RNA–Protein interactions for RNA: ENST00000491291.1

PGK1-205, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 5

Gene PGK1, Length 702 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-205ENST00000491291 LCE3AQ5TA76 89 aa3.43□□□□□ -1.86
PGK1-205ENST00000491291 KRTAP6-3Q3LI67 103 aa3.41□□□□□ -1.86
PGK1-205ENST00000491291 KMT2DO14686 5537 aa3.39□□□□□ -1.87
PGK1-205ENST00000491291 KRTAP23-1A1A580 65 aa3.39□□□□□ -1.87
PGK1-205ENST00000491291 SYNE2Q8WXH0 6885 aaKnown RBP3.37□□□□□ -1.87
PGK1-205ENST00000491291 KRTAP5-9P26371 169 aa3.37□□□□□ -1.87
PGK1-205ENST00000491291 SPRR2FQ96RM1 72 aa3.37□□□□□ -1.87
PGK1-205ENST00000491291 KRTAP19-5Q3LI72 72 aa3.35□□□□□ -1.87
PGK1-205ENST00000491291 PP632Q6XCG6 107 aa3.35□□□□□ -1.87
PGK1-205ENST00000491291 KRTAP19-7Q3SYF9 63 aa3.33□□□□□ -1.88
PGK1-205ENST00000491291 MT1EP04732 61 aa3.29□□□□□ -1.88
PGK1-205ENST00000491291 KRTAP12-3P60328 96 aa3.29□□□□□ -1.88
PGK1-205ENST00000491291 KTN1-AS1Q86SY8 53 aa3.28□□□□□ -1.88
PGK1-205ENST00000491291 PRAC1Q96KF2 57 aa3.27□□□□□ -1.89
PGK1-205ENST00000491291 SPRR2EP22531 72 aa3.26□□□□□ -1.89
PGK1-205ENST00000491291 SPRR2BP35325 72 aa3.26□□□□□ -1.89
PGK1-205ENST00000491291 SPRR2AP35326 72 aa3.26□□□□□ -1.89
PGK1-205ENST00000491291 LCE1AQ5T7P2 110 aa3.23□□□□□ -1.89
PGK1-205ENST00000491291 KRTAP19-3Q7Z4W3 81 aa3.21□□□□□ -1.9
PGK1-205ENST00000491291 MT1LQ93083 61 aa3.2□□□□□ -1.9
PGK1-205ENST00000491291 KRTAP15-1Q3LI76 137 aa3.19□□□□□ -1.9
PGK1-205ENST00000491291 MUC12Q9UKN1 5478 aa3.19□□□□□ -1.9
PGK1-205ENST00000491291 MT1GP13640 62 aa3.17□□□□□ -1.9
PGK1-205ENST00000491291 NEBP20929 6669 aa3.15□□□□□ -1.91
PGK1-205ENST00000491291 SPRR2DP22532 72 aa3.14□□□□□ -1.91
PGK1-205ENST00000491291 MT1MQ8N339 61 aa3.12□□□□□ -1.91
PGK1-205ENST00000491291 MDN1Q9NU22 5596 aa3.09□□□□□ -1.91
PGK1-205ENST00000491291 LCE3CQ5T5A8 94 aa3.07□□□□□ -1.92
PGK1-205ENST00000491291 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.07□□□□□ -1.92
PGK1-205ENST00000491291 KRTAP4-3Q9BYR4 195 aa3.04□□□□□ -1.92
PGK1-205ENST00000491291 KRTAP20-1Q3LI63 56 aa3.03□□□□□ -1.92
PGK1-205ENST00000491291 KRTAP2-3P0C7H8 128 aa3.02□□□□□ -1.93
PGK1-205ENST00000491291 KRTAP2-4Q9BYR9 128 aa3.02□□□□□ -1.93
PGK1-205ENST00000491291 A0A0A0MQY5 61 aa2.98□□□□□ -1.93
PGK1-205ENST00000491291 KRTAP2-2Q9BYT5 123 aa2.95□□□□□ -1.94
PGK1-205ENST00000491291 KRTAP2-1Q9BYU5 128 aa2.95□□□□□ -1.94
PGK1-205ENST00000491291 DSTQ03001 7570 aaKnown RBP2.91□□□□□ -1.94
PGK1-205ENST00000491291 SPRR5A0A1B0GTR4 108 aa2.87□□□□□ -1.95
