RNA–Protein interactions for RNA: ENST00000487673.5

PTK7-215, Transcript of protein tyrosine kinase 7 (inactive), human

TSL 2

Gene PTK7, Length 5,282 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK7-215	ENST00000487673	MT1E	P04732	61 aa		4.78	□□□□□ -1.64
PTK7-215	ENST00000487673	MT1L	Q93083	61 aa		4.78	□□□□□ -1.64
PTK7-215	ENST00000487673	KRTAP4-7	Q9BYR0	210 aa		4.73	□□□□□ -1.65
PTK7-215	ENST00000487673	MT1M	Q8N339	61 aa		4.62	□□□□□ -1.67
PTK7-215	ENST00000487673	HMCN2	Q8NDA2	5059 aa		4.62	□□□□□ -1.67
PTK7-215	ENST00000487673	LCE3D	Q9BYE3	92 aa		4.57	□□□□□ -1.68
PTK7-215	ENST00000487673	SYNE1	Q8NF91	8797 aa	Known RBP	4.57	□□□□□ -1.68
PTK7-215	ENST00000487673	KRTAP9-6	A0A140TA67	174 aa		4.57	□□□□□ -1.68
PTK7-215	ENST00000487673	LCE3E	Q5T5B0	92 aa		4.52	□□□□□ -1.69
PTK7-215	ENST00000487673	MUC2	Q02817	5179 aa		4.5	□□□□□ -1.69
PTK7-215	ENST00000487673	KRTAP19-7	Q3SYF9	63 aa		4.47	□□□□□ -1.69
PTK7-215	ENST00000487673	KRTAP4-3	Q9BYR4	195 aa		4.46	□□□□□ -1.69
PTK7-215	ENST00000487673	LOC100996750	A0A140TA64	210 aa		4.43	□□□□□ -1.7
PTK7-215	ENST00000487673	MT3	P25713	68 aa		4.43	□□□□□ -1.7
PTK7-215	ENST00000487673	MT4	P47944	62 aa		4.4	□□□□□ -1.7
PTK7-215	ENST00000487673	LCE1A	Q5T7P2	110 aa		4.33	□□□□□ -1.72
PTK7-215	ENST00000487673	KRTAP6-3	Q3LI67	103 aa		4.33	□□□□□ -1.72
PTK7-215	ENST00000487673	KRTAP9-7	A8MTY7	169 aa		4.29	□□□□□ -1.72
PTK7-215	ENST00000487673	MT1A	P04731	61 aa		4.29	□□□□□ -1.72
PTK7-215	ENST00000487673	SYNE2	Q8WXH0	6885 aa	Known RBP	4.23	□□□□□ -1.73
PTK7-215	ENST00000487673	KRTAP20-1	Q3LI63	56 aa		4.22	□□□□□ -1.73
PTK7-215	ENST00000487673	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	4.2	□□□□□ -1.74
PTK7-215	ENST00000487673	PRM1	P04553	51 aa		4.19	□□□□□ -1.74
PTK7-215	ENST00000487673	KRTAP2-3	P0C7H8	128 aa		4.14	□□□□□ -1.75
PTK7-215	ENST00000487673	KRTAP2-4	Q9BYR9	128 aa		4.14	□□□□□ -1.75
PTK7-215	ENST00000487673	LCE5A	Q5TCM9	118 aa		4.14	□□□□□ -1.75
PTK7-215	ENST00000487673	LCE1D	Q5T752	114 aa		4.11	□□□□□ -1.75
PTK7-215	ENST00000487673	KRTAP2-1	Q9BYU5	128 aa		4.11	□□□□□ -1.75
PTK7-215	ENST00000487673	OBSCN	Q5VST9	7968 aa		4.1	□□□□□ -1.75
PTK7-215	ENST00000487673	LCE1B	Q5T7P3	118 aa		4.09	□□□□□ -1.75
PTK7-215	ENST00000487673	USH2A	O75445	5202 aa		4.07	□□□□□ -1.76
PTK7-215	ENST00000487673	KRTAP4-9	Q9BYQ8	210 aa		4.06	□□□□□ -1.76
PTK7-215	ENST00000487673	LCE4A	Q5TA78	99 aa		4.04	□□□□□ -1.76
PTK7-215	ENST00000487673	KRTAP2-2	Q9BYT5	123 aa		4.02	□□□□□ -1.77
PTK7-215	ENST00000487673	KRTAP9-6	A8MVA2	160 aa		4.01	□□□□□ -1.77
PTK7-215	ENST00000487673	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	3.98	□□□□□ -1.77
PTK7-215	ENST00000487673	KRTAP6-1	Q3LI64	71 aa		3.98	□□□□□ -1.77
PTK7-215	ENST00000487673	KRTAP9-4	Q9BYQ2	154 aa		3.94	□□□□□ -1.78
