RNA–Protein interactions for RNA: ENST00000488934.1

SF3A3-207, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 5

Gene SF3A3, Length 273 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-207ENST00000488934 H7BZZ5 65 aa2.12□□□□□ -2.07
SF3A3-207ENST00000488934 MT1XP80297 61 aa2.12□□□□□ -2.07
SF3A3-207ENST00000488934 LCE3DQ9BYE3 92 aa2.12□□□□□ -2.07
SF3A3-207ENST00000488934 KMT2DO14686 5537 aa2.1□□□□□ -2.07
SF3A3-207ENST00000488934 ATP5EP56381 51 aaPredicted RBP2.1□□□□□ -2.07
SF3A3-207ENST00000488934 A0A1B0GU69 56 aa2.07□□□□□ -2.08
SF3A3-207ENST00000488934 KRTAP2-3P0C7H8 128 aa2.07□□□□□ -2.08
SF3A3-207ENST00000488934 CAMK2N1Q7Z7J9 78 aa2.07□□□□□ -2.08
SF3A3-207ENST00000488934 KRTAP8-1Q8IUC2 63 aa2.07□□□□□ -2.08
SF3A3-207ENST00000488934 KRTAP2-4Q9BYR9 128 aa2.07□□□□□ -2.08
SF3A3-207ENST00000488934 CYSTM1Q9H1C7 97 aa2.07□□□□□ -2.08
SF3A3-207ENST00000488934 A0A1B0GU33 70 aa2.06□□□□□ -2.08
SF3A3-207ENST00000488934 SPRR2FQ96RM1 72 aa2.05□□□□□ -2.08
SF3A3-207ENST00000488934 PRR15LQ9BU68 103 aa2.05□□□□□ -2.08
SF3A3-207ENST00000488934 KRTAP13-4Q3LI77 160 aa2.04□□□□□ -2.08
SF3A3-207ENST00000488934 SMIM26A0A096LP01 95 aa2.03□□□□□ -2.08
SF3A3-207ENST00000488934 CCDC179H3BU77 68 aa2.03□□□□□ -2.08
SF3A3-207ENST00000488934 TMEM258P61165 79 aa2.03□□□□□ -2.08
SF3A3-207ENST00000488934 A0A0D9SG42 100 aa2.02□□□□□ -2.09
SF3A3-207ENST00000488934 SPATA8Q6RVD6 105 aa2.02□□□□□ -2.09
SF3A3-207ENST00000488934 SPRR2EP22531 72 aa2.01□□□□□ -2.09
SF3A3-207ENST00000488934 SPRR2BP35325 72 aa2.01□□□□□ -2.09
SF3A3-207ENST00000488934 SPRR2AP35326 72 aa2.01□□□□□ -2.09
SF3A3-207ENST00000488934 SPINT4Q6UDR6 99 aa2.01□□□□□ -2.09
SF3A3-207ENST00000488934 KRTAP12-1P59990 96 aa1.98□□□□□ -2.09
SF3A3-207ENST00000488934 KRTAP2-1Q9BYU5 128 aa1.98□□□□□ -2.09
SF3A3-207ENST00000488934 LINC01558Q9Y6Z2 57 aa1.98□□□□□ -2.09
SF3A3-207ENST00000488934 UQCR11O14957 56 aa1.96□□□□□ -2.1
SF3A3-207ENST00000488934 SPRR5A0A1B0GTR4 108 aa1.95□□□□□ -2.1
SF3A3-207ENST00000488934 SPRR2DP22532 72 aa1.95□□□□□ -2.1
SF3A3-207ENST00000488934 V9GYY9 64 aa1.94□□□□□ -2.1
SF3A3-207ENST00000488934 TNP1P09430 55 aa1.93□□□□□ -2.1
SF3A3-207ENST00000488934 K7ERS5 55 aa1.92□□□□□ -2.1
SF3A3-207ENST00000488934 MIR22HGQ0VDD5 57 aa1.9□□□□□ -2.11
SF3A3-207ENST00000488934 KRTAP19-7Q3SYF9 63 aa1.89□□□□□ -2.11
SF3A3-207ENST00000488934 DSTQ03001 7570 aaKnown RBP1.88□□□□□ -2.11
SF3A3-207ENST00000488934 MT1EP04732 61 aa1.88□□□□□ -2.11
SF3A3-207ENST00000488934 Q1T7F1 81 aa1.88□□□□□ -2.11
