RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 MT1XP80297 61 aa1.81□□□□□ -2.12
BRCA1-217ENST00000487825 AHNAKQ09666 5890 aaKnown RBP1.8□□□□□ -2.12
BRCA1-217ENST00000487825 H1FX-AS1Q4G0G2 97 aa1.8□□□□□ -2.12
BRCA1-217ENST00000487825 ZNF815PA8K554 130 aa1.79□□□□□ -2.12
BRCA1-217ENST00000487825 PDE6GP18545 87 aa1.79□□□□□ -2.12
BRCA1-217ENST00000487825 COX7BP24311 80 aa1.79□□□□□ -2.12
BRCA1-217ENST00000487825 Q6JHZ5 121 aa1.79□□□□□ -2.12
BRCA1-217ENST00000487825 LINC01546A6NGU7 62 aa1.78□□□□□ -2.12
BRCA1-217ENST00000487825 F8WEM9 126 aa1.78□□□□□ -2.12
BRCA1-217ENST00000487825 MYMXA0A1B0GTQ4 84 aa1.77□□□□□ -2.13
BRCA1-217ENST00000487825 JMJD7-PLA2G4BH0Y9G9 81 aa1.77□□□□□ -2.13
BRCA1-217ENST00000487825 C20orf197Q8N268 126 aa1.77□□□□□ -2.13
BRCA1-217ENST00000487825 ZCCHC13Q8WW36 166 aaKnown RBP1.77□□□□□ -2.13
BRCA1-217ENST00000487825 MUC5ACP98088 5654 aa1.76□□□□□ -2.13
BRCA1-217ENST00000487825 IGKV3D-7A0A0C4DH55 119 aa1.74□□□□□ -2.13
BRCA1-217ENST00000487825 COX8AP10176 69 aa1.74□□□□□ -2.13
BRCA1-217ENST00000487825 BAGE3Q86Y29 109 aa1.74□□□□□ -2.13
BRCA1-217ENST00000487825 MUC5BQ9HC84 5762 aaPredicted RBP1.73□□□□□ -2.13
BRCA1-217ENST00000487825 ATP5EP2Q5VTU8 51 aa1.72□□□□□ -2.13
BRCA1-217ENST00000487825 INE1O15225 51 aa1.71□□□□□ -2.14
BRCA1-217ENST00000487825 DNAL4O96015 105 aa1.71□□□□□ -2.14
BRCA1-217ENST00000487825 CRIPTQ9P021 101 aa1.71□□□□□ -2.14
BRCA1-217ENST00000487825 LINC01558Q9Y6Z2 57 aa1.71□□□□□ -2.14
BRCA1-217ENST00000487825 LOC110117498A0A087WWA1 95 aa1.7□□□□□ -2.14
BRCA1-217ENST00000487825 LEPROTL1O95214 131 aa1.7□□□□□ -2.14
BRCA1-217ENST00000487825 C3orf79P0CE67 100 aa1.7□□□□□ -2.14
BRCA1-217ENST00000487825 KRTAP19-3Q7Z4W3 81 aa1.7□□□□□ -2.14
BRCA1-217ENST00000487825 MUSTN1Q8IVN3 82 aa1.69□□□□□ -2.14
BRCA1-217ENST00000487825 LINC00308Q8TCZ7 52 aa1.69□□□□□ -2.14
BRCA1-217ENST00000487825 PRR15LQ9BU68 103 aa1.69□□□□□ -2.14
BRCA1-217ENST00000487825 UQCR11O14957 56 aa1.68□□□□□ -2.14
BRCA1-217ENST00000487825 Q6ZQY7 126 aa1.68□□□□□ -2.14
BRCA1-217ENST00000487825 TRBV7-4A0A0J9YYF1 115 aa1.67□□□□□ -2.14
BRCA1-217ENST00000487825 KRTAP20-2Q3LI61 65 aa1.67□□□□□ -2.14
BRCA1-217ENST00000487825 COA5Q86WW8 74 aa1.67□□□□□ -2.14
BRCA1-217ENST00000487825 A0A087WVE0 104 aa1.66□□□□□ -2.14
BRCA1-217ENST00000487825 LINC00575Q6W349 94 aa1.64□□□□□ -2.15
BRCA1-217ENST00000487825 PLAC4Q8WY50 150 aa1.64□□□□□ -2.15
BRCA1-217ENST00000487825 LINC00208Q96KT6 92 aa1.64□□□□□ -2.15
