RNA–Protein interactions for RNA: ENST00000489019.6

CALD1-221, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-221ENST00000489019 PRO2289Q9P1D8 64 aa1.29□□□□□ -2.2
CALD1-221ENST00000489019 LPAP08519 4548 aa1.28□□□□□ -2.2
CALD1-221ENST00000489019 MYCBP2O75592 4640 aa1.28□□□□□ -2.2
CALD1-221ENST00000489019 M0R2T5 61 aa1.28□□□□□ -2.2
CALD1-221ENST00000489019 C10orf95Q9H7T3 257 aa1.27□□□□□ -2.21
CALD1-221ENST00000489019 HERC2O95714 4834 aa1.27□□□□□ -2.21
CALD1-221ENST00000489019 MUC17Q685J3 4493 aa1.27□□□□□ -2.21
CALD1-221ENST00000489019 KRTAP19-2Q3LHN2 52 aa1.26□□□□□ -2.21
CALD1-221ENST00000489019 LRP2P98164 4655 aa1.25□□□□□ -2.21
CALD1-221ENST00000489019 PLAC4Q8WY50 150 aa1.24□□□□□ -2.21
CALD1-221ENST00000489019 PCLOQ9Y6V0 5065 aa1.23□□□□□ -2.21
CALD1-221ENST00000489019 HERC1Q15751 4861 aa1.22□□□□□ -2.21
CALD1-221ENST00000489019 MT1HP80294 61 aa1.22□□□□□ -2.21
CALD1-221ENST00000489019 TNP1P09430 55 aa1.21□□□□□ -2.22
CALD1-221ENST00000489019 MT2AP02795 61 aa1.19□□□□□ -2.22
CALD1-221ENST00000489019 HMCN2Q8NDA2 5059 aa1.19□□□□□ -2.22
CALD1-221ENST00000489019 MT1FP04733 61 aa1.18□□□□□ -2.22
CALD1-221ENST00000489019 KRTAP21-2Q3LI59 83 aa1.18□□□□□ -2.22
CALD1-221ENST00000489019 SPRR2GQ9BYE4 73 aa1.18□□□□□ -2.22
CALD1-221ENST00000489019 RNF213Q63HN8 5207 aa1.17□□□□□ -2.22
CALD1-221ENST00000489019 FLGP20930 4061 aaPredicted RBP1.16□□□□□ -2.22
CALD1-221ENST00000489019 KRTAP12-4P60329 112 aa1.16□□□□□ -2.22
CALD1-221ENST00000489019 MUC2Q02817 5179 aa1.15□□□□□ -2.23
CALD1-221ENST00000489019 KRTAP12-3P60328 96 aa1.14□□□□□ -2.23
CALD1-221ENST00000489019 KRTAP19-8Q3LI54 63 aa1.14□□□□□ -2.23
CALD1-221ENST00000489019 UBR4Q5T4S7 5183 aa1.13□□□□□ -2.23
CALD1-221ENST00000489019 MT1BP07438 61 aa1.12□□□□□ -2.23
CALD1-221ENST00000489019 KRTAP6-3Q3LI67 103 aa1.11□□□□□ -2.23
CALD1-221ENST00000489019 FAT4Q6V0I7 4981 aa1.11□□□□□ -2.23
CALD1-221ENST00000489019 MT1XP80297 61 aa1.1□□□□□ -2.23
CALD1-221ENST00000489019 KRTAP8-1Q8IUC2 63 aa1.07□□□□□ -2.24
CALD1-221ENST00000489019 INE1O15225 51 aa1.06□□□□□ -2.24
CALD1-221ENST00000489019 KRTAP19-5Q3LI72 72 aa1.04□□□□□ -2.24
CALD1-221ENST00000489019 CRCT1Q9UGL9 99 aa1.02□□□□□ -2.25
CALD1-221ENST00000489019 KRTAP19-6Q3LI70 58 aa1□□□□□ -2.25
CALD1-221ENST00000489019 USH2AO75445 5202 aa0.99□□□□□ -2.25
CALD1-221ENST00000489019 KRTAP19-7Q3SYF9 63 aa0.98□□□□□ -2.25
CALD1-221ENST00000489019 MT1EP04732 61 aa0.97□□□□□ -2.25
CALD1-221ENST00000489019 MT1LQ93083 61 aa0.96□□□□□ -2.26
