RNA–Protein interactions for RNA: ENST00000488971.1

KDM3A-213, Transcript of lysine demethylase 3A, humanhuman

TSL 3

Gene KDM3A, Length 975 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-213ENST00000488971 KRTAP19-5Q3LI72 72 aa0.63□□□□□ -2.31
KDM3A-213ENST00000488971 CUBNO60494 3623 aa0.63□□□□□ -2.31
KDM3A-213ENST00000488971 HSPG2P98160 4391 aa0.63□□□□□ -2.31
KDM3A-213ENST00000488971 EYSQ5T1H1 3165 aa0.63□□□□□ -2.31
KDM3A-213ENST00000488971 SVEP1Q4LDE5 3571 aa0.62□□□□□ -2.31
KDM3A-213ENST00000488971 MYO18BQ8IUG5 2567 aa0.62□□□□□ -2.31
KDM3A-213ENST00000488971 SPRR2BP35325 72 aa0.62□□□□□ -2.31
KDM3A-213ENST00000488971 KRTAP21-1Q3LI58 79 aa0.62□□□□□ -2.31
KDM3A-213ENST00000488971 MYO15AQ9UKN7 3530 aa0.61□□□□□ -2.31
KDM3A-213ENST00000488971 FLNAP21333 2647 aaKnown RBP0.61□□□□□ -2.31
KDM3A-213ENST00000488971 RYR1P21817 5038 aa0.61□□□□□ -2.31
KDM3A-213ENST00000488971 STARD9Q9P2P6 4700 aa0.61□□□□□ -2.31
KDM3A-213ENST00000488971 CEP295Q9C0D2 2601 aa0.6□□□□□ -2.31
KDM3A-213ENST00000488971 SYNE1Q8NF91 8797 aaKnown RBP0.6□□□□□ -2.31
KDM3A-213ENST00000488971 MUC2Q02817 5179 aa0.6□□□□□ -2.31
KDM3A-213ENST00000488971 PLECQ15149 4684 aaKnown RBP0.59□□□□□ -2.31
KDM3A-213ENST00000488971 MACF1Q9UPN3 7388 aaKnown RBP0.59□□□□□ -2.31
KDM3A-213ENST00000488971 ACACBO00763 2458 aa0.59□□□□□ -2.32
KDM3A-213ENST00000488971 DNAH5Q8TE73 4624 aa0.59□□□□□ -2.32
KDM3A-213ENST00000488971 DYNC1H1Q14204 4646 aaKnown RBP0.58□□□□□ -2.32
KDM3A-213ENST00000488971 PKHD1P08F94 4074 aa0.58□□□□□ -2.32
KDM3A-213ENST00000488971 AHNAKQ09666 5890 aaKnown RBP0.57□□□□□ -2.32
KDM3A-213ENST00000488971 MGAM2Q2M2H8 2515 aa0.57□□□□□ -2.32
KDM3A-213ENST00000488971 MT1AP04731 61 aa0.57□□□□□ -2.32
KDM3A-213ENST00000488971 SPRR2GQ9BYE4 73 aa0.57□□□□□ -2.32
KDM3A-213ENST00000488971 NEBP20929 6669 aa0.57□□□□□ -2.32
KDM3A-213ENST00000488971 VPS13CQ709C8 3753 aa0.57□□□□□ -2.32
KDM3A-213ENST00000488971 SYNE2Q8WXH0 6885 aaKnown RBP0.57□□□□□ -2.32
KDM3A-213ENST00000488971 SPRR2AP35326 72 aa0.54□□□□□ -2.32
KDM3A-213ENST00000488971 KRTAP6-2Q3LI66 62 aa0.54□□□□□ -2.32
KDM3A-213ENST00000488971 IGSF10Q6WRI0 2623 aa0.54□□□□□ -2.32
KDM3A-213ENST00000488971 KMT2CQ8NEZ4 4911 aaKnown RBP0.54□□□□□ -2.32
KDM3A-213ENST00000488971 MUC17Q685J3 4493 aa0.53□□□□□ -2.32
KDM3A-213ENST00000488971 FAT1Q14517 4588 aa0.53□□□□□ -2.33
KDM3A-213ENST00000488971 FSIP2Q5CZC0 6907 aa0.53□□□□□ -2.33
KDM3A-213ENST00000488971 HYDINQ4G0P3 5121 aa0.52□□□□□ -2.33
KDM3A-213ENST00000488971 RYR2Q92736 4967 aa0.52□□□□□ -2.33
