RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 ATOX1O00244 68 aa2.12□□□□□ -2.07
PDLIM1-203ENST00000490391 KRTAP6-1Q3LI64 71 aa2.11□□□□□ -2.07
PDLIM1-203ENST00000490391 TSTD3H0UI37 97 aa2.1□□□□□ -2.07
PDLIM1-203ENST00000490391 S100A1P23297 94 aa2.1□□□□□ -2.07
PDLIM1-203ENST00000490391 KRTAP6-2Q3LI66 62 aa2.1□□□□□ -2.07
PDLIM1-203ENST00000490391 DMAC1Q96GE9 116 aa2.09□□□□□ -2.07
PDLIM1-203ENST00000490391 UQCRQO14949 82 aa2.08□□□□□ -2.08
PDLIM1-203ENST00000490391 MT1AP04731 61 aa2.07□□□□□ -2.08
PDLIM1-203ENST00000490391 KRTAP21-2Q3LI59 83 aa2.07□□□□□ -2.08
PDLIM1-203ENST00000490391 UQCR10Q9UDW1 63 aa2.07□□□□□ -2.08
PDLIM1-203ENST00000490391 KRTAP12-3P60328 96 aa2.05□□□□□ -2.08
PDLIM1-203ENST00000490391 LINC00208Q96KT6 92 aa2.05□□□□□ -2.08
PDLIM1-203ENST00000490391 TAX1BP3O14907 124 aa2.03□□□□□ -2.08
PDLIM1-203ENST00000490391 SMIM26A0A096LP01 95 aa2.02□□□□□ -2.09
PDLIM1-203ENST00000490391 PYY3Q5JQD4 70 aa2.02□□□□□ -2.09
PDLIM1-203ENST00000490391 TRAV7A0A075B6U4 112 aa2□□□□□ -2.09
PDLIM1-203ENST00000490391 LCE3DQ9BYE3 92 aa2□□□□□ -2.09
PDLIM1-203ENST00000490391 M0R143 59 aa1.97□□□□□ -2.09
PDLIM1-203ENST00000490391 KRTAP12-1P59990 96 aa1.95□□□□□ -2.1
PDLIM1-203ENST00000490391 SPINT4Q6UDR6 99 aa1.95□□□□□ -2.1
PDLIM1-203ENST00000490391 TNP1P09430 55 aa1.94□□□□□ -2.1
PDLIM1-203ENST00000490391 MP68P56378 58 aa1.93□□□□□ -2.1
PDLIM1-203ENST00000490391 SPTSSBQ8NFR3 76 aa1.93□□□□□ -2.1
PDLIM1-203ENST00000490391 ACYP2P14621 99 aa1.89□□□□□ -2.11
PDLIM1-203ENST00000490391 HIST1H4AP62805 103 aaKnown RBP1.87□□□□□ -2.11
PDLIM1-203ENST00000490391 LUZP6Q538Z0 58 aa1.87□□□□□ -2.11
PDLIM1-203ENST00000490391 SPATA8Q6RVD6 105 aa1.87□□□□□ -2.11
PDLIM1-203ENST00000490391 PSPHP1O15172 72 aa1.86□□□□□ -2.11
PDLIM1-203ENST00000490391 H3BPC8 53 aa1.85□□□□□ -2.11
PDLIM1-203ENST00000490391 V9GYY9 64 aa1.85□□□□□ -2.11
PDLIM1-203ENST00000490391 SPANXA2-OT1Q8N9U9 137 aa1.84□□□□□ -2.11
PDLIM1-203ENST00000490391 FAM240AA0A1B0GVK7 77 aa1.83□□□□□ -2.12
PDLIM1-203ENST00000490391 CHKB-CPT1BH3BT56 60 aa1.83□□□□□ -2.12
PDLIM1-203ENST00000490391 ATP5EP2Q5VTU8 51 aa1.82□□□□□ -2.12
PDLIM1-203ENST00000490391 KRTAP25-1Q3LHN0 102 aa1.81□□□□□ -2.12
PDLIM1-203ENST00000490391 PRO0628Q9UI54 55 aa1.79□□□□□ -2.12
PDLIM1-203ENST00000490391 PHGR1C9JFL3 82 aa1.77□□□□□ -2.13
PDLIM1-203ENST00000490391 ETDBQ3ZM63 59 aa1.75□□□□□ -2.13
PDLIM1-203ENST00000490391 A0A1B0GU33 70 aa1.74□□□□□ -2.13
