RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 KRTAP8-1Q8IUC2 63 aa1.91□□□□□ -2.1
CDC42BPA-213ENST00000488131 RYR2Q92736 4967 aa1.89□□□□□ -2.11
CDC42BPA-213ENST00000488131 RYR1P21817 5038 aa1.87□□□□□ -2.11
CDC42BPA-213ENST00000488131 KRTAP4-1Q9BYQ7 146 aa1.87□□□□□ -2.11
CDC42BPA-213ENST00000488131 KRTAP10-10P60014 251 aa1.86□□□□□ -2.11
CDC42BPA-213ENST00000488131 SPRR2GQ9BYE4 73 aa1.86□□□□□ -2.11
CDC42BPA-213ENST00000488131 LCE3DQ9BYE3 92 aa1.84□□□□□ -2.12
CDC42BPA-213ENST00000488131 KRTAP12-3P60328 96 aa1.81□□□□□ -2.12
CDC42BPA-213ENST00000488131 RYR3Q15413 4870 aa1.78□□□□□ -2.12
CDC42BPA-213ENST00000488131 ABCA13Q86UQ4 5058 aa1.77□□□□□ -2.13
CDC42BPA-213ENST00000488131 KIAA1109Q2LD37 5005 aa1.75□□□□□ -2.13
CDC42BPA-213ENST00000488131 KRTAP2-3P0C7H8 128 aa1.75□□□□□ -2.13
CDC42BPA-213ENST00000488131 KRTAP2-4Q9BYR9 128 aa1.75□□□□□ -2.13
CDC42BPA-213ENST00000488131 KRTAP2-1Q9BYU5 128 aa1.75□□□□□ -2.13
CDC42BPA-213ENST00000488131 KRTAP19-8Q3LI54 63 aa1.74□□□□□ -2.13
CDC42BPA-213ENST00000488131 MUC5BQ9HC84 5762 aaPredicted RBP1.74□□□□□ -2.13
CDC42BPA-213ENST00000488131 MT1XP80297 61 aa1.72□□□□□ -2.13
CDC42BPA-213ENST00000488131 PCLOQ9Y6V0 5065 aa1.72□□□□□ -2.13
CDC42BPA-213ENST00000488131 BIRC6Q9NR09 4857 aa1.71□□□□□ -2.14
CDC42BPA-213ENST00000488131 KRTAP21-3Q3LHN1 58 aa1.69□□□□□ -2.14
CDC42BPA-213ENST00000488131 HERC2O95714 4834 aa1.69□□□□□ -2.14
CDC42BPA-213ENST00000488131 MUC19Q7Z5P9 8384 aa1.68□□□□□ -2.14
CDC42BPA-213ENST00000488131 MT1BP07438 61 aa1.68□□□□□ -2.14
CDC42BPA-213ENST00000488131 GPR98Q8WXG9 6306 aa1.67□□□□□ -2.14
CDC42BPA-213ENST00000488131 MT2AP02795 61 aa1.66□□□□□ -2.14
CDC42BPA-213ENST00000488131 MT1FP04733 61 aa1.66□□□□□ -2.14
CDC42BPA-213ENST00000488131 HMCN2Q8NDA2 5059 aa1.66□□□□□ -2.14
CDC42BPA-213ENST00000488131 KRTAP19-5Q3LI72 72 aa1.65□□□□□ -2.15
CDC42BPA-213ENST00000488131 MUC2Q02817 5179 aa1.64□□□□□ -2.15
CDC42BPA-213ENST00000488131 UBR4Q5T4S7 5183 aa1.63□□□□□ -2.15
CDC42BPA-213ENST00000488131 M0R2T5 61 aa1.62□□□□□ -2.15
CDC42BPA-213ENST00000488131 MT1HP80294 61 aa1.61□□□□□ -2.15
CDC42BPA-213ENST00000488131 EPPK1P58107 5090 aaKnown RBP1.59□□□□□ -2.16
CDC42BPA-213ENST00000488131 FAT4Q6V0I7 4981 aa1.58□□□□□ -2.16
CDC42BPA-213ENST00000488131 KRTAP5-7Q6L8G8 165 aa1.57□□□□□ -2.16
CDC42BPA-213ENST00000488131 KRTAP12-4P60329 112 aa1.54□□□□□ -2.16
CDC42BPA-213ENST00000488131 KRTAP19-7Q3SYF9 63 aa1.54□□□□□ -2.16
CDC42BPA-213ENST00000488131 KRTAP6-3Q3LI67 103 aa1.52□□□□□ -2.17
CDC42BPA-213ENST00000488131 MT1LQ93083 61 aa1.51□□□□□ -2.17
