RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 UBL5Q9BZL1 73 aa4.75□□□□□ -1.65
UFD1-209ENST00000489406 C10orf95Q9H7T3 257 aa4.75□□□□□ -1.65
UFD1-209ENST00000489406 PRO0628Q9UI54 55 aa4.75□□□□□ -1.65
UFD1-209ENST00000489406 H0Y9P7 68 aa4.71□□□□□ -1.66
UFD1-209ENST00000489406 UQCRQO14949 82 aa4.68□□□□□ -1.66
UFD1-209ENST00000489406 ATOX1O00244 68 aa4.67□□□□□ -1.66
UFD1-209ENST00000489406 H3BT86 120 aa4.66□□□□□ -1.66
UFD1-209ENST00000489406 CCDC179H3BU77 68 aa4.66□□□□□ -1.66
UFD1-209ENST00000489406 PSPHP1O15172 72 aa4.64□□□□□ -1.67
UFD1-209ENST00000489406 TMEM258P61165 79 aa4.63□□□□□ -1.67
UFD1-209ENST00000489406 LCE3AQ5TA76 89 aa4.62□□□□□ -1.67
UFD1-209ENST00000489406 KRTAP13-4Q3LI77 160 aa4.61□□□□□ -1.67
UFD1-209ENST00000489406 LINC00643Q86TS7 51 aa4.61□□□□□ -1.67
UFD1-209ENST00000489406 SMIM26A0A096LP01 95 aa4.6□□□□□ -1.67
UFD1-209ENST00000489406 COX7CP15954 63 aa4.59□□□□□ -1.67
UFD1-209ENST00000489406 PMAIP1Q13794 54 aa4.58□□□□□ -1.68
UFD1-209ENST00000489406 LINC00208Q96KT6 92 aa4.55□□□□□ -1.68
UFD1-209ENST00000489406 HIST1H4AP62805 103 aaKnown RBP4.54□□□□□ -1.68
UFD1-209ENST00000489406 KRTAP5-1Q6L8H4 278 aa4.52□□□□□ -1.69
UFD1-209ENST00000489406 DMAC1Q96GE9 116 aa4.52□□□□□ -1.69
UFD1-209ENST00000489406 SERP2Q8N6R1 65 aa4.51□□□□□ -1.69
UFD1-209ENST00000489406 ATP5EP2Q5VTU8 51 aa4.49□□□□□ -1.69
UFD1-209ENST00000489406 MP68P56378 58 aa4.48□□□□□ -1.69
UFD1-209ENST00000489406 ATP5EP56381 51 aaPredicted RBP4.48□□□□□ -1.69
UFD1-209ENST00000489406 SERP1Q9Y6X1 66 aa4.48□□□□□ -1.69
UFD1-209ENST00000489406 KRTAP6-1Q3LI64 71 aa4.46□□□□□ -1.7
UFD1-209ENST00000489406 KRTAP6-2Q3LI66 62 aa4.46□□□□□ -1.7
UFD1-209ENST00000489406 KRTAP12-3P60328 96 aa4.41□□□□□ -1.7
UFD1-209ENST00000489406 MT1AP04731 61 aa4.39□□□□□ -1.71
UFD1-209ENST00000489406 TRAV7A0A075B6U4 112 aa4.38□□□□□ -1.71
UFD1-209ENST00000489406 SPINT4Q6UDR6 99 aa4.37□□□□□ -1.71
UFD1-209ENST00000489406 SPTSSBQ8NFR3 76 aa4.36□□□□□ -1.71
UFD1-209ENST00000489406 H7BZZ5 65 aa4.32□□□□□ -1.72
UFD1-209ENST00000489406 MT3P25713 68 aa4.29□□□□□ -1.72
UFD1-209ENST00000489406 TNP1P09430 55 aa4.28□□□□□ -1.72
UFD1-209ENST00000489406 KRTAP5-11Q6L8G4 156 aa4.28□□□□□ -1.72
UFD1-209ENST00000489406 BRK1Q8WUW1 75 aa4.27□□□□□ -1.73
UFD1-209ENST00000489406 ACYP2P14621 99 aa4.23□□□□□ -1.73
UFD1-209ENST00000489406 NDUFAF8A1L188 74 aa4.22□□□□□ -1.73
