RNA–Protein interactions for RNA: ENST00000490814.6

BRD9-209, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,477 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-209ENST00000490814 LCE3CQ5T5A8 94 aa3.69□□□□□ -1.82
BRD9-209ENST00000490814 KRTAP19-6Q3LI70 58 aa3.65□□□□□ -1.83
BRD9-209ENST00000490814 KRTAP4-7Q9BYR0 210 aa3.61□□□□□ -1.83
BRD9-209ENST00000490814 SYNE1Q8NF91 8797 aaKnown RBP3.6□□□□□ -1.83
BRD9-209ENST00000490814 SPRR2FQ96RM1 72 aa3.59□□□□□ -1.83
BRD9-209ENST00000490814 KRTAP9-6A8MVA2 160 aa3.58□□□□□ -1.84
BRD9-209ENST00000490814 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.57□□□□□ -1.84
BRD9-209ENST00000490814 KRTAP2-3P0C7H8 128 aa3.55□□□□□ -1.84
BRD9-209ENST00000490814 KRTAP2-4Q9BYR9 128 aa3.55□□□□□ -1.84
BRD9-209ENST00000490814 KRTAP2-1Q9BYU5 128 aa3.55□□□□□ -1.84
BRD9-209ENST00000490814 MDN1Q9NU22 5596 aa3.53□□□□□ -1.84
BRD9-209ENST00000490814 KRTAP9-7A8MTY7 169 aa3.52□□□□□ -1.85
BRD9-209ENST00000490814 KRTAP19-7Q3SYF9 63 aa3.48□□□□□ -1.85
BRD9-209ENST00000490814 MT1LQ93083 61 aa3.41□□□□□ -1.86
BRD9-209ENST00000490814 MT1EP04732 61 aa3.38□□□□□ -1.87
BRD9-209ENST00000490814 SPRR2EP22531 72 aa3.37□□□□□ -1.87
BRD9-209ENST00000490814 SPRR2BP35325 72 aa3.37□□□□□ -1.87
BRD9-209ENST00000490814 SPRR2AP35326 72 aa3.37□□□□□ -1.87
BRD9-209ENST00000490814 KRTAP12-4P60329 112 aa3.36□□□□□ -1.87
BRD9-209ENST00000490814 LOC100996750A0A140TA64 210 aa3.35□□□□□ -1.87
BRD9-209ENST00000490814 KRTAP4-3Q9BYR4 195 aa3.35□□□□□ -1.87
BRD9-209ENST00000490814 MT1GP13640 62 aa3.32□□□□□ -1.88
BRD9-209ENST00000490814 KRTAP6-3Q3LI67 103 aa3.31□□□□□ -1.88
BRD9-209ENST00000490814 KRTAP2-2Q9BYT5 123 aa3.24□□□□□ -1.89
BRD9-209ENST00000490814 SPRR2DP22532 72 aa3.23□□□□□ -1.89
BRD9-209ENST00000490814 KRTAP19-4Q3LI73 84 aa3.22□□□□□ -1.89
BRD9-209ENST00000490814 LCE1AQ5T7P2 110 aa3.21□□□□□ -1.9
BRD9-209ENST00000490814 NEBP20929 6669 aa3.19□□□□□ -1.9
BRD9-209ENST00000490814 KRTAP5-9P26371 169 aa3.18□□□□□ -1.9
BRD9-209ENST00000490814 MT1MQ8N339 61 aa3.17□□□□□ -1.9
BRD9-209ENST00000490814 KRTAP19-3Q7Z4W3 81 aa3.16□□□□□ -1.9
BRD9-209ENST00000490814 LCE3BQ5TA77 95 aa3.15□□□□□ -1.91
BRD9-209ENST00000490814 KRTAP4-9Q9BYQ8 210 aa3.1□□□□□ -1.91
BRD9-209ENST00000490814 KRTAP20-1Q3LI63 56 aa3.08□□□□□ -1.92
BRD9-209ENST00000490814 PRM1P04553 51 aa3.06□□□□□ -1.92
BRD9-209ENST00000490814 LCE5AQ5TCM9 118 aa3.05□□□□□ -1.92
BRD9-209ENST00000490814 MT4P47944 62 aa3.05□□□□□ -1.92
BRD9-209ENST00000490814 LCE1EQ5T753 118 aa3.02□□□□□ -1.93
