RNA–Protein interactions for RNA: ENST00000488206.5

TM2D1-208, Transcript of TM2 domain containing 1, humanhuman

TSL 5

Gene TM2D1, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D1-208ENST00000488206 H3BS24 57 aa5.98□□□□□ -1.45
TM2D1-208ENST00000488206 NEBP20929 6669 aa5.98□□□□□ -1.45
TM2D1-208ENST00000488206 MUC12Q9UKN1 5478 aa5.96□□□□□ -1.46
TM2D1-208ENST00000488206 ROMO1P60602 79 aa5.94□□□□□ -1.46
TM2D1-208ENST00000488206 LCE3AQ5TA76 89 aa5.91□□□□□ -1.46
TM2D1-208ENST00000488206 MDN1Q9NU22 5596 aa5.88□□□□□ -1.47
TM2D1-208ENST00000488206 KRTAP19-7Q3SYF9 63 aa5.84□□□□□ -1.47
TM2D1-208ENST00000488206 SPRR2EP22531 72 aa5.82□□□□□ -1.48
TM2D1-208ENST00000488206 SPRR2BP35325 72 aa5.82□□□□□ -1.48
TM2D1-208ENST00000488206 SPRR2AP35326 72 aa5.82□□□□□ -1.48
TM2D1-208ENST00000488206 KRTAP19-5Q3LI72 72 aa5.82□□□□□ -1.48
TM2D1-208ENST00000488206 MT1EP04732 61 aa5.8□□□□□ -1.48
TM2D1-208ENST00000488206 KRTAP23-1A1A580 65 aa5.78□□□□□ -1.48
TM2D1-208ENST00000488206 LCE1AQ5T7P2 110 aa5.78□□□□□ -1.48
TM2D1-208ENST00000488206 KRTAP12-3P60328 96 aa5.7□□□□□ -1.5
TM2D1-208ENST00000488206 PP632Q6XCG6 107 aa5.69□□□□□ -1.5
TM2D1-208ENST00000488206 KRTAP19-3Q7Z4W3 81 aa5.66□□□□□ -1.5
TM2D1-208ENST00000488206 PMAIP1Q13794 54 aa5.64□□□□□ -1.51
TM2D1-208ENST00000488206 SPRR2DP22532 72 aa5.63□□□□□ -1.51
TM2D1-208ENST00000488206 PRO0628Q9UI54 55 aa5.63□□□□□ -1.51
TM2D1-208ENST00000488206 MT1LQ93083 61 aa5.61□□□□□ -1.51
TM2D1-208ENST00000488206 MT1GP13640 62 aa5.56□□□□□ -1.52
TM2D1-208ENST00000488206 KRTAP20-1Q3LI63 56 aa5.53□□□□□ -1.52
TM2D1-208ENST00000488206 KRTAP2-3P0C7H8 128 aa5.48□□□□□ -1.53
TM2D1-208ENST00000488206 MT1MQ8N339 61 aa5.48□□□□□ -1.53
TM2D1-208ENST00000488206 KRTAP2-4Q9BYR9 128 aa5.48□□□□□ -1.53
TM2D1-208ENST00000488206 KRTAP15-1Q3LI76 137 aa5.46□□□□□ -1.54
TM2D1-208ENST00000488206 KRTAP2-2Q9BYT5 123 aa5.33□□□□□ -1.56
TM2D1-208ENST00000488206 KRTAP2-1Q9BYU5 128 aa5.33□□□□□ -1.56
TM2D1-208ENST00000488206 PRAC1Q96KF2 57 aa5.32□□□□□ -1.56
TM2D1-208ENST00000488206 KTN1-AS1Q86SY8 53 aa5.3□□□□□ -1.56
TM2D1-208ENST00000488206 KRTAP4-3Q9BYR4 195 aa5.3□□□□□ -1.56
TM2D1-208ENST00000488206 LCE3CQ5T5A8 94 aa5.28□□□□□ -1.56
TM2D1-208ENST00000488206 DSTQ03001 7570 aaKnown RBP5.27□□□□□ -1.57
TM2D1-208ENST00000488206 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.07□□□□□ -1.6
TM2D1-208ENST00000488206 SVIPQ8NHG7 77 aa5.02□□□□□ -1.61
TM2D1-208ENST00000488206 KRTAP5-5Q701N2 237 aaPredicted RBP4.98□□□□□ -1.61
TM2D1-208ENST00000488206 KRTAP5-4Q6L8H1 288 aa4.97□□□□□ -1.61
