RNA–Protein interactions for RNA: ENST00000488010.5

TMF1-203, Transcript of TATA element modulatory factor 1, humanhuman

TSL 5

Gene TMF1, Length 3,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-203ENST00000488010 LCE4AQ5TA78 99 aa3.55□□□□□ -1.84
TMF1-203ENST00000488010 KRTAP9-9Q9BYP9 154 aa3.55□□□□□ -1.84
TMF1-203ENST00000488010 KRTAP9-4Q9BYQ2 154 aa3.55□□□□□ -1.84
TMF1-203ENST00000488010 KRTAP19-7Q3SYF9 63 aa3.48□□□□□ -1.85
TMF1-203ENST00000488010 KRTAP9-7A8MTY7 169 aa3.46□□□□□ -1.86
TMF1-203ENST00000488010 KRTAP2-3P0C7H8 128 aa3.44□□□□□ -1.86
TMF1-203ENST00000488010 KRTAP2-4Q9BYR9 128 aa3.44□□□□□ -1.86
TMF1-203ENST00000488010 KRTAP2-1Q9BYU5 128 aa3.44□□□□□ -1.86
TMF1-203ENST00000488010 LCE1DQ5T752 114 aa3.42□□□□□ -1.86
TMF1-203ENST00000488010 MT1LQ93083 61 aa3.4□□□□□ -1.87
TMF1-203ENST00000488010 MT1EP04732 61 aa3.37□□□□□ -1.87
TMF1-203ENST00000488010 FSIP2Q5CZC0 6907 aa3.36□□□□□ -1.87
TMF1-203ENST00000488010 CRCT1Q9UGL9 99 aa3.32□□□□□ -1.88
TMF1-203ENST00000488010 KRTAP4-3Q9BYR4 195 aa3.31□□□□□ -1.88
TMF1-203ENST00000488010 MT1GP13640 62 aa3.27□□□□□ -1.89
TMF1-203ENST00000488010 LCE5AQ5TCM9 118 aa3.27□□□□□ -1.89
TMF1-203ENST00000488010 KRTAP4-9Q9BYQ8 210 aa3.26□□□□□ -1.89
TMF1-203ENST00000488010 SSPOA2VEC9 5147 aa3.25□□□□□ -1.89
TMF1-203ENST00000488010 MUC12Q9UKN1 5478 aa3.21□□□□□ -1.9
TMF1-203ENST00000488010 FCGBPQ9Y6R7 5405 aaPredicted RBP3.19□□□□□ -1.9
TMF1-203ENST00000488010 KRTAP4-11Q9BYQ6 195 aa3.19□□□□□ -1.9
TMF1-203ENST00000488010 KRTAP12-4P60329 112 aa3.19□□□□□ -1.9
TMF1-203ENST00000488010 DSTQ03001 7570 aaKnown RBP3.18□□□□□ -1.9
TMF1-203ENST00000488010 KRTAP4-2Q9BYR5 136 aa3.16□□□□□ -1.9
TMF1-203ENST00000488010 MT1MQ8N339 61 aa3.15□□□□□ -1.91
TMF1-203ENST00000488010 KRTAP19-6Q3LI70 58 aa3.12□□□□□ -1.91
TMF1-203ENST00000488010 KRTAP19-3Q7Z4W3 81 aa3.12□□□□□ -1.91
TMF1-203ENST00000488010 OBSCNQ5VST9 7968 aa3.09□□□□□ -1.91
TMF1-203ENST00000488010 SYNE1Q8NF91 8797 aaKnown RBP3.07□□□□□ -1.92
TMF1-203ENST00000488010 SPRR2FQ96RM1 72 aa3.02□□□□□ -1.93
TMF1-203ENST00000488010 SYNE2Q8WXH0 6885 aaKnown RBP2.93□□□□□ -1.94
TMF1-203ENST00000488010 KRTAP6-1Q3LI64 71 aa2.92□□□□□ -1.94
TMF1-203ENST00000488010 LCE3DQ9BYE3 92 aa2.89□□□□□ -1.95
TMF1-203ENST00000488010 MACF1Q9UPN3 7388 aaKnown RBP2.89□□□□□ -1.95
TMF1-203ENST00000488010 LCE3EQ5T5B0 92 aa2.86□□□□□ -1.95
TMF1-203ENST00000488010 MT1AP04731 61 aa2.85□□□□□ -1.95
TMF1-203ENST00000488010 PRM1P04553 51 aa2.85□□□□□ -1.95
TMF1-203ENST00000488010 MDN1Q9NU22 5596 aa2.81□□□□□ -1.96
