RNA–Protein interactions for RNA: ENST00000487294.1

R3HDM1-218, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-218ENST00000487294 HMCN1Q96RW7 5635 aa1.88□□□□□ -2.11
R3HDM1-218ENST00000487294 MT1GP13640 62 aa1.87□□□□□ -2.11
R3HDM1-218ENST00000487294 CYSTM1Q9H1C7 97 aa1.87□□□□□ -2.11
R3HDM1-218ENST00000487294 PMAIP1Q13794 54 aa1.86□□□□□ -2.11
R3HDM1-218ENST00000487294 ATP5EP2Q5VTU8 51 aa1.86□□□□□ -2.11
R3HDM1-218ENST00000487294 DMAC1Q96GE9 116 aa1.86□□□□□ -2.11
R3HDM1-218ENST00000487294 LINC00208Q96KT6 92 aa1.86□□□□□ -2.11
R3HDM1-218ENST00000487294 MT4P47944 62 aa1.85□□□□□ -2.11
R3HDM1-218ENST00000487294 F8W1H4 67 aa1.84□□□□□ -2.11
R3HDM1-218ENST00000487294 J3QR89 54 aa1.84□□□□□ -2.11
R3HDM1-218ENST00000487294 PSPHP1O15172 72 aa1.84□□□□□ -2.11
R3HDM1-218ENST00000487294 COL5A1-AS1Q5SY13 56 aa1.84□□□□□ -2.11
R3HDM1-218ENST00000487294 MT-ATP8P03928 68 aa1.83□□□□□ -2.12
R3HDM1-218ENST00000487294 ETDBQ3ZM63 59 aa1.83□□□□□ -2.12
R3HDM1-218ENST00000487294 ANAPC13Q9BS18 74 aa1.83□□□□□ -2.12
R3HDM1-218ENST00000487294 TRAV7A0A075B6U4 112 aa1.82□□□□□ -2.12
R3HDM1-218ENST00000487294 SMIM26A0A096LP01 95 aa1.82□□□□□ -2.12
R3HDM1-218ENST00000487294 H3BPC8 53 aa1.82□□□□□ -2.12
R3HDM1-218ENST00000487294 MP68P56378 58 aa1.82□□□□□ -2.12
R3HDM1-218ENST00000487294 KRTAP21-2Q3LI59 83 aa1.82□□□□□ -2.12
R3HDM1-218ENST00000487294 GTF2H5Q6ZYL4 71 aa1.82□□□□□ -2.12
R3HDM1-218ENST00000487294 CAMK2N1Q7Z7J9 78 aa1.82□□□□□ -2.12
R3HDM1-218ENST00000487294 AHNAK2Q8IVF2 5795 aa1.81□□□□□ -2.12
R3HDM1-218ENST00000487294 HIST1H4AP62805 103 aaKnown RBP1.81□□□□□ -2.12
R3HDM1-218ENST00000487294 MT1MQ8N339 61 aa1.81□□□□□ -2.12
R3HDM1-218ENST00000487294 KRTAP19-5Q3LI72 72 aa1.78□□□□□ -2.12
R3HDM1-218ENST00000487294 LINC00643Q86TS7 51 aa1.78□□□□□ -2.12
R3HDM1-218ENST00000487294 MT1LQ93083 61 aa1.78□□□□□ -2.12
R3HDM1-218ENST00000487294 ACYP2P14621 99 aa1.77□□□□□ -2.13
R3HDM1-218ENST00000487294 SPTSSBQ8NFR3 76 aa1.77□□□□□ -2.13
R3HDM1-218ENST00000487294 A0A0D9SG42 100 aa1.76□□□□□ -2.13
R3HDM1-218ENST00000487294 KRTAP13-4Q3LI77 160 aa1.76□□□□□ -2.13
R3HDM1-218ENST00000487294 KRTAP20-2Q3LI61 65 aa1.74□□□□□ -2.13
R3HDM1-218ENST00000487294 KTN1-AS1Q86SY8 53 aa1.74□□□□□ -2.13
R3HDM1-218ENST00000487294 BRK1Q8WUW1 75 aa1.74□□□□□ -2.13
R3HDM1-218ENST00000487294 CCDC179H3BU77 68 aa1.73□□□□□ -2.13
R3HDM1-218ENST00000487294 TMEM258P61165 79 aa1.73□□□□□ -2.13
R3HDM1-218ENST00000487294 CHKB-CPT1BH3BT56 60 aa1.69□□□□□ -2.14
R3HDM1-218ENST00000487294 K7ERS5 55 aa1.68□□□□□ -2.14
