RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 H7BZZ5 65 aa2.37□□□□□ -2.03
CDHR3-213ENST00000488386 ATP5EP56381 51 aaPredicted RBP2.36□□□□□ -2.03
CDHR3-213ENST00000488386 CHKB-CPT1BH3BT56 60 aa2.35□□□□□ -2.03
CDHR3-213ENST00000488386 KRTAP2-3P0C7H8 128 aa2.35□□□□□ -2.03
CDHR3-213ENST00000488386 ANAPC13Q9BS18 74 aa2.35□□□□□ -2.03
CDHR3-213ENST00000488386 KRTAP2-4Q9BYR9 128 aa2.35□□□□□ -2.03
CDHR3-213ENST00000488386 KRTAP13-4Q3LI77 160 aa2.34□□□□□ -2.03
CDHR3-213ENST00000488386 SPRR2DP22532 72 aa2.32□□□□□ -2.04
CDHR3-213ENST00000488386 PP632Q6XCG6 107 aa2.32□□□□□ -2.04
CDHR3-213ENST00000488386 LCE1CQ5T751 118 aa2.31□□□□□ -2.04
CDHR3-213ENST00000488386 LCE1BQ5T7P3 118 aa2.31□□□□□ -2.04
CDHR3-213ENST00000488386 COA5Q86WW8 74 aa2.3□□□□□ -2.04
CDHR3-213ENST00000488386 TMEM258P61165 79 aa2.29□□□□□ -2.04
CDHR3-213ENST00000488386 CYSTM1Q9H1C7 97 aa2.29□□□□□ -2.04
CDHR3-213ENST00000488386 SPRR5A0A1B0GTR4 108 aa2.28□□□□□ -2.04
CDHR3-213ENST00000488386 KRTAP2-1Q9BYU5 128 aa2.28□□□□□ -2.04
CDHR3-213ENST00000488386 CCDC179H3BU77 68 aa2.27□□□□□ -2.05
CDHR3-213ENST00000488386 A0A0D9SG42 100 aa2.26□□□□□ -2.05
CDHR3-213ENST00000488386 KRTAP5-2Q701N4 177 aa2.26□□□□□ -2.05
CDHR3-213ENST00000488386 SPATA8Q6RVD6 105 aa2.25□□□□□ -2.05
CDHR3-213ENST00000488386 SPINT4Q6UDR6 99 aa2.22□□□□□ -2.05
CDHR3-213ENST00000488386 SERP1Q9Y6X1 66 aa2.22□□□□□ -2.05
CDHR3-213ENST00000488386 KRTAP19-7Q3SYF9 63 aa2.21□□□□□ -2.06
CDHR3-213ENST00000488386 A0A1B0GU69 56 aa2.19□□□□□ -2.06
CDHR3-213ENST00000488386 MT1EP04732 61 aa2.19□□□□□ -2.06
CDHR3-213ENST00000488386 PRR15LQ9BU68 103 aa2.19□□□□□ -2.06
CDHR3-213ENST00000488386 LINC01558Q9Y6Z2 57 aa2.19□□□□□ -2.06
CDHR3-213ENST00000488386 A0A1B0GU33 70 aa2.18□□□□□ -2.06
CDHR3-213ENST00000488386 KRTAP12-1P59990 96 aa2.18□□□□□ -2.06
CDHR3-213ENST00000488386 KRTAP19-5Q3LI72 72 aa2.17□□□□□ -2.06
CDHR3-213ENST00000488386 KRTAP19-3Q7Z4W3 81 aa2.17□□□□□ -2.06
CDHR3-213ENST00000488386 V9GYY9 64 aa2.17□□□□□ -2.06
CDHR3-213ENST00000488386 DSTQ03001 7570 aaKnown RBP2.17□□□□□ -2.06
CDHR3-213ENST00000488386 SMIM26A0A096LP01 95 aa2.16□□□□□ -2.06
CDHR3-213ENST00000488386 RPS28P62857 69 aaKnown RBP2.14□□□□□ -2.07
CDHR3-213ENST00000488386 Q1T7F1 81 aa2.13□□□□□ -2.07
CDHR3-213ENST00000488386 UQCR11O14957 56 aa2.12□□□□□ -2.07
CDHR3-213ENST00000488386 C10orf95Q9H7T3 257 aa2.11□□□□□ -2.07
CDHR3-213ENST00000488386 MT1MQ8N339 61 aa2.1□□□□□ -2.07