TMF1-203ENST00000488010 KRTAP5-5Q701N2 237 aaPredicted RBP2.8□□□□□ -1.96
TMF1-203ENST00000488010 LCE1AQ5T7P2 110 aa2.7□□□□□ -1.98
TMF1-203ENST00000488010 KRTAP6-2Q3LI66 62 aa2.7□□□□□ -1.98
TMF1-203ENST00000488010 KRTAP5-3Q6L8H2 238 aa2.7□□□□□ -1.98
TMF1-203ENST00000488010 SPRR2EP22531 72 aa2.68□□□□□ -1.98
TMF1-203ENST00000488010 SPRR2BP35325 72 aa2.68□□□□□ -1.98
TMF1-203ENST00000488010 SPRR2AP35326 72 aa2.68□□□□□ -1.98
TMF1-203ENST00000488010 KRTAP5-9P26371 169 aa2.57□□□□□ -2
TMF1-203ENST00000488010 SPRR2DP22532 72 aa2.55□□□□□ -2
TMF1-203ENST00000488010 MT3P25713 68 aa2.55□□□□□ -2
TMF1-203ENST00000488010 KRTAP6-3Q3LI67 103 aa2.5□□□□□ -2.01
TMF1-203ENST00000488010 KRTAP2-2Q9BYT5 123 aa2.48□□□□□ -2.01
TMF1-203ENST00000488010 MT4P47944 62 aa2.32□□□□□ -2.04
TMF1-203ENST00000488010 KRTAP5-4Q6L8H1 288 aa2.25□□□□□ -2.05
TMF1-203ENST00000488010 NEBP20929 6669 aa2.24□□□□□ -2.05
TMF1-203ENST00000488010 MUC19Q7Z5P9 8384 aa2.23□□□□□ -2.05
TMF1-203ENST00000488010 MUC5ACP98088 5654 aa2.2□□□□□ -2.06
TMF1-203ENST00000488010 KRTAP20-2Q3LI61 65 aa2.19□□□□□ -2.06
TMF1-203ENST00000488010 LCE1FQ5T754 118 aa2.19□□□□□ -2.06
TMF1-203ENST00000488010 KRTAP20-1Q3LI63 56 aa2.16□□□□□ -2.06
TMF1-203ENST00000488010 LCE1EQ5T753 118 aa2.16□□□□□ -2.06
TMF1-203ENST00000488010 LCE1BQ5T7P3 118 aa2.16□□□□□ -2.06
TMF1-203ENST00000488010 KRTAP5-11Q6L8G4 156 aa2.15□□□□□ -2.06
TMF1-203ENST00000488010 KRTAP5-2Q701N4 177 aa2.13□□□□□ -2.07
TMF1-203ENST00000488010 HMCN1Q96RW7 5635 aa2.13□□□□□ -2.07
TMF1-203ENST00000488010 KRTAP5-10Q6L8G5 202 aa2.06□□□□□ -2.08
TMF1-203ENST00000488010 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.01□□□□□ -2.09
TMF1-203ENST00000488010 KRTAP5-1Q6L8H4 278 aa1.95□□□□□ -2.1
TMF1-203ENST00000488010 GPR98Q8WXG9 6306 aa1.9□□□□□ -2.11
TMF1-203ENST00000488010 LCE1CQ5T751 118 aa1.87□□□□□ -2.11
TMF1-203ENST00000488010 KRTAP21-2Q3LI59 83 aa1.83□□□□□ -2.12
TMF1-203ENST00000488010 KRTAP4-4Q9BYR3 166 aa1.83□□□□□ -2.12
TMF1-203ENST00000488010 KRTAP21-1Q3LI58 79 aa1.72□□□□□ -2.13
TMF1-203ENST00000488010 AHNAK2Q8IVF2 5795 aa1.71□□□□□ -2.14
TMF1-203ENST00000488010 KRTAP5-8O75690 187 aa1.66□□□□□ -2.14
TMF1-203ENST00000488010 MUC5BQ9HC84 5762 aaPredicted RBP1.63□□□□□ -2.15
TMF1-203ENST00000488010 KRTAP5-7Q6L8G8 165 aa1.57□□□□□ -2.16
TMF1-203ENST00000488010 AHNAKQ09666 5890 aaKnown RBP1.45□□□□□ -2.18
TMF1-203ENST00000488010 PHGR1C9JFL3 82 aa1.39□□□□□ -2.19
TMF1-203ENST00000488010 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 61 ms