SF3A3-207ENST00000488934 KRTAP19-3Q7Z4W3 81 aa1.88□□□□□ -2.11
SF3A3-207ENST00000488934 C10orf95Q9H7T3 257 aa1.87□□□□□ -2.11
SF3A3-207ENST00000488934 PSPHP1O15172 72 aa1.86□□□□□ -2.11
SF3A3-207ENST00000488934 KRTAP19-5Q3LI72 72 aa1.86□□□□□ -2.11
SF3A3-207ENST00000488934 MT1GP13640 62 aa1.85□□□□□ -2.11
SF3A3-207ENST00000488934 KRTAP25-1Q3LHN0 102 aa1.84□□□□□ -2.11
SF3A3-207ENST00000488934 A6NED7 52 aa1.83□□□□□ -2.12
SF3A3-207ENST00000488934 RPS28P62857 69 aaKnown RBP1.83□□□□□ -2.12
SF3A3-207ENST00000488934 KRTAP5-8O75690 187 aa1.82□□□□□ -2.12
SF3A3-207ENST00000488934 HMCN1Q96RW7 5635 aa1.81□□□□□ -2.12
SF3A3-207ENST00000488934 AHNAK2Q8IVF2 5795 aa1.81□□□□□ -2.12
SF3A3-207ENST00000488934 KRTAP12-3P60328 96 aa1.8□□□□□ -2.12
SF3A3-207ENST00000488934 MT1LQ93083 61 aa1.8□□□□□ -2.12
SF3A3-207ENST00000488934 KRTAP5-7Q6L8G8 165 aa1.79□□□□□ -2.12
SF3A3-207ENST00000488934 MT1MQ8N339 61 aa1.79□□□□□ -2.12
SF3A3-207ENST00000488934 CDC42SE1Q9NRR8 79 aa1.78□□□□□ -2.12
SF3A3-207ENST00000488934 MUC19Q7Z5P9 8384 aa1.78□□□□□ -2.12
SF3A3-207ENST00000488934 ROMO1P60602 79 aa1.73□□□□□ -2.13
SF3A3-207ENST00000488934 MT4P47944 62 aa1.71□□□□□ -2.14
SF3A3-207ENST00000488934 KRTAP5-10Q6L8G5 202 aa1.71□□□□□ -2.14
SF3A3-207ENST00000488934 KRTAP12-4P60329 112 aa1.63□□□□□ -2.15
SF3A3-207ENST00000488934 PRO0628Q9UI54 55 aa1.63□□□□□ -2.15
SF3A3-207ENST00000488934 AHNAKQ09666 5890 aaKnown RBP1.62□□□□□ -2.15
SF3A3-207ENST00000488934 BRK1Q8WUW1 75 aa1.61□□□□□ -2.15
SF3A3-207ENST00000488934 KRTAP20-2Q3LI61 65 aa1.58□□□□□ -2.16
SF3A3-207ENST00000488934 MT1AP04731 61 aa1.55□□□□□ -2.16
SF3A3-207ENST00000488934 PMAIP1Q13794 54 aa1.55□□□□□ -2.16
SF3A3-207ENST00000488934 KRTAP21-2Q3LI59 83 aa1.55□□□□□ -2.16
SF3A3-207ENST00000488934 MUC5BQ9HC84 5762 aaPredicted RBP1.54□□□□□ -2.16
SF3A3-207ENST00000488934 MUC5ACP98088 5654 aa1.53□□□□□ -2.16
SF3A3-207ENST00000488934 KRTAP6-1Q3LI64 71 aa1.51□□□□□ -2.17
SF3A3-207ENST00000488934 SYNE1Q8NF91 8797 aaKnown RBP1.49□□□□□ -2.17
SF3A3-207ENST00000488934 KTN1-AS1Q86SY8 53 aa1.47□□□□□ -2.17
SF3A3-207ENST00000488934 KRTAP6-2Q3LI66 62 aa1.44□□□□□ -2.18
SF3A3-207ENST00000488934 LUZP6Q538Z0 58 aa1.28□□□□□ -2.2
SF3A3-207ENST00000488934 PHGR1C9JFL3 82 aa1.06□□□□□ -2.24
SF3A3-207ENST00000488934 INE1O15225 51 aa1□□□□□ -2.25
SF3A3-207ENST00000488934 PRM1P04553 51 aa0.86□□□□□ -2.27
SF3A3-207ENST00000488934 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
SF3A3-207ENST00000488934 KRTAP21-1Q3LI58 79 aa0.78□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 105.7 ms