□ -2.12
TNRC6A-207ENST00000491718 KRTAP2-2Q9BYT5 123 aa1.79□□□□□ -2.12
TNRC6A-207ENST00000491718 MUC12Q9UKN1 5478 aa1.79□□□□□ -2.12
TNRC6A-207ENST00000491718 KRTAP4-3Q9BYR4 195 aa1.78□□□□□ -2.12
TNRC6A-207ENST00000491718 LCE2AQ5TA79 106 aaPredicted RBP1.78□□□□□ -2.12
TNRC6A-207ENST00000491718 LCE1AQ5T7P2 110 aa1.76□□□□□ -2.13
TNRC6A-207ENST00000491718 NEBP20929 6669 aa1.75□□□□□ -2.13
TNRC6A-207ENST00000491718 KRTAP6-3Q3LI67 103 aa1.75□□□□□ -2.13
TNRC6A-207ENST00000491718 LCE1CQ5T751 118 aa1.74□□□□□ -2.13
TNRC6A-207ENST00000491718 LCE1EQ5T753 118 aa1.74□□□□□ -2.13
TNRC6A-207ENST00000491718 LCE1FQ5T754 118 aa1.74□□□□□ -2.13
TNRC6A-207ENST00000491718 KRTAP6-2Q3LI66 62 aa1.74□□□□□ -2.13
TNRC6A-207ENST00000491718 SSPOA2VEC9 5147 aa1.73□□□□□ -2.13
TNRC6A-207ENST00000491718 KRTAP6-1Q3LI64 71 aa1.72□□□□□ -2.13
TNRC6A-207ENST00000491718 KRTAP4-9Q9BYQ8 210 aa1.71□□□□□ -2.14
TNRC6A-207ENST00000491718 KRTAP9-4Q9BYQ2 154 aa1.7□□□□□ -2.14
TNRC6A-207ENST00000491718 DSTQ03001 7570 aaKnown RBP1.7□□□□□ -2.14
TNRC6A-207ENST00000491718 KMT2DO14686 5537 aa1.68□□□□□ -2.14
TNRC6A-207ENST00000491718 LCE4AQ5TA78 99 aa1.68□□□□□ -2.14
TNRC6A-207ENST00000491718 MDN1Q9NU22 5596 aa1.68□□□□□ -2.14
TNRC6A-207ENST00000491718 OBSCNQ5VST9 7968 aa1.66□□□□□ -2.14
TNRC6A-207ENST00000491718 KRTAP5-5Q701N2 237 aaPredicted RBP1.62□□□□□ -2.15
TNRC6A-207ENST00000491718 FCGBPQ9Y6R7 5405 aaPredicted RBP1.6□□□□□ -2.15
TNRC6A-207ENST00000491718 KRTAP9-9Q9BYP9 154 aa1.58□□□□□ -2.16
TNRC6A-207ENST00000491718 MACF1Q9UPN3 7388 aaKnown RBP1.58□□□□□ -2.16
TNRC6A-207ENST00000491718 KRTAP5-9P26371 169 aa1.48□□□□□ -2.17
TNRC6A-207ENST00000491718 AHNAK2Q8IVF2 5795 aa1.48□□□□□ -2.17
TNRC6A-207ENST00000491718 MUC19Q7Z5P9 8384 aa1.43□□□□□ -2.18
TNRC6A-207ENST00000491718 HMCN1Q96RW7 5635 aa1.39□□□□□ -2.19
TNRC6A-207ENST00000491718 MUC5BQ9HC84 5762 aaPredicted RBP1.38□□□□□ -2.19
TNRC6A-207ENST00000491718 KRTAP20-2Q3LI61 65 aa1.37□□□□□ -2.19
TNRC6A-207ENST00000491718 KRTAP4-2Q9BYR5 136 aa1.35□□□□□ -2.19
TNRC6A-207ENST00000491718 KRTAP4-11Q9BYQ6 195 aa1.35□□□□□ -2.19
TNRC6A-207ENST00000491718 KRTAP4-6Q9BYQ5 205 aa1.32□□□□□ -2.2
TNRC6A-207ENST00000491718 KRTAP5-4Q6L8H1 288 aa1.31□□□□□ -2.2
TNRC6A-207ENST00000491718 KRTAP4-12Q9BQ66 201 aa1.29□□□□□ -2.2
TNRC6A-207ENST00000491718 KRTAP5-10Q6L8G5 202 aa1.27□□□□□ -2.21
TNRC6A-207ENST00000491718 AHNAKQ09666 5890 aaKnown RBP1.25□□□□□ -2.21
TNRC6A-207ENST00000491718 KRTAP5-2Q701N4 177 aa1.24□□□□□ -2.21
TNRC6A-207ENST00000491718 KRTAP5-3Q6L8H2 238 aa1.23□□□□□ -2.21
TNRC6A-207ENST00000491718 MUC5ACP98088 5654 aa1.23□□□□□ -2.21
TNRC6A-207ENST00000491718 KRTAP4-4Q9BYR3 166 aa1.23□□□□□ -2.21
TNRC6A-207ENST00000491718 KRTAP21-1Q3LI58 79 aa1.22□□□□□ -2.21
TNRC6A-207ENST00000491718 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.21□□□□□ -2.22
TNRC6A-207ENST00000491718 KRTAP5-1Q6L8H4 278 aa1.2□□□□□ -2.22
TNRC6A-207ENST00000491718 KRTAP5-7Q6L8G8 165 aa1.14□□□□□ -2.23
TNRC6A-207ENST00000491718 KRTAP5-8O75690 187 aa1.1□□□□□ -2.23
TNRC6A-207ENST00000491718 PHGR1C9JFL3 82 aa1.09□□□□□ -2.24
TNRC6A-207ENST00000491718 KRTAP5-11Q6L8G4 156 aa1.08□□□□□ -2.24
TNRC6A-207ENST00000491718 KRTAP21-2Q3LI59 83 aa1.02□□□□□ -2.25
TNRC6A-207ENST00000491718 MUC16Q8WXI7 14507 aa0.65□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 12 ms