PGK1-205ENST00000491291 KRTAP9-6A8MVA2 160 aa2.86□□□□□ -1.95
PGK1-205ENST00000491291 KRTAP5-5Q701N2 237 aaPredicted RBP2.81□□□□□ -1.96
PGK1-205ENST00000491291 KRTAP5-4Q6L8H1 288 aa2.77□□□□□ -1.97
PGK1-205ENST00000491291 MT1AP04731 61 aa2.74□□□□□ -1.97
PGK1-205ENST00000491291 LUZP6Q538Z0 58 aa2.73□□□□□ -1.97
PGK1-205ENST00000491291 MT4P47944 62 aa2.72□□□□□ -1.97
PGK1-205ENST00000491291 KRTAP6-1Q3LI64 71 aa2.7□□□□□ -1.98
PGK1-205ENST00000491291 KRTAP12-4P60329 112 aa2.68□□□□□ -1.98
PGK1-205ENST00000491291 KRTAP5-11Q6L8G4 156 aa2.63□□□□□ -1.99
PGK1-205ENST00000491291 KRTAP20-2Q3LI61 65 aa2.61□□□□□ -1.99
PGK1-205ENST00000491291 KRTAP5-1Q6L8H4 278 aa2.59□□□□□ -1.99
PGK1-205ENST00000491291 SYNE1Q8NF91 8797 aaKnown RBP2.57□□□□□ -2
PGK1-205ENST00000491291 KRTAP4-4Q9BYR3 166 aa2.56□□□□□ -2
PGK1-205ENST00000491291 HMCN1Q96RW7 5635 aa2.53□□□□□ -2
PGK1-205ENST00000491291 KRTAP6-2Q3LI66 62 aa2.52□□□□□ -2.01
PGK1-205ENST00000491291 NDUFAF8A1L188 74 aa2.5□□□□□ -2.01
PGK1-205ENST00000491291 MT3P25713 68 aa2.49□□□□□ -2.01
PGK1-205ENST00000491291 KRTAP5-2Q701N4 177 aa2.49□□□□□ -2.01
PGK1-205ENST00000491291 GPR98Q8WXG9 6306 aa2.42□□□□□ -2.02
PGK1-205ENST00000491291 LCE1EQ5T753 118 aa2.42□□□□□ -2.02
PGK1-205ENST00000491291 AHNAK2Q8IVF2 5795 aa2.36□□□□□ -2.03
PGK1-205ENST00000491291 KRTAP5-10Q6L8G5 202 aa2.33□□□□□ -2.04
PGK1-205ENST00000491291 LCE3DQ9BYE3 92 aa2.28□□□□□ -2.04
PGK1-205ENST00000491291 OBSCNQ5VST9 7968 aa2.27□□□□□ -2.05
PGK1-205ENST00000491291 KRTAP5-8O75690 187 aa2.21□□□□□ -2.06
PGK1-205ENST00000491291 INE1O15225 51 aa2.2□□□□□ -2.06
PGK1-205ENST00000491291 LCE3EQ5T5B0 92 aa2.2□□□□□ -2.06
PGK1-205ENST00000491291 KRTAP5-7Q6L8G8 165 aa2.2□□□□□ -2.06
PGK1-205ENST00000491291 LCE1FQ5T754 118 aa2.19□□□□□ -2.06
PGK1-205ENST00000491291 LCE1BQ5T7P3 118 aa2.07□□□□□ -2.08
PGK1-205ENST00000491291 LCE1CQ5T751 118 aa2.03□□□□□ -2.08
PGK1-205ENST00000491291 MUC5ACP98088 5654 aa2□□□□□ -2.09
PGK1-205ENST00000491291 MUC5BQ9HC84 5762 aaPredicted RBP1.89□□□□□ -2.11
PGK1-205ENST00000491291 AHNAKQ09666 5890 aaKnown RBP1.88□□□□□ -2.11
PGK1-205ENST00000491291 PRM1P04553 51 aa1.84□□□□□ -2.11
PGK1-205ENST00000491291 KRTAP21-2Q3LI59 83 aa1.76□□□□□ -2.13
PGK1-205ENST00000491291 PHGR1C9JFL3 82 aa1.56□□□□□ -2.16
PGK1-205ENST00000491291 MUC19Q7Z5P9 8384 aa1.31□□□□□ -2.2
PGK1-205ENST00000491291 KRTAP21-1Q3LI58 79 aa1.08□□□□□ -2.24
PGK1-205ENST00000491291 MUC16Q8WXI7 14507 aa0.97□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 177.2 ms