UFD1-209ENST00000489406 Q1T7F1 81 aa4.22□□□□□ -1.73
UFD1-209ENST00000489406 LUZP6Q538Z0 58 aa4.22□□□□□ -1.73
UFD1-209ENST00000489406 KRTAP12-1P59990 96 aa4.21□□□□□ -1.74
UFD1-209ENST00000489406 KTN1-AS1Q86SY8 53 aa4.2□□□□□ -1.74
UFD1-209ENST00000489406 LCE1EQ5T753 118 aa4.19□□□□□ -1.74
UFD1-209ENST00000489406 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.19□□□□□ -1.74
UFD1-209ENST00000489406 CHKB-CPT1BH3BT56 60 aa4.16□□□□□ -1.74
UFD1-209ENST00000489406 SPATA8Q6RVD6 105 aa4.15□□□□□ -1.75
UFD1-209ENST00000489406 K7ERS5 55 aa4.13□□□□□ -1.75
UFD1-209ENST00000489406 SNURFQ9Y675 71 aa4.12□□□□□ -1.75
UFD1-209ENST00000489406 H3BPC8 53 aa4.09□□□□□ -1.75
UFD1-209ENST00000489406 SPANXA2-OT1Q8N9U9 137 aa4.06□□□□□ -1.76
UFD1-209ENST00000489406 A6NED7 52 aa4.03□□□□□ -1.76
UFD1-209ENST00000489406 CDC42SE1Q9NRR8 79 aa4□□□□□ -1.77
UFD1-209ENST00000489406 KRTAP25-1Q3LHN0 102 aa3.98□□□□□ -1.77
UFD1-209ENST00000489406 LCE3CQ5T5A8 94 aa3.96□□□□□ -1.78
UFD1-209ENST00000489406 LCE1FQ5T754 118 aa3.92□□□□□ -1.78
UFD1-209ENST00000489406 LINC01558Q9Y6Z2 57 aa3.91□□□□□ -1.78
UFD1-209ENST00000489406 PRR15LQ9BU68 103 aa3.9□□□□□ -1.79
UFD1-209ENST00000489406 A0A1B0GU33 70 aa3.87□□□□□ -1.79
UFD1-209ENST00000489406 LCE1BQ5T7P3 118 aa3.87□□□□□ -1.79
UFD1-209ENST00000489406 COA5Q86WW8 74 aa3.82□□□□□ -1.8
UFD1-209ENST00000489406 A8MU10 97 aa3.8□□□□□ -1.8
UFD1-209ENST00000489406 KRTAP9-6A8MVA2 160 aa3.8□□□□□ -1.8
UFD1-209ENST00000489406 PHGR1C9JFL3 82 aa3.77□□□□□ -1.81
UFD1-209ENST00000489406 ROMO1P60602 79 aa3.69□□□□□ -1.82
UFD1-209ENST00000489406 UQCR11O14957 56 aa3.68□□□□□ -1.82
UFD1-209ENST00000489406 LCE1CQ5T751 118 aa3.66□□□□□ -1.82
UFD1-209ENST00000489406 A0A1B0GU69 56 aa3.64□□□□□ -1.83
UFD1-209ENST00000489406 MIR22HGQ0VDD5 57 aa3.64□□□□□ -1.83
UFD1-209ENST00000489406 KRTAP4-4Q9BYR3 166 aa3.5□□□□□ -1.85
UFD1-209ENST00000489406 LCE3EQ5T5B0 92 aa3.37□□□□□ -1.87
UFD1-209ENST00000489406 INE1O15225 51 aa3.09□□□□□ -1.91
UFD1-209ENST00000489406 MUC19Q7Z5P9 8384 aa3.05□□□□□ -1.92
UFD1-209ENST00000489406 KRTAP21-2Q3LI59 83 aa2.94□□□□□ -1.94
UFD1-209ENST00000489406 KRTAP21-1Q3LI58 79 aa2.85□□□□□ -1.95
UFD1-209ENST00000489406 LCE3DQ9BYE3 92 aa2.7□□□□□ -1.98
UFD1-209ENST00000489406 MUC16Q8WXI7 14507 aa2.06□□□□□ -2.08
UFD1-209ENST00000489406 PRM1P04553 51 aa1.71□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 65.8 ms