CALD1-221ENST00000489019 SSPOA2VEC9 5147 aa0.95□□□□□ -2.26
CALD1-221ENST00000489019 KMT2DO14686 5537 aa0.93□□□□□ -2.26
CALD1-221ENST00000489019 KRTAP19-3Q7Z4W3 81 aa0.93□□□□□ -2.26
CALD1-221ENST00000489019 SPRR2FQ96RM1 72 aa0.93□□□□□ -2.26
CALD1-221ENST00000489019 MT1GP13640 62 aa0.92□□□□□ -2.26
CALD1-221ENST00000489019 MT1MQ8N339 61 aa0.91□□□□□ -2.26
CALD1-221ENST00000489019 FSIP2Q5CZC0 6907 aa0.89□□□□□ -2.27
CALD1-221ENST00000489019 KRTAP2-3P0C7H8 128 aa0.88□□□□□ -2.27
CALD1-221ENST00000489019 SPRR2EP22531 72 aa0.88□□□□□ -2.27
CALD1-221ENST00000489019 SPRR2BP35325 72 aa0.88□□□□□ -2.27
CALD1-221ENST00000489019 SPRR2AP35326 72 aa0.88□□□□□ -2.27
CALD1-221ENST00000489019 KRTAP2-4Q9BYR9 128 aa0.88□□□□□ -2.27
CALD1-221ENST00000489019 KRTAP2-1Q9BYU5 128 aa0.88□□□□□ -2.27
CALD1-221ENST00000489019 FCGBPQ9Y6R7 5405 aaPredicted RBP0.87□□□□□ -2.27
CALD1-221ENST00000489019 SPRR2DP22532 72 aa0.84□□□□□ -2.27
CALD1-221ENST00000489019 MT1AP04731 61 aa0.83□□□□□ -2.28
CALD1-221ENST00000489019 KRTAP6-1Q3LI64 71 aa0.82□□□□□ -2.28
CALD1-221ENST00000489019 MUC12Q9UKN1 5478 aa0.82□□□□□ -2.28
CALD1-221ENST00000489019 MACF1Q9UPN3 7388 aaKnown RBP0.81□□□□□ -2.28
CALD1-221ENST00000489019 SYNE2Q8WXH0 6885 aaKnown RBP0.81□□□□□ -2.28
CALD1-221ENST00000489019 DSTQ03001 7570 aaKnown RBP0.75□□□□□ -2.29
CALD1-221ENST00000489019 MDN1Q9NU22 5596 aa0.75□□□□□ -2.29
CALD1-221ENST00000489019 KRTAP6-2Q3LI66 62 aa0.74□□□□□ -2.29
CALD1-221ENST00000489019 HMCN1Q96RW7 5635 aa0.73□□□□□ -2.29
CALD1-221ENST00000489019 MT4P47944 62 aa0.73□□□□□ -2.29
CALD1-221ENST00000489019 PRM1P04553 51 aa0.71□□□□□ -2.3
CALD1-221ENST00000489019 SYNE1Q8NF91 8797 aaKnown RBP0.71□□□□□ -2.3
CALD1-221ENST00000489019 KRTAP20-1Q3LI63 56 aa0.7□□□□□ -2.3
CALD1-221ENST00000489019 NEBP20929 6669 aa0.69□□□□□ -2.3
CALD1-221ENST00000489019 KRTAP20-2Q3LI61 65 aa0.69□□□□□ -2.3
CALD1-221ENST00000489019 KRTAP5-10Q6L8G5 202 aa0.6□□□□□ -2.31
CALD1-221ENST00000489019 MUC16Q8WXI7 14507 aa0.57□□□□□ -2.32
CALD1-221ENST00000489019 MUC5ACP98088 5654 aa0.54□□□□□ -2.32
CALD1-221ENST00000489019 AHNAK2Q8IVF2 5795 aa0.48□□□□□ -2.33
CALD1-221ENST00000489019 PHGR1C9JFL3 82 aa0.42□□□□□ -2.34
CALD1-221ENST00000489019 KRTAP21-1Q3LI58 79 aa0.42□□□□□ -2.34
CALD1-221ENST00000489019 MUC5BQ9HC84 5762 aaPredicted RBP0.42□□□□□ -2.34
CALD1-221ENST00000489019 GPR98Q8WXG9 6306 aa0.39□□□□□ -2.35
CALD1-221ENST00000489019 AHNAKQ09666 5890 aaKnown RBP0.32□□□□□ -2.36
Retrieved 78 of 20,778 RNA–protein pairs in 77.6 ms