RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 KRTAP4-7Q9BYR0 210 aa5.86□□□□□ -1.47
C9orf3-219ENST00000488186 KRTAP2-4Q9BYR9 128 aa5.86□□□□□ -1.47
C9orf3-219ENST00000488186 KRTAP19-5Q3LI72 72 aa5.84□□□□□ -1.47
C9orf3-219ENST00000488186 KRTAP19-7Q3SYF9 63 aa5.84□□□□□ -1.47
C9orf3-219ENST00000488186 LCE1DQ5T752 114 aa5.84□□□□□ -1.47
C9orf3-219ENST00000488186 MT1EP04732 61 aa5.8□□□□□ -1.48
C9orf3-219ENST00000488186 ROMO1P60602 79 aa5.8□□□□□ -1.48
C9orf3-219ENST00000488186 SPRR2DP22532 72 aa5.78□□□□□ -1.48
C9orf3-219ENST00000488186 H3BS24 57 aa5.77□□□□□ -1.49
C9orf3-219ENST00000488186 BRK1Q8WUW1 75 aa5.75□□□□□ -1.49
C9orf3-219ENST00000488186 KRTAP19-3Q7Z4W3 81 aa5.7□□□□□ -1.5
C9orf3-219ENST00000488186 LCE5AQ5TCM9 118 aa5.69□□□□□ -1.5
C9orf3-219ENST00000488186 KRTAP4-9Q9BYQ8 210 aa5.69□□□□□ -1.5
C9orf3-219ENST00000488186 KRTAP2-2Q9BYT5 123 aa5.69□□□□□ -1.5
C9orf3-219ENST00000488186 KRTAP2-1Q9BYU5 128 aa5.69□□□□□ -1.5
C9orf3-219ENST00000488186 KRTAP23-1A1A580 65 aa5.67□□□□□ -1.5
C9orf3-219ENST00000488186 KRTAP12-3P60328 96 aa5.67□□□□□ -1.5
C9orf3-219ENST00000488186 MT1GP13640 62 aa5.62□□□□□ -1.51
C9orf3-219ENST00000488186 PP632Q6XCG6 107 aa5.62□□□□□ -1.51
C9orf3-219ENST00000488186 KRTAP4-2Q9BYR5 136 aa5.62□□□□□ -1.51
C9orf3-219ENST00000488186 MT1LQ93083 61 aa5.61□□□□□ -1.51
C9orf3-219ENST00000488186 LCE4AQ5TA78 99 aa5.51□□□□□ -1.53
C9orf3-219ENST00000488186 MT1MQ8N339 61 aa5.51□□□□□ -1.53
C9orf3-219ENST00000488186 DSTQ03001 7570 aaKnown RBP5.48□□□□□ -1.53
C9orf3-219ENST00000488186 KRTAP4-11Q9BYQ6 195 aa5.47□□□□□ -1.53
C9orf3-219ENST00000488186 KRTAP19-4Q3LI73 84 aa5.44□□□□□ -1.54
C9orf3-219ENST00000488186 PMAIP1Q13794 54 aa5.43□□□□□ -1.54
C9orf3-219ENST00000488186 KRTAP15-1Q3LI76 137 aa5.43□□□□□ -1.54
C9orf3-219ENST00000488186 KRTAP4-3Q9BYR4 195 aa5.36□□□□□ -1.55
C9orf3-219ENST00000488186 PRO0628Q9UI54 55 aa5.29□□□□□ -1.56
C9orf3-219ENST00000488186 LCE3CQ5T5A8 94 aa5.26□□□□□ -1.57
C9orf3-219ENST00000488186 KRTAP5-4Q6L8H1 288 aa5.15□□□□□ -1.59
C9orf3-219ENST00000488186 PRAC1Q96KF2 57 aa5.1□□□□□ -1.59
C9orf3-219ENST00000488186 SVIPQ8NHG7 77 aa5.09□□□□□ -1.59
C9orf3-219ENST00000488186 KRTAP5-3Q6L8H2 238 aa5.08□□□□□ -1.6
C9orf3-219ENST00000488186 KRTAP5-5Q701N2 237 aaPredicted RBP5.03□□□□□ -1.6
C9orf3-219ENST00000488186 MT4P47944 62 aa5.02□□□□□ -1.61
C9orf3-219ENST00000488186 HMCN1Q96RW7 5635 aa4.99□□□□□ -1.61
C9orf3-219ENST00000488186 KTN1-AS1Q86SY8 53 aa4.98□□□□□ -1.61
C9orf3-219ENST00000488186 KRTAP9-6A8MVA2 160 aa4.87□□□□□ -1.63
