RNA–Protein interactions for RNA: ENST00000486995.5

PTCD2-204, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 2,648 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-204ENST00000486995 LCE5AQ5TCM9 118 aa4.18□□□□□ -1.74
PTCD2-204ENST00000486995 KRTAP2-4Q9BYR9 128 aa4.18□□□□□ -1.74
PTCD2-204ENST00000486995 KRTAP2-1Q9BYU5 128 aa4.18□□□□□ -1.74
PTCD2-204ENST00000486995 KRTAP9-4Q9BYQ2 154 aa4.16□□□□□ -1.74
PTCD2-204ENST00000486995 FCGBPQ9Y6R7 5405 aaPredicted RBP4.12□□□□□ -1.75
PTCD2-204ENST00000486995 MUC12Q9UKN1 5478 aa4.07□□□□□ -1.76
PTCD2-204ENST00000486995 KRTAP4-3Q9BYR4 195 aa4.07□□□□□ -1.76
PTCD2-204ENST00000486995 LCE4AQ5TA78 99 aa4.05□□□□□ -1.76
PTCD2-204ENST00000486995 KRTAP9-9Q9BYP9 154 aa4.05□□□□□ -1.76
PTCD2-204ENST00000486995 LOC100996750A0A140TA64 210 aa4.03□□□□□ -1.76
PTCD2-204ENST00000486995 KRTAP19-3Q7Z4W3 81 aa4.03□□□□□ -1.76
PTCD2-204ENST00000486995 MT1MQ8N339 61 aa4.02□□□□□ -1.77
PTCD2-204ENST00000486995 KRTAP9-6A0A140TA67 174 aa4.01□□□□□ -1.77
PTCD2-204ENST00000486995 KRTAP9-7A8MTY7 169 aa4.01□□□□□ -1.77
PTCD2-204ENST00000486995 MT1GP13640 62 aa4.01□□□□□ -1.77
PTCD2-204ENST00000486995 SPRR2FQ96RM1 72 aa3.9□□□□□ -1.79
PTCD2-204ENST00000486995 MACF1Q9UPN3 7388 aaKnown RBP3.88□□□□□ -1.79
PTCD2-204ENST00000486995 KRTAP9-2Q9BYQ4 174 aa3.88□□□□□ -1.79
PTCD2-204ENST00000486995 CRCT1Q9UGL9 99 aa3.88□□□□□ -1.79
PTCD2-204ENST00000486995 DSTQ03001 7570 aaKnown RBP3.85□□□□□ -1.79
PTCD2-204ENST00000486995 LCE1FQ5T754 118 aa3.79□□□□□ -1.8
PTCD2-204ENST00000486995 SYNE2Q8WXH0 6885 aaKnown RBP3.78□□□□□ -1.8
PTCD2-204ENST00000486995 MDN1Q9NU22 5596 aa3.73□□□□□ -1.81
PTCD2-204ENST00000486995 LCE3BQ5TA77 95 aa3.67□□□□□ -1.82
PTCD2-204ENST00000486995 KRTAP12-4P60329 112 aa3.66□□□□□ -1.82
PTCD2-204ENST00000486995 KRTAP5-9P26371 169 aa3.66□□□□□ -1.82
PTCD2-204ENST00000486995 LCE1AQ5T7P2 110 aa3.66□□□□□ -1.82
PTCD2-204ENST00000486995 KRTAP6-1Q3LI64 71 aa3.64□□□□□ -1.83
PTCD2-204ENST00000486995 KRTAP2-2Q9BYT5 123 aa3.62□□□□□ -1.83
PTCD2-204ENST00000486995 MT1AP04731 61 aa3.6□□□□□ -1.83
PTCD2-204ENST00000486995 KRTAP4-9Q9BYQ8 210 aa3.59□□□□□ -1.83
PTCD2-204ENST00000486995 KRTAP5-5Q701N2 237 aaPredicted RBP3.58□□□□□ -1.84
PTCD2-204ENST00000486995 SYNE1Q8NF91 8797 aaKnown RBP3.55□□□□□ -1.84
PTCD2-204ENST00000486995 SPRR2EP22531 72 aa3.55□□□□□ -1.84
PTCD2-204ENST00000486995 SPRR2BP35325 72 aa3.55□□□□□ -1.84
PTCD2-204ENST00000486995 SPRR2AP35326 72 aa3.55□□□□□ -1.84
PTCD2-204ENST00000486995 LCE3DQ9BYE3 92 aa3.45□□□□□ -1.86
PTCD2-204ENST00000486995 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.45□□□□□ -1.86