CDHR3-213ENST00000488386 MT1GP13640 62 aa2.09□□□□□ -2.07
CDHR3-213ENST00000488386 MT1LQ93083 61 aa2.09□□□□□ -2.07
CDHR3-213ENST00000488386 MT4P47944 62 aa2.07□□□□□ -2.08
CDHR3-213ENST00000488386 GPR98Q8WXG9 6306 aa2.06□□□□□ -2.08
CDHR3-213ENST00000488386 TNP1P09430 55 aa2.05□□□□□ -2.08
CDHR3-213ENST00000488386 MIR22HGQ0VDD5 57 aa2.04□□□□□ -2.08
CDHR3-213ENST00000488386 K7ERS5 55 aa2.02□□□□□ -2.09
CDHR3-213ENST00000488386 PSPHP1O15172 72 aa2.01□□□□□ -2.09
CDHR3-213ENST00000488386 HMCN1Q96RW7 5635 aa1.99□□□□□ -2.09
CDHR3-213ENST00000488386 KRTAP12-3P60328 96 aa1.99□□□□□ -2.09
CDHR3-213ENST00000488386 LUZP6Q538Z0 58 aa1.99□□□□□ -2.09
CDHR3-213ENST00000488386 A6NED7 52 aa1.98□□□□□ -2.09
CDHR3-213ENST00000488386 KRTAP25-1Q3LHN0 102 aa1.98□□□□□ -2.09
CDHR3-213ENST00000488386 CDC42SE1Q9NRR8 79 aa1.98□□□□□ -2.09
CDHR3-213ENST00000488386 KRTAP5-7Q6L8G8 165 aa1.97□□□□□ -2.09
CDHR3-213ENST00000488386 AHNAK2Q8IVF2 5795 aa1.94□□□□□ -2.1
CDHR3-213ENST00000488386 SYNE1Q8NF91 8797 aaKnown RBP1.93□□□□□ -2.1
CDHR3-213ENST00000488386 KRTAP5-10Q6L8G5 202 aa1.91□□□□□ -2.1
CDHR3-213ENST00000488386 MUC19Q7Z5P9 8384 aa1.89□□□□□ -2.11
CDHR3-213ENST00000488386 KRTAP20-2Q3LI61 65 aa1.89□□□□□ -2.11
CDHR3-213ENST00000488386 PRO0628Q9UI54 55 aa1.89□□□□□ -2.11
CDHR3-213ENST00000488386 ROMO1P60602 79 aa1.88□□□□□ -2.11
CDHR3-213ENST00000488386 KRTAP12-4P60329 112 aa1.83□□□□□ -2.12
CDHR3-213ENST00000488386 PMAIP1Q13794 54 aa1.83□□□□□ -2.12
CDHR3-213ENST00000488386 BRK1Q8WUW1 75 aa1.8□□□□□ -2.12
CDHR3-213ENST00000488386 KRTAP6-1Q3LI64 71 aa1.79□□□□□ -2.12
CDHR3-213ENST00000488386 KRTAP5-8O75690 187 aa1.78□□□□□ -2.12
CDHR3-213ENST00000488386 MT1AP04731 61 aa1.77□□□□□ -2.13
CDHR3-213ENST00000488386 KRTAP6-2Q3LI66 62 aa1.71□□□□□ -2.14
CDHR3-213ENST00000488386 KTN1-AS1Q86SY8 53 aa1.69□□□□□ -2.14
CDHR3-213ENST00000488386 KRTAP21-2Q3LI59 83 aa1.67□□□□□ -2.14
CDHR3-213ENST00000488386 AHNAKQ09666 5890 aaKnown RBP1.58□□□□□ -2.16
CDHR3-213ENST00000488386 MUC5BQ9HC84 5762 aaPredicted RBP1.57□□□□□ -2.16
CDHR3-213ENST00000488386 MUC5ACP98088 5654 aa1.55□□□□□ -2.16
CDHR3-213ENST00000488386 INE1O15225 51 aa1.21□□□□□ -2.22
CDHR3-213ENST00000488386 PHGR1C9JFL3 82 aa1.13□□□□□ -2.23
CDHR3-213ENST00000488386 PRM1P04553 51 aa0.94□□□□□ -2.26
CDHR3-213ENST00000488386 MUC16Q8WXI7 14507 aa0.89□□□□□ -2.27
CDHR3-213ENST00000488386 KRTAP21-1Q3LI58 79 aa0.85□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 13.2 ms