BRCA1-217ENST00000487825 LINC00472Q9H8W2 130 aa1.64□□□□□ -2.15
BRCA1-217ENST00000487825 ATXN8Q156A1 80 aa1.63□□□□□ -2.15
BRCA1-217ENST00000487825 SMIM11BQ8TCY0 68 aa1.63□□□□□ -2.15
BRCA1-217ENST00000487825 SNURFQ9Y675 71 aa1.63□□□□□ -2.15
BRCA1-217ENST00000487825 S4R3F8 94 aa1.63□□□□□ -2.15
BRCA1-217ENST00000487825 H0Y9P7 68 aa1.62□□□□□ -2.15
BRCA1-217ENST00000487825 MT1EP04732 61 aa1.62□□□□□ -2.15
BRCA1-217ENST00000487825 KRTAP19-7Q3SYF9 63 aa1.62□□□□□ -2.15
BRCA1-217ENST00000487825 H0YAA0 97 aa1.61□□□□□ -2.15
BRCA1-217ENST00000487825 NDUFB1O75438 58 aa1.61□□□□□ -2.15
BRCA1-217ENST00000487825 PLNP26678 52 aa1.61□□□□□ -2.15
BRCA1-217ENST00000487825 SPATA8Q6RVD6 105 aa1.61□□□□□ -2.15
BRCA1-217ENST00000487825 MT1GP13640 62 aa1.6□□□□□ -2.15
BRCA1-217ENST00000487825 K7EQZ3 153 aa1.58□□□□□ -2.16
BRCA1-217ENST00000487825 ACYP2P14621 99 aa1.58□□□□□ -2.16
BRCA1-217ENST00000487825 MT1MQ8N339 61 aa1.58□□□□□ -2.16
BRCA1-217ENST00000487825 NREPQ16612 68 aa1.56□□□□□ -2.16
BRCA1-217ENST00000487825 KRTAP13-4Q3LI77 160 aa1.56□□□□□ -2.16
BRCA1-217ENST00000487825 A0A1B0GU69 56 aa1.51□□□□□ -2.17
BRCA1-217ENST00000487825 MRPL34Q9BQ48 92 aaKnown RBP1.51□□□□□ -2.17
BRCA1-217ENST00000487825 SYNE1Q8NF91 8797 aaKnown RBP1.51□□□□□ -2.17
BRCA1-217ENST00000487825 UBL5Q9BZL1 73 aa1.49□□□□□ -2.17
BRCA1-217ENST00000487825 MMP24-AS1A0A0U1RRL7 71 aa1.48□□□□□ -2.17
BRCA1-217ENST00000487825 MT1LQ93083 61 aa1.48□□□□□ -2.17
BRCA1-217ENST00000487825 KRTAP19-5Q3LI72 72 aa1.45□□□□□ -2.18
BRCA1-217ENST00000487825 M0QZ58 72 aa1.44□□□□□ -2.18
BRCA1-217ENST00000487825 H0YGX0 51 aa1.43□□□□□ -2.18
BRCA1-217ENST00000487825 KRTAP12-1P59990 96 aa1.37□□□□□ -2.19
BRCA1-217ENST00000487825 A0A0D9SG42 100 aa1.35□□□□□ -2.19
BRCA1-217ENST00000487825 TP53AIP1Q9HCN2 124 aa1.32□□□□□ -2.2
BRCA1-217ENST00000487825 KRTAP6-2Q3LI66 62 aa1.29□□□□□ -2.2
BRCA1-217ENST00000487825 C10orf95Q9H7T3 257 aa1.28□□□□□ -2.2
BRCA1-217ENST00000487825 KRTAP6-1Q3LI64 71 aa1.27□□□□□ -2.21
BRCA1-217ENST00000487825 MT1AP04731 61 aa1.25□□□□□ -2.21
BRCA1-217ENST00000487825 PHGR1C9JFL3 82 aa1.19□□□□□ -2.22
BRCA1-217ENST00000487825 TNP1P09430 55 aa1.08□□□□□ -2.24
BRCA1-217ENST00000487825 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.25
BRCA1-217ENST00000487825 KRTAP21-1Q3LI58 79 aa0.91□□□□□ -2.26
BRCA1-217ENST00000487825 PRM1P04553 51 aa0.72□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 12.3 ms