CDC42BPA-213ENST00000488131 MT1EP04732 61 aa1.49□□□□□ -2.17
CDC42BPA-213ENST00000488131 RNF213Q63HN8 5207 aa1.47□□□□□ -2.17
CDC42BPA-213ENST00000488131 AHNAKQ09666 5890 aaKnown RBP1.45□□□□□ -2.18
CDC42BPA-213ENST00000488131 KRTAP21-2Q3LI59 83 aa1.45□□□□□ -2.18
CDC42BPA-213ENST00000488131 MT1AP04731 61 aa1.43□□□□□ -2.18
CDC42BPA-213ENST00000488131 KMT2DO14686 5537 aa1.42□□□□□ -2.18
CDC42BPA-213ENST00000488131 PRM1P04553 51 aa1.4□□□□□ -2.19
CDC42BPA-213ENST00000488131 MT1GP13640 62 aa1.38□□□□□ -2.19
CDC42BPA-213ENST00000488131 MT1MQ8N339 61 aa1.36□□□□□ -2.19
CDC42BPA-213ENST00000488131 KRTAP19-3Q7Z4W3 81 aa1.33□□□□□ -2.2
CDC42BPA-213ENST00000488131 USH2AO75445 5202 aa1.32□□□□□ -2.2
CDC42BPA-213ENST00000488131 SSPOA2VEC9 5147 aa1.31□□□□□ -2.2
CDC42BPA-213ENST00000488131 KRTAP6-2Q3LI66 62 aa1.29□□□□□ -2.2
CDC42BPA-213ENST00000488131 SPRR2FQ96RM1 72 aa1.29□□□□□ -2.2
CDC42BPA-213ENST00000488131 CRCT1Q9UGL9 99 aa1.29□□□□□ -2.2
CDC42BPA-213ENST00000488131 SYNE1Q8NF91 8797 aaKnown RBP1.28□□□□□ -2.2
CDC42BPA-213ENST00000488131 KRTAP6-1Q3LI64 71 aa1.26□□□□□ -2.21
CDC42BPA-213ENST00000488131 KRTAP19-6Q3LI70 58 aa1.24□□□□□ -2.21
CDC42BPA-213ENST00000488131 AHNAK2Q8IVF2 5795 aa1.23□□□□□ -2.21
CDC42BPA-213ENST00000488131 SPRR2AP35326 72 aa1.22□□□□□ -2.21
CDC42BPA-213ENST00000488131 FCGBPQ9Y6R7 5405 aaPredicted RBP1.2□□□□□ -2.22
CDC42BPA-213ENST00000488131 MUC12Q9UKN1 5478 aa1.18□□□□□ -2.22
CDC42BPA-213ENST00000488131 SPRR2EP22531 72 aa1.18□□□□□ -2.22
CDC42BPA-213ENST00000488131 MACF1Q9UPN3 7388 aaKnown RBP1.17□□□□□ -2.22
CDC42BPA-213ENST00000488131 SPRR2BP35325 72 aa1.16□□□□□ -2.22
CDC42BPA-213ENST00000488131 SPRR2DP22532 72 aa1.14□□□□□ -2.23
CDC42BPA-213ENST00000488131 DSTQ03001 7570 aaKnown RBP1.08□□□□□ -2.24
CDC42BPA-213ENST00000488131 MUC5ACP98088 5654 aa1.04□□□□□ -2.24
CDC42BPA-213ENST00000488131 MDN1Q9NU22 5596 aa1.01□□□□□ -2.25
CDC42BPA-213ENST00000488131 FSIP2Q5CZC0 6907 aa1□□□□□ -2.25
CDC42BPA-213ENST00000488131 KRTAP5-10Q6L8G5 202 aa0.99□□□□□ -2.25
CDC42BPA-213ENST00000488131 SYNE2Q8WXH0 6885 aaKnown RBP0.99□□□□□ -2.25
CDC42BPA-213ENST00000488131 KRTAP21-1Q3LI58 79 aa0.95□□□□□ -2.26
CDC42BPA-213ENST00000488131 NEBP20929 6669 aa0.93□□□□□ -2.26
CDC42BPA-213ENST00000488131 KRTAP20-2Q3LI61 65 aa0.85□□□□□ -2.27
CDC42BPA-213ENST00000488131 KRTAP20-1Q3LI63 56 aa0.84□□□□□ -2.28
CDC42BPA-213ENST00000488131 MT4P47944 62 aa0.75□□□□□ -2.29
CDC42BPA-213ENST00000488131 MUC16Q8WXI7 14507 aa0.67□□□□□ -2.3
CDC42BPA-213ENST00000488131 PHGR1C9JFL3 82 aa0.59□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 148.7 ms