PTK7-215	ENST00000487673	KRTAP6-2	Q3LI66	62 aa		3.9	□□□□□ -1.78
PTK7-215	ENST00000487673	DST	Q03001	7570 aa	Known RBP	3.87	□□□□□ -1.79
PTK7-215	ENST00000487673	KMT2D	O14686	5537 aa		3.84	□□□□□ -1.79
PTK7-215	ENST00000487673	KRTAP5-9	P26371	169 aa		3.79	□□□□□ -1.8
PTK7-215	ENST00000487673	MACF1	Q9UPN3	7388 aa	Known RBP	3.77	□□□□□ -1.81
PTK7-215	ENST00000487673	SSPO	A2VEC9	5147 aa		3.7	□□□□□ -1.82
PTK7-215	ENST00000487673	MUC12	Q9UKN1	5478 aa		3.67	□□□□□ -1.82
PTK7-215	ENST00000487673	NEB	P20929	6669 aa		3.65	□□□□□ -1.83
PTK7-215	ENST00000487673	MDN1	Q9NU22	5596 aa		3.56	□□□□□ -1.84
PTK7-215	ENST00000487673	KRTAP4-6	Q9BYQ5	205 aa		3.43	□□□□□ -1.86
PTK7-215	ENST00000487673	LCE1C	Q5T751	118 aa		3.42	□□□□□ -1.86
PTK7-215	ENST00000487673	LCE1E	Q5T753	118 aa		3.42	□□□□□ -1.86
PTK7-215	ENST00000487673	LCE1F	Q5T754	118 aa		3.42	□□□□□ -1.86
PTK7-215	ENST00000487673	KRTAP20-2	Q3LI61	65 aa		3.41	□□□□□ -1.86
PTK7-215	ENST00000487673	KRTAP9-9	Q9BYP9	154 aa		3.39	□□□□□ -1.87
PTK7-215	ENST00000487673	GPR98	Q8WXG9	6306 aa		3.25	□□□□□ -1.89
PTK7-215	ENST00000487673	MUC19	Q7Z5P9	8384 aa		3.24	□□□□□ -1.89
PTK7-215	ENST00000487673	KRTAP5-4	Q6L8H1	288 aa		3.24	□□□□□ -1.89
PTK7-215	ENST00000487673	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.12	□□□□□ -1.91
PTK7-215	ENST00000487673	KRTAP4-11	Q9BYQ6	195 aa		3.07	□□□□□ -1.92
PTK7-215	ENST00000487673	KRTAP4-12	Q9BQ66	201 aa		2.92	□□□□□ -1.94
PTK7-215	ENST00000487673	KRTAP4-2	Q9BYR5	136 aa		2.92	□□□□□ -1.94
PTK7-215	ENST00000487673	KRTAP4-4	Q9BYR3	166 aa		2.91	□□□□□ -1.94
PTK7-215	ENST00000487673	MUC5AC	P98088	5654 aa		2.9	□□□□□ -1.95
PTK7-215	ENST00000487673	KRTAP5-3	Q6L8H2	238 aa		2.86	□□□□□ -1.95
PTK7-215	ENST00000487673	AHNAK2	Q8IVF2	5795 aa		2.8	□□□□□ -1.96
PTK7-215	ENST00000487673	HMCN1	Q96RW7	5635 aa		2.79	□□□□□ -1.96
PTK7-215	ENST00000487673	KRTAP5-2	Q701N4	177 aa		2.64	□□□□□ -1.99
PTK7-215	ENST00000487673	KRTAP5-8	O75690	187 aa		2.59	□□□□□ -2
PTK7-215	ENST00000487673	KRTAP5-10	Q6L8G5	202 aa		2.4	□□□□□ -2.03
PTK7-215	ENST00000487673	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.34	□□□□□ -2.04
PTK7-215	ENST00000487673	KRTAP5-11	Q6L8G4	156 aa		2.3	□□□□□ -2.04
PTK7-215	ENST00000487673	AHNAK	Q09666	5890 aa	Known RBP	2.3	□□□□□ -2.04
PTK7-215	ENST00000487673	KRTAP5-1	Q6L8H4	278 aa		2.29	□□□□□ -2.04
PTK7-215	ENST00000487673	PHGR1	C9JFL3	82 aa		2.18	□□□□□ -2.06
PTK7-215	ENST00000487673	KRTAP21-2	Q3LI59	83 aa		2.12	□□□□□ -2.07
PTK7-215	ENST00000487673	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.1	□□□□□ -2.07
PTK7-215	ENST00000487673	KRTAP5-7	Q6L8G8	165 aa		2.07	□□□□□ -2.08
PTK7-215	ENST00000487673	KRTAP21-1	Q3LI58	79 aa		1.93	□□□□□ -2.1
PTK7-215	ENST00000487673	MUC16	Q8WXI7	14507 aa		1.35	□□□□□ -2.19

Retrieved 78 of 20,778 RNA–protein pairs in 189.7 ms