PDLIM1-203ENST00000490391 ANAPC13Q9BS18 74 aa1.74□□□□□ -2.13
PDLIM1-203ENST00000490391 SCGB1A1P11684 91 aa1.73□□□□□ -2.13
PDLIM1-203ENST00000490391 K7ERS5 55 aa1.7□□□□□ -2.14
PDLIM1-203ENST00000490391 SERP1Q9Y6X1 66 aa1.68□□□□□ -2.14
PDLIM1-203ENST00000490391 A6NED7 52 aa1.66□□□□□ -2.14
PDLIM1-203ENST00000490391 F8W1H4 67 aa1.66□□□□□ -2.14
PDLIM1-203ENST00000490391 LINC00643Q86TS7 51 aa1.65□□□□□ -2.15
PDLIM1-203ENST00000490391 SMIM6P0DI80 62 aa1.58□□□□□ -2.16
PDLIM1-203ENST00000490391 GTF2H5Q6ZYL4 71 aa1.58□□□□□ -2.16
PDLIM1-203ENST00000490391 COA5Q86WW8 74 aa1.57□□□□□ -2.16
PDLIM1-203ENST00000490391 COL5A1-AS1Q5SY13 56 aa1.55□□□□□ -2.16
PDLIM1-203ENST00000490391 SNURFQ9Y675 71 aa1.53□□□□□ -2.16
PDLIM1-203ENST00000490391 SERP2Q8N6R1 65 aa1.52□□□□□ -2.17
PDLIM1-203ENST00000490391 H7BZZ5 65 aa1.47□□□□□ -2.17
PDLIM1-203ENST00000490391 A0A1B0GU69 56 aa1.46□□□□□ -2.18
PDLIM1-203ENST00000490391 SMIM20Q8N5G0 67 aa1.44□□□□□ -2.18
PDLIM1-203ENST00000490391 PRR15LQ9BU68 103 aa1.4□□□□□ -2.19
PDLIM1-203ENST00000490391 KRTAP21-1Q3LI58 79 aa1.35□□□□□ -2.19
PDLIM1-203ENST00000490391 TMEM258P61165 79 aa1.3□□□□□ -2.2
PDLIM1-203ENST00000490391 RPS28P62857 69 aaKnown RBP1.27□□□□□ -2.21
PDLIM1-203ENST00000490391 KTN1-AS1Q86SY8 53 aa1.26□□□□□ -2.21
PDLIM1-203ENST00000490391 LOC105371267A0A1B0GV96 52 aa1.25□□□□□ -2.21
PDLIM1-203ENST00000490391 PMAIP1Q13794 54 aa1.23□□□□□ -2.21
PDLIM1-203ENST00000490391 UQCR11O14957 56 aa1.22□□□□□ -2.21
PDLIM1-203ENST00000490391 J3QR89 54 aa1.2□□□□□ -2.22
PDLIM1-203ENST00000490391 LINC01558Q9Y6Z2 57 aa1.18□□□□□ -2.22
PDLIM1-203ENST00000490391 MIR22HGQ0VDD5 57 aa1.15□□□□□ -2.23
PDLIM1-203ENST00000490391 Q1T7F1 81 aa1.14□□□□□ -2.23
PDLIM1-203ENST00000490391 A0A1B0GV90 55 aa1.08□□□□□ -2.24
PDLIM1-203ENST00000490391 CDC42SE1Q9NRR8 79 aa1.08□□□□□ -2.24
PDLIM1-203ENST00000490391 COX7CP15954 63 aa1.06□□□□□ -2.24
PDLIM1-203ENST00000490391 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
PDLIM1-203ENST00000490391 ROMO1P60602 79 aa1.05□□□□□ -2.24
PDLIM1-203ENST00000490391 K7ERU9 68 aa0.94□□□□□ -2.26
PDLIM1-203ENST00000490391 ATP5EP56381 51 aaPredicted RBP0.89□□□□□ -2.27
PDLIM1-203ENST00000490391 INE1O15225 51 aa0.86□□□□□ -2.27
PDLIM1-203ENST00000490391 CCDC179H3BU77 68 aa0.78□□□□□ -2.28
PDLIM1-203ENST00000490391 BRK1Q8WUW1 75 aa0.62□□□□□ -2.31
PDLIM1-203ENST00000490391 PRM1P04553 51 aa0.52□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 77.3 ms