TM2D1-208ENST00000488206 KRTAP9-6A8MVA2 160 aa4.94□□□□□ -1.62
TM2D1-208ENST00000488206 KRTAP5-11Q6L8G4 156 aa4.92□□□□□ -1.62
TM2D1-208ENST00000488206 MT4P47944 62 aa4.86□□□□□ -1.63
TM2D1-208ENST00000488206 HMCN1Q96RW7 5635 aa4.83□□□□□ -1.64
TM2D1-208ENST00000488206 SPRR5A0A1B0GTR4 108 aa4.82□□□□□ -1.64
TM2D1-208ENST00000488206 MT1AP04731 61 aa4.79□□□□□ -1.64
TM2D1-208ENST00000488206 KRTAP12-4P60329 112 aa4.76□□□□□ -1.65
TM2D1-208ENST00000488206 SYNE1Q8NF91 8797 aaKnown RBP4.75□□□□□ -1.65
TM2D1-208ENST00000488206 KRTAP6-1Q3LI64 71 aa4.71□□□□□ -1.66
TM2D1-208ENST00000488206 KRTAP20-2Q3LI61 65 aa4.66□□□□□ -1.66
TM2D1-208ENST00000488206 AHNAK2Q8IVF2 5795 aa4.54□□□□□ -1.68
TM2D1-208ENST00000488206 GPR98Q8WXG9 6306 aa4.52□□□□□ -1.69
TM2D1-208ENST00000488206 LUZP6Q538Z0 58 aa4.47□□□□□ -1.69
TM2D1-208ENST00000488206 KRTAP5-2Q701N4 177 aa4.44□□□□□ -1.7
TM2D1-208ENST00000488206 KRTAP6-2Q3LI66 62 aa4.42□□□□□ -1.7
TM2D1-208ENST00000488206 LCE1EQ5T753 118 aa4.42□□□□□ -1.7
TM2D1-208ENST00000488206 KRTAP5-1Q6L8H4 278 aa4.39□□□□□ -1.71
TM2D1-208ENST00000488206 MT3P25713 68 aa4.35□□□□□ -1.71
TM2D1-208ENST00000488206 KRTAP5-10Q6L8G5 202 aa4.3□□□□□ -1.72
TM2D1-208ENST00000488206 KRTAP4-4Q9BYR3 166 aa4.27□□□□□ -1.73
TM2D1-208ENST00000488206 KRTAP5-7Q6L8G8 165 aa4.07□□□□□ -1.76
TM2D1-208ENST00000488206 OBSCNQ5VST9 7968 aa4.03□□□□□ -1.76
TM2D1-208ENST00000488206 NDUFAF8A1L188 74 aa3.99□□□□□ -1.77
TM2D1-208ENST00000488206 KRTAP5-8O75690 187 aa3.99□□□□□ -1.77
TM2D1-208ENST00000488206 LCE3DQ9BYE3 92 aa3.89□□□□□ -1.79
TM2D1-208ENST00000488206 MUC5ACP98088 5654 aa3.87□□□□□ -1.79
TM2D1-208ENST00000488206 LCE3EQ5T5B0 92 aa3.74□□□□□ -1.81
TM2D1-208ENST00000488206 MUC5BQ9HC84 5762 aaPredicted RBP3.65□□□□□ -1.83
TM2D1-208ENST00000488206 AHNAKQ09666 5890 aaKnown RBP3.64□□□□□ -1.83
TM2D1-208ENST00000488206 LCE1BQ5T7P3 118 aa3.62□□□□□ -1.83
TM2D1-208ENST00000488206 LCE1CQ5T751 118 aa3.61□□□□□ -1.83
TM2D1-208ENST00000488206 A0A0A0MQY5 61 aa3.43□□□□□ -1.86
TM2D1-208ENST00000488206 LCE1FQ5T754 118 aa3.41□□□□□ -1.86
TM2D1-208ENST00000488206 INE1O15225 51 aa3.32□□□□□ -1.88
TM2D1-208ENST00000488206 KRTAP21-2Q3LI59 83 aa3.09□□□□□ -1.91
TM2D1-208ENST00000488206 PRM1P04553 51 aa3.06□□□□□ -1.92
TM2D1-208ENST00000488206 PHGR1C9JFL3 82 aa2.78□□□□□ -1.96
TM2D1-208ENST00000488206 MUC19Q7Z5P9 8384 aa2.45□□□□□ -2.02
TM2D1-208ENST00000488206 KRTAP21-1Q3LI58 79 aa1.9□□□□□ -2.11
TM2D1-208ENST00000488206 MUC16Q8WXI7 14507 aa1.78□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 108 ms