PTCD2-204ENST00000486995 LCE3EQ5T5B0 92 aa3.4□□□□□ -1.86
PTCD2-204ENST00000486995 SPRR2DP22532 72 aa3.4□□□□□ -1.87
PTCD2-204ENST00000486995 KRTAP6-3Q3LI67 103 aa3.35□□□□□ -1.87
PTCD2-204ENST00000486995 MT3P25713 68 aa3.33□□□□□ -1.88
PTCD2-204ENST00000486995 LCE1EQ5T753 118 aa3.31□□□□□ -1.88
PTCD2-204ENST00000486995 KRTAP4-12Q9BQ66 201 aa3.31□□□□□ -1.88
PTCD2-204ENST00000486995 KRTAP6-2Q3LI66 62 aa3.27□□□□□ -1.89
PTCD2-204ENST00000486995 PRM1P04553 51 aa3.23□□□□□ -1.89
PTCD2-204ENST00000486995 KRTAP5-4Q6L8H1 288 aa3.17□□□□□ -1.9
PTCD2-204ENST00000486995 NEBP20929 6669 aa3.17□□□□□ -1.9
PTCD2-204ENST00000486995 OBSCNQ5VST9 7968 aa3.15□□□□□ -1.91
PTCD2-204ENST00000486995 LCE1DQ5T752 114 aa3.14□□□□□ -1.91
PTCD2-204ENST00000486995 KRTAP4-6Q9BYQ5 205 aa3.08□□□□□ -1.92
PTCD2-204ENST00000486995 MT4P47944 62 aa2.99□□□□□ -1.93
PTCD2-204ENST00000486995 KRTAP20-2Q3LI61 65 aa2.96□□□□□ -1.94
PTCD2-204ENST00000486995 KRTAP5-2Q701N4 177 aa2.95□□□□□ -1.94
PTCD2-204ENST00000486995 HMCN1Q96RW7 5635 aa2.9□□□□□ -1.95
PTCD2-204ENST00000486995 KRTAP20-1Q3LI63 56 aa2.88□□□□□ -1.95
PTCD2-204ENST00000486995 KRTAP5-3Q6L8H2 238 aa2.84□□□□□ -1.96
PTCD2-204ENST00000486995 MUC5ACP98088 5654 aa2.75□□□□□ -1.97
PTCD2-204ENST00000486995 KRTAP4-11Q9BYQ6 195 aa2.66□□□□□ -1.98
PTCD2-204ENST00000486995 LCE1BQ5T7P3 118 aa2.6□□□□□ -1.99
PTCD2-204ENST00000486995 KRTAP5-10Q6L8G5 202 aa2.55□□□□□ -2
PTCD2-204ENST00000486995 KRTAP4-2Q9BYR5 136 aa2.54□□□□□ -2
PTCD2-204ENST00000486995 KRTAP5-1Q6L8H4 278 aa2.54□□□□□ -2
PTCD2-204ENST00000486995 LCE1CQ5T751 118 aa2.52□□□□□ -2.01
PTCD2-204ENST00000486995 GPR98Q8WXG9 6306 aa2.51□□□□□ -2.01
PTCD2-204ENST00000486995 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.38□□□□□ -2.03
PTCD2-204ENST00000486995 AHNAK2Q8IVF2 5795 aa2.38□□□□□ -2.03
PTCD2-204ENST00000486995 KRTAP21-2Q3LI59 83 aa2.37□□□□□ -2.03
PTCD2-204ENST00000486995 KRTAP5-8O75690 187 aa2.36□□□□□ -2.03
PTCD2-204ENST00000486995 KRTAP5-7Q6L8G8 165 aa2.33□□□□□ -2.04
PTCD2-204ENST00000486995 MUC19Q7Z5P9 8384 aa2.18□□□□□ -2.06
PTCD2-204ENST00000486995 KRTAP5-11Q6L8G4 156 aa2.17□□□□□ -2.06
PTCD2-204ENST00000486995 KRTAP4-4Q9BYR3 166 aa2.14□□□□□ -2.07
PTCD2-204ENST00000486995 MUC5BQ9HC84 5762 aaPredicted RBP2.12□□□□□ -2.07
PTCD2-204ENST00000486995 KRTAP21-1Q3LI58 79 aa2.04□□□□□ -2.08
PTCD2-204ENST00000486995 AHNAKQ09666 5890 aaKnown RBP2□□□□□ -2.09
PTCD2-204ENST00000486995 PHGR1C9JFL3 82 aa1.88□□□□□ -2.11
PTCD2-204ENST00000486995 MUC16Q8WXI7 14507 aa1.25□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 73 ms