BRD9-209ENST00000490814 LCE3DQ9BYE3 92 aa2.94□□□□□ -1.94
BRD9-209ENST00000490814 KRTAP6-1Q3LI64 71 aa2.94□□□□□ -1.94
BRD9-209ENST00000490814 LCE3EQ5T5B0 92 aa2.91□□□□□ -1.94
BRD9-209ENST00000490814 KRTAP5-5Q701N2 237 aaPredicted RBP2.9□□□□□ -1.95
BRD9-209ENST00000490814 LCE1DQ5T752 114 aa2.89□□□□□ -1.95
BRD9-209ENST00000490814 MUC19Q7Z5P9 8384 aa2.87□□□□□ -1.95
BRD9-209ENST00000490814 MT1AP04731 61 aa2.84□□□□□ -1.95
BRD9-209ENST00000490814 KRTAP4-6Q9BYQ5 205 aa2.77□□□□□ -1.97
BRD9-209ENST00000490814 KRTAP9-4Q9BYQ2 154 aa2.76□□□□□ -1.97
BRD9-209ENST00000490814 KRTAP6-2Q3LI66 62 aa2.74□□□□□ -1.97
BRD9-209ENST00000490814 HMCN1Q96RW7 5635 aa2.74□□□□□ -1.97
BRD9-209ENST00000490814 LCE4AQ5TA78 99 aa2.7□□□□□ -1.98
BRD9-209ENST00000490814 GPR98Q8WXG9 6306 aa2.67□□□□□ -1.98
BRD9-209ENST00000490814 LCE1FQ5T754 118 aa2.67□□□□□ -1.98
BRD9-209ENST00000490814 KRTAP9-9Q9BYP9 154 aa2.62□□□□□ -1.99
BRD9-209ENST00000490814 MT3P25713 68 aa2.59□□□□□ -1.99
BRD9-209ENST00000490814 KRTAP20-2Q3LI61 65 aa2.56□□□□□ -2
BRD9-209ENST00000490814 KRTAP5-4Q6L8H1 288 aa2.56□□□□□ -2
BRD9-209ENST00000490814 MUC5ACP98088 5654 aa2.5□□□□□ -2.01
BRD9-209ENST00000490814 LCE1BQ5T7P3 118 aa2.45□□□□□ -2.02
BRD9-209ENST00000490814 AHNAK2Q8IVF2 5795 aa2.4□□□□□ -2.02
BRD9-209ENST00000490814 KRTAP5-3Q6L8H2 238 aa2.39□□□□□ -2.03
BRD9-209ENST00000490814 KRTAP4-12Q9BQ66 201 aa2.34□□□□□ -2.04
BRD9-209ENST00000490814 KRTAP4-11Q9BYQ6 195 aa2.32□□□□□ -2.04
BRD9-209ENST00000490814 MUC5BQ9HC84 5762 aaPredicted RBP2.3□□□□□ -2.04
BRD9-209ENST00000490814 KRTAP5-2Q701N4 177 aa2.26□□□□□ -2.05
BRD9-209ENST00000490814 KRTAP5-10Q6L8G5 202 aa2.25□□□□□ -2.05
BRD9-209ENST00000490814 KRTAP5-8O75690 187 aa2.19□□□□□ -2.06
BRD9-209ENST00000490814 KRTAP4-2Q9BYR5 136 aa2.13□□□□□ -2.07
BRD9-209ENST00000490814 KRTAP5-1Q6L8H4 278 aa2.07□□□□□ -2.08
BRD9-209ENST00000490814 KRTAP5-7Q6L8G8 165 aa2.05□□□□□ -2.08
BRD9-209ENST00000490814 LCE1CQ5T751 118 aa2.02□□□□□ -2.09
BRD9-209ENST00000490814 KRTAP4-4Q9BYR3 166 aa1.99□□□□□ -2.09
BRD9-209ENST00000490814 AHNAKQ09666 5890 aaKnown RBP1.96□□□□□ -2.1
BRD9-209ENST00000490814 KRTAP21-1Q3LI58 79 aa1.94□□□□□ -2.1
BRD9-209ENST00000490814 KRTAP21-2Q3LI59 83 aa1.82□□□□□ -2.12
BRD9-209ENST00000490814 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.7□□□□□ -2.14
BRD9-209ENST00000490814 KRTAP5-11Q6L8G4 156 aa1.66□□□□□ -2.14
BRD9-209ENST00000490814 PHGR1C9JFL3 82 aa1.52□□□□□ -2.17
BRD9-209ENST00000490814 MUC16Q8WXI7 14507 aa0.98□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 15.5 ms