C9orf3-219ENST00000488186 KRTAP12-4P60329 112 aa4.87□□□□□ -1.63
C9orf3-219ENST00000488186 GPR98Q8WXG9 6306 aa4.86□□□□□ -1.63
C9orf3-219ENST00000488186 SPRR5A0A1B0GTR4 108 aa4.86□□□□□ -1.63
C9orf3-219ENST00000488186 KRTAP20-2Q3LI61 65 aa4.79□□□□□ -1.64
C9orf3-219ENST00000488186 MT1AP04731 61 aa4.78□□□□□ -1.64
C9orf3-219ENST00000488186 SYNE1Q8NF91 8797 aaKnown RBP4.76□□□□□ -1.65
C9orf3-219ENST00000488186 KRTAP6-1Q3LI64 71 aa4.72□□□□□ -1.65
C9orf3-219ENST00000488186 AHNAK2Q8IVF2 5795 aa4.72□□□□□ -1.65
C9orf3-219ENST00000488186 KRTAP5-10Q6L8G5 202 aa4.65□□□□□ -1.67
C9orf3-219ENST00000488186 KRTAP5-2Q701N4 177 aa4.55□□□□□ -1.68
C9orf3-219ENST00000488186 KRTAP6-2Q3LI66 62 aa4.47□□□□□ -1.69
C9orf3-219ENST00000488186 KRTAP5-7Q6L8G8 165 aa4.46□□□□□ -1.7
C9orf3-219ENST00000488186 MT3P25713 68 aa4.4□□□□□ -1.71
C9orf3-219ENST00000488186 LUZP6Q538Z0 58 aa4.36□□□□□ -1.71
C9orf3-219ENST00000488186 KRTAP5-8O75690 187 aa4.19□□□□□ -1.74
C9orf3-219ENST00000488186 OBSCNQ5VST9 7968 aa4.18□□□□□ -1.74
C9orf3-219ENST00000488186 KRTAP5-1Q6L8H4 278 aa4.02□□□□□ -1.77
C9orf3-219ENST00000488186 LCE1EQ5T753 118 aa3.99□□□□□ -1.77
C9orf3-219ENST00000488186 A0A0A0MQY5 61 aa3.95□□□□□ -1.78
C9orf3-219ENST00000488186 MUC5ACP98088 5654 aa3.92□□□□□ -1.78
C9orf3-219ENST00000488186 LCE3DQ9BYE3 92 aa3.89□□□□□ -1.79
C9orf3-219ENST00000488186 MUC5BQ9HC84 5762 aaPredicted RBP3.87□□□□□ -1.79
C9orf3-219ENST00000488186 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.82□□□□□ -1.8
C9orf3-219ENST00000488186 AHNAKQ09666 5890 aaKnown RBP3.81□□□□□ -1.8
C9orf3-219ENST00000488186 NDUFAF8A1L188 74 aa3.78□□□□□ -1.8
C9orf3-219ENST00000488186 LCE1BQ5T7P3 118 aa3.72□□□□□ -1.81
C9orf3-219ENST00000488186 LCE3EQ5T5B0 92 aa3.71□□□□□ -1.82
C9orf3-219ENST00000488186 KRTAP5-11Q6L8G4 156 aa3.69□□□□□ -1.82
C9orf3-219ENST00000488186 LCE1CQ5T751 118 aa3.68□□□□□ -1.82
C9orf3-219ENST00000488186 LCE1FQ5T754 118 aa3.22□□□□□ -1.89
C9orf3-219ENST00000488186 KRTAP4-4Q9BYR3 166 aa3.15□□□□□ -1.91
C9orf3-219ENST00000488186 INE1O15225 51 aa3.11□□□□□ -1.91
C9orf3-219ENST00000488186 KRTAP21-2Q3LI59 83 aa3.09□□□□□ -1.91
C9orf3-219ENST00000488186 PRM1P04553 51 aa2.98□□□□□ -1.93
C9orf3-219ENST00000488186 PHGR1C9JFL3 82 aa2.84□□□□□ -1.95
C9orf3-219ENST00000488186 MUC19Q7Z5P9 8384 aa2.56□□□□□ -2
C9orf3-219ENST00000488186 KRTAP21-1Q3LI58 79 aa2.06□□□□□ -2.08
C9orf3-219ENST00000488186 MUC16Q8WXI7 14507 aa1.84□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 103.4 ms