KDM3A-213ENST00000488971 MT1XP80297 61 aa0.52□□□□□ -2.33
KDM3A-213ENST00000488971 SPRR2FQ96RM1 72 aa0.52□□□□□ -2.33
KDM3A-213ENST00000488971 ABCA13Q86UQ4 5058 aa0.52□□□□□ -2.33
KDM3A-213ENST00000488971 HERC1Q15751 4861 aa0.52□□□□□ -2.33
KDM3A-213ENST00000488971 DSTQ03001 7570 aaKnown RBP0.51□□□□□ -2.33
KDM3A-213ENST00000488971 MT1EP04732 61 aa0.51□□□□□ -2.33
KDM3A-213ENST00000488971 KRTAP19-2Q3LHN2 52 aa0.51□□□□□ -2.33
KDM3A-213ENST00000488971 KRTAP19-8Q3LI54 63 aa0.51□□□□□ -2.33
KDM3A-213ENST00000488971 LRP1BQ9NZR2 4599 aa0.51□□□□□ -2.33
KDM3A-213ENST00000488971 MT1LQ93083 61 aa0.5□□□□□ -2.33
KDM3A-213ENST00000488971 DNHD1Q96M86 4753 aa0.5□□□□□ -2.33
KDM3A-213ENST00000488971 RYR3Q15413 4870 aa0.49□□□□□ -2.33
KDM3A-213ENST00000488971 BIRC6Q9NR09 4857 aa0.49□□□□□ -2.33
KDM3A-213ENST00000488971 SPRR2EP22531 72 aa0.48□□□□□ -2.33
KDM3A-213ENST00000488971 MUC5BQ9HC84 5762 aaPredicted RBP0.47□□□□□ -2.33
KDM3A-213ENST00000488971 FAT4Q6V0I7 4981 aa0.47□□□□□ -2.33
KDM3A-213ENST00000488971 KMT2DO14686 5537 aa0.47□□□□□ -2.33
KDM3A-213ENST00000488971 MT1BP07438 61 aa0.47□□□□□ -2.33
KDM3A-213ENST00000488971 EPPK1P58107 5090 aaKnown RBP0.47□□□□□ -2.33
KDM3A-213ENST00000488971 HMCN2Q8NDA2 5059 aa0.46□□□□□ -2.34
KDM3A-213ENST00000488971 LRP2P98164 4655 aa0.46□□□□□ -2.34
KDM3A-213ENST00000488971 KRTAP19-7Q3SYF9 63 aa0.46□□□□□ -2.34
KDM3A-213ENST00000488971 MT1HP80294 61 aa0.45□□□□□ -2.34
KDM3A-213ENST00000488971 RNF213Q63HN8 5207 aa0.45□□□□□ -2.34
KDM3A-213ENST00000488971 SSPOA2VEC9 5147 aa0.45□□□□□ -2.34
KDM3A-213ENST00000488971 MT1GP13640 62 aa0.44□□□□□ -2.34
KDM3A-213ENST00000488971 MT1HL1P0DM35 61 aa0.42□□□□□ -2.34
KDM3A-213ENST00000488971 HERC2O95714 4834 aa0.42□□□□□ -2.34
KDM3A-213ENST00000488971 MDN1Q9NU22 5596 aa0.41□□□□□ -2.34
KDM3A-213ENST00000488971 MUC5ACP98088 5654 aa0.41□□□□□ -2.34
KDM3A-213ENST00000488971 PHGR1C9JFL3 82 aa0.41□□□□□ -2.34
KDM3A-213ENST00000488971 MT2AP02795 61 aa0.41□□□□□ -2.34
KDM3A-213ENST00000488971 MT1FP04733 61 aa0.4□□□□□ -2.35
KDM3A-213ENST00000488971 KRTAP20-1Q3LI63 56 aa0.39□□□□□ -2.35
KDM3A-213ENST00000488971 KRTAP6-1Q3LI64 71 aa0.39□□□□□ -2.35
KDM3A-213ENST00000488971 MT1MQ8N339 61 aa0.39□□□□□ -2.35
KDM3A-213ENST00000488971 USH2AO75445 5202 aa0.35□□□□□ -2.35
KDM3A-213ENST00000488971 MUC12Q9UKN1 5478 aa0.32□□□□□ -2.36
KDM3A-213ENST00000488971 KRTAP19-6Q3LI70 58 aa0.18□□□□□ -2.38
KDM3A-213ENST00000488971 MT4P47944 62 aa0.13□□□□□ -2.39
KDM3A-213ENST00000488971 KRTAP20-2Q3LI61 65 aa0.13□□□□□ -2.39
Retrieved 78 of 20,778 RNA–protein pairs in 6.6 ms