RNA–Protein interactions for RNA: ENST00000487109.5

ABCA2-218, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 1 (best)

Gene ABCA2, Length 8,031 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-218ENST00000487109 MUC17Q685J3 4493 aa3.69□□□□□ -1.82
ABCA2-218ENST00000487109 KRTAP9-6A0A140TA67 174 aa3.63□□□□□ -1.83
ABCA2-218ENST00000487109 KIAA1109Q2LD37 5005 aa3.61□□□□□ -1.83
ABCA2-218ENST00000487109 HERC2O95714 4834 aa3.6□□□□□ -1.83
ABCA2-218ENST00000487109 BIRC6Q9NR09 4857 aa3.6□□□□□ -1.83
ABCA2-218ENST00000487109 PCLOQ9Y6V0 5065 aa3.59□□□□□ -1.83
ABCA2-218ENST00000487109 SYNE2Q8WXH0 6885 aaKnown RBP3.59□□□□□ -1.83
ABCA2-218ENST00000487109 KRTAP4-3Q9BYR4 195 aa3.59□□□□□ -1.84
ABCA2-218ENST00000487109 LCE2AQ5TA79 106 aaPredicted RBP3.58□□□□□ -1.84
ABCA2-218ENST00000487109 MT1AP04731 61 aa3.58□□□□□ -1.84
ABCA2-218ENST00000487109 KMT2CQ8NEZ4 4911 aaKnown RBP3.57□□□□□ -1.84
ABCA2-218ENST00000487109 LCE1AQ5T7P2 110 aa3.56□□□□□ -1.84
ABCA2-218ENST00000487109 KRTAP20-1Q3LI63 56 aa3.56□□□□□ -1.84
ABCA2-218ENST00000487109 LCE1CQ5T751 118 aa3.51□□□□□ -1.85
ABCA2-218ENST00000487109 LCE1EQ5T753 118 aa3.51□□□□□ -1.85
ABCA2-218ENST00000487109 LCE1FQ5T754 118 aa3.51□□□□□ -1.85
ABCA2-218ENST00000487109 KRTAP19-7Q3SYF9 63 aa3.49□□□□□ -1.85
ABCA2-218ENST00000487109 KRTAP4-9Q9BYQ8 210 aa3.48□□□□□ -1.85
ABCA2-218ENST00000487109 KRTAP6-3Q3LI67 103 aa3.48□□□□□ -1.85
ABCA2-218ENST00000487109 KRTAP2-3P0C7H8 128 aa3.45□□□□□ -1.86
ABCA2-218ENST00000487109 KRTAP2-4Q9BYR9 128 aa3.45□□□□□ -1.86
ABCA2-218ENST00000487109 KRTAP2-1Q9BYU5 128 aa3.45□□□□□ -1.86
ABCA2-218ENST00000487109 LCE4AQ5TA78 99 aa3.44□□□□□ -1.86
ABCA2-218ENST00000487109 KRTAP9-7A8MTY7 169 aa3.42□□□□□ -1.86
ABCA2-218ENST00000487109 KRTAP6-2Q3LI66 62 aa3.34□□□□□ -1.87
ABCA2-218ENST00000487109 KRTAP2-2Q9BYT5 123 aa3.3□□□□□ -1.88
ABCA2-218ENST00000487109 KRTAP9-4Q9BYQ2 154 aa3.3□□□□□ -1.88
ABCA2-218ENST00000487109 EPPK1P58107 5090 aaKnown RBP3.27□□□□□ -1.89
ABCA2-218ENST00000487109 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.27□□□□□ -1.89
ABCA2-218ENST00000487109 KRTAP6-1Q3LI64 71 aa3.21□□□□□ -1.9
ABCA2-218ENST00000487109 HMCN2Q8NDA2 5059 aa3.16□□□□□ -1.9
ABCA2-218ENST00000487109 RNF213Q63HN8 5207 aa3.13□□□□□ -1.91
ABCA2-218ENST00000487109 KRTAP9-9Q9BYP9 154 aa3.1□□□□□ -1.91
ABCA2-218ENST00000487109 FAT4Q6V0I7 4981 aa3.08□□□□□ -1.92
ABCA2-218ENST00000487109 KRTAP9-6A8MVA2 160 aa3.07□□□□□ -1.92
ABCA2-218ENST00000487109 FSIP2Q5CZC0 6907 aa3.05□□□□□ -1.92
ABCA2-218ENST00000487109 MUC2Q02817 5179 aa3.02□□□□□ -1.93
ABCA2-218ENST00000487109 ABCA13Q86UQ4 5058 aa3.01□□□□□ -1.93