R3HDM1-218ENST00000487294 KRTAP12-4P60329 112 aa1.68□□□□□ -2.14
R3HDM1-218ENST00000487294 SERP1Q9Y6X1 66 aa1.68□□□□□ -2.14
R3HDM1-218ENST00000487294 LUZP6Q538Z0 58 aa1.67□□□□□ -2.14
R3HDM1-218ENST00000487294 C10orf95Q9H7T3 257 aa1.67□□□□□ -2.14
R3HDM1-218ENST00000487294 KRTAP12-1P59990 96 aa1.66□□□□□ -2.14
R3HDM1-218ENST00000487294 SPANXA2-OT1Q8N9U9 137 aa1.65□□□□□ -2.15
R3HDM1-218ENST00000487294 COX7CP15954 63 aa1.64□□□□□ -2.15
R3HDM1-218ENST00000487294 SYNE1Q8NF91 8797 aaKnown RBP1.63□□□□□ -2.15
R3HDM1-218ENST00000487294 ATP5EP56381 51 aaPredicted RBP1.63□□□□□ -2.15
R3HDM1-218ENST00000487294 KRTAP12-3P60328 96 aa1.63□□□□□ -2.15
R3HDM1-218ENST00000487294 A6NED7 52 aa1.62□□□□□ -2.15
R3HDM1-218ENST00000487294 TNP1P09430 55 aa1.62□□□□□ -2.15
R3HDM1-218ENST00000487294 SPINT4Q6UDR6 99 aa1.62□□□□□ -2.15
R3HDM1-218ENST00000487294 SPATA8Q6RVD6 105 aa1.61□□□□□ -2.15
R3HDM1-218ENST00000487294 A0A1B0GU33 70 aa1.6□□□□□ -2.15
R3HDM1-218ENST00000487294 SERP2Q8N6R1 65 aa1.58□□□□□ -2.16
R3HDM1-218ENST00000487294 SNURFQ9Y675 71 aa1.58□□□□□ -2.16
R3HDM1-218ENST00000487294 MUC5ACP98088 5654 aa1.57□□□□□ -2.16
R3HDM1-218ENST00000487294 COA5Q86WW8 74 aa1.56□□□□□ -2.16
R3HDM1-218ENST00000487294 Q1T7F1 81 aa1.55□□□□□ -2.16
R3HDM1-218ENST00000487294 AHNAKQ09666 5890 aaKnown RBP1.55□□□□□ -2.16
R3HDM1-218ENST00000487294 MUC5BQ9HC84 5762 aaPredicted RBP1.54□□□□□ -2.16
R3HDM1-218ENST00000487294 MT1AP04731 61 aa1.52□□□□□ -2.17
R3HDM1-218ENST00000487294 ROMO1P60602 79 aa1.52□□□□□ -2.17
R3HDM1-218ENST00000487294 H7BZZ5 65 aa1.5□□□□□ -2.17
R3HDM1-218ENST00000487294 KRTAP6-1Q3LI64 71 aa1.5□□□□□ -2.17
R3HDM1-218ENST00000487294 CDC42SE1Q9NRR8 79 aa1.5□□□□□ -2.17
R3HDM1-218ENST00000487294 A0A1B0GU69 56 aa1.48□□□□□ -2.17
R3HDM1-218ENST00000487294 MIR22HGQ0VDD5 57 aa1.47□□□□□ -2.17
R3HDM1-218ENST00000487294 KRTAP25-1Q3LHN0 102 aa1.47□□□□□ -2.17
R3HDM1-218ENST00000487294 KRTAP6-2Q3LI66 62 aa1.46□□□□□ -2.18
R3HDM1-218ENST00000487294 PRR15LQ9BU68 103 aa1.41□□□□□ -2.18
R3HDM1-218ENST00000487294 UQCR11O14957 56 aa1.36□□□□□ -2.19
R3HDM1-218ENST00000487294 LINC01558Q9Y6Z2 57 aa1.36□□□□□ -2.19
R3HDM1-218ENST00000487294 INE1O15225 51 aa1.26□□□□□ -2.21
R3HDM1-218ENST00000487294 PHGR1C9JFL3 82 aa1.08□□□□□ -2.24
R3HDM1-218ENST00000487294 MUC16Q8WXI7 14507 aa0.88□□□□□ -2.27
R3HDM1-218ENST00000487294 KRTAP21-1Q3LI58 79 aa0.85□□□□□ -2.27
R3HDM1-218ENST00000487294 PRM1P04553 51 aa0.6□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 109 ms