ABCA2-218ENST00000487109 SYNE1Q8NF91 8797 aaKnown RBP3□□□□□ -1.93
ABCA2-218ENST00000487109 UBR4Q5T4S7 5183 aa2.9□□□□□ -1.95
ABCA2-218ENST00000487109 KRTAP5-9P26371 169 aa2.89□□□□□ -1.95
ABCA2-218ENST00000487109 KRTAP4-11Q9BYQ6 195 aa2.86□□□□□ -1.95
ABCA2-218ENST00000487109 KRTAP20-2Q3LI61 65 aa2.84□□□□□ -1.95
ABCA2-218ENST00000487109 KMT2DO14686 5537 aa2.78□□□□□ -1.96
ABCA2-218ENST00000487109 OBSCNQ5VST9 7968 aa2.77□□□□□ -1.97
ABCA2-218ENST00000487109 KRTAP4-6Q9BYQ5 205 aa2.72□□□□□ -1.97
ABCA2-218ENST00000487109 KRTAP4-4Q9BYR3 166 aa2.68□□□□□ -1.98
ABCA2-218ENST00000487109 KRTAP4-12Q9BQ66 201 aa2.66□□□□□ -1.98
ABCA2-218ENST00000487109 KRTAP4-2Q9BYR5 136 aa2.66□□□□□ -1.98
ABCA2-218ENST00000487109 DSTQ03001 7570 aaKnown RBP2.65□□□□□ -1.99
ABCA2-218ENST00000487109 KRTAP5-4Q6L8H1 288 aa2.63□□□□□ -1.99
ABCA2-218ENST00000487109 NEBP20929 6669 aa2.62□□□□□ -1.99
ABCA2-218ENST00000487109 MACF1Q9UPN3 7388 aaKnown RBP2.49□□□□□ -2.01
ABCA2-218ENST00000487109 FCGBPQ9Y6R7 5405 aaPredicted RBP2.48□□□□□ -2.01
ABCA2-218ENST00000487109 SSPOA2VEC9 5147 aa2.48□□□□□ -2.01
ABCA2-218ENST00000487109 USH2AO75445 5202 aa2.43□□□□□ -2.02
ABCA2-218ENST00000487109 KRTAP5-5Q701N2 237 aaPredicted RBP2.38□□□□□ -2.03
ABCA2-218ENST00000487109 MUC19Q7Z5P9 8384 aa2.29□□□□□ -2.04
ABCA2-218ENST00000487109 KRTAP5-3Q6L8H2 238 aa2.27□□□□□ -2.05
ABCA2-218ENST00000487109 MDN1Q9NU22 5596 aa2.26□□□□□ -2.05
ABCA2-218ENST00000487109 GPR98Q8WXG9 6306 aa2.18□□□□□ -2.06
ABCA2-218ENST00000487109 MUC12Q9UKN1 5478 aa2.17□□□□□ -2.06
ABCA2-218ENST00000487109 MUC5ACP98088 5654 aa2.09□□□□□ -2.07
ABCA2-218ENST00000487109 PHGR1C9JFL3 82 aa2.06□□□□□ -2.08
ABCA2-218ENST00000487109 KRTAP5-8O75690 187 aa1.97□□□□□ -2.09
ABCA2-218ENST00000487109 KRTAP5-2Q701N4 177 aa1.96□□□□□ -2.1
ABCA2-218ENST00000487109 AHNAK2Q8IVF2 5795 aa1.91□□□□□ -2.1
ABCA2-218ENST00000487109 KRTAP5-10Q6L8G5 202 aa1.9□□□□□ -2.1
ABCA2-218ENST00000487109 KRTAP5-11Q6L8G4 156 aa1.84□□□□□ -2.12
ABCA2-218ENST00000487109 MUC5BQ9HC84 5762 aaPredicted RBP1.81□□□□□ -2.12
ABCA2-218ENST00000487109 HMCN1Q96RW7 5635 aa1.74□□□□□ -2.13
ABCA2-218ENST00000487109 KRTAP5-1Q6L8H4 278 aa1.67□□□□□ -2.14
ABCA2-218ENST00000487109 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.62□□□□□ -2.15
ABCA2-218ENST00000487109 KRTAP21-2Q3LI59 83 aa1.61□□□□□ -2.15
ABCA2-218ENST00000487109 AHNAKQ09666 5890 aaKnown RBP1.59□□□□□ -2.16
ABCA2-218ENST00000487109 KRTAP21-1Q3LI58 79 aa1.58□□□□□ -2.16
ABCA2-218ENST00000487109 KRTAP5-7Q6L8G8 165 aa1.56□□□□□ -2.16
ABCA2-218ENST00000487109 MUC16Q8WXI7 14507 aa1.26□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 12.5 ms