RNA–Protein interactions for RNA: ENST00000486793.5

GMDS-205, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 3

Gene GMDS, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-205ENST00000486793 KRTAP5-3Q6L8H2 238 aa6.35□□□□□ -1.39
GMDS-205ENST00000486793 TNP1P09430 55 aa6.34□□□□□ -1.39
GMDS-205ENST00000486793 KRTAP4-7Q9BYR0 210 aa6.34□□□□□ -1.39
GMDS-205ENST00000486793 SMIM26A0A096LP01 95 aa6.33□□□□□ -1.4
GMDS-205ENST00000486793 KRTAP9-9Q9BYP9 154 aa6.33□□□□□ -1.4
GMDS-205ENST00000486793 KRTAP9-4Q9BYQ2 154 aa6.33□□□□□ -1.4
GMDS-205ENST00000486793 A8MU10 97 aa6.32□□□□□ -1.4
GMDS-205ENST00000486793 KRTAP20-2Q3LI61 65 aa6.25□□□□□ -1.41
GMDS-205ENST00000486793 A0A1B0GU69 56 aa6.22□□□□□ -1.41
GMDS-205ENST00000486793 KRTAP12-3P60328 96 aa6.2□□□□□ -1.42
GMDS-205ENST00000486793 SPRR5A0A1B0GTR4 108 aa6.17□□□□□ -1.42
GMDS-205ENST00000486793 KRTAP5-5Q701N2 237 aaPredicted RBP6.17□□□□□ -1.42
GMDS-205ENST00000486793 H7BZZ5 65 aa6.15□□□□□ -1.42
GMDS-205ENST00000486793 COX7CP15954 63 aa6.14□□□□□ -1.43
GMDS-205ENST00000486793 KRTAP12-4P60329 112 aa6.11□□□□□ -1.43
GMDS-205ENST00000486793 SYNE1Q8NF91 8797 aaKnown RBP6□□□□□ -1.45
GMDS-205ENST00000486793 PRR15LQ9BU68 103 aa5.9□□□□□ -1.46
GMDS-205ENST00000486793 KRTAP4-11Q9BYQ6 195 aa5.8□□□□□ -1.48
GMDS-205ENST00000486793 KRTAP4-2Q9BYR5 136 aa5.8□□□□□ -1.48
GMDS-205ENST00000486793 KRTAP25-1Q3LHN0 102 aa5.79□□□□□ -1.48
GMDS-205ENST00000486793 KRTAP19-4Q3LI73 84 aa5.79□□□□□ -1.48
GMDS-205ENST00000486793 LINC01558Q9Y6Z2 57 aa5.78□□□□□ -1.48
GMDS-205ENST00000486793 UQCR11O14957 56 aa5.72□□□□□ -1.49
GMDS-205ENST00000486793 KRTAP5-2Q701N4 177 aa5.7□□□□□ -1.5
GMDS-205ENST00000486793 ANAPC13Q9BS18 74 aa5.69□□□□□ -1.5
GMDS-205ENST00000486793 LCE3CQ5T5A8 94 aa5.68□□□□□ -1.5
GMDS-205ENST00000486793 KRTAP15-1Q3LI76 137 aa5.66□□□□□ -1.5
GMDS-205ENST00000486793 AHNAKQ09666 5890 aaKnown RBP5.64□□□□□ -1.51
GMDS-205ENST00000486793 CCDC179H3BU77 68 aa5.64□□□□□ -1.51
GMDS-205ENST00000486793 KRTAP6-1Q3LI64 71 aa5.64□□□□□ -1.51
GMDS-205ENST00000486793 MT1AP04731 61 aa5.63□□□□□ -1.51
GMDS-205ENST00000486793 ATP5EP56381 51 aaPredicted RBP5.62□□□□□ -1.51
GMDS-205ENST00000486793 KRTAP5-8O75690 187 aa5.61□□□□□ -1.51
GMDS-205ENST00000486793 MUC5ACP98088 5654 aa5.61□□□□□ -1.51
GMDS-205ENST00000486793 MUC5BQ9HC84 5762 aaPredicted RBP5.6□□□□□ -1.51
GMDS-205ENST00000486793 MIR22HGQ0VDD5 57 aa5.56□□□□□ -1.52
GMDS-205ENST00000486793 KRTAP23-1A1A580 65 aa5.55□□□□□ -1.52
GMDS-205ENST00000486793 K7ERS5 55 aa5.51□□□□□ -1.53
GMDS-205ENST00000486793 KRTAP6-2Q3LI66 62 aa5.47□□□□□ -1.53
GMDS-205ENST00000486793 OBSCNQ5VST9 7968 aa5.46□□□□□ -1.53
GMDS-205ENST00000486793 KRTAP9-6A8MVA2 160 aa5.38□□□□□ -1.55
GMDS-205ENST00000486793 TMEM258P61165 79 aa5.34□□□□□ -1.55
GMDS-205ENST00000486793 PSPHP1O15172 72 aa5.25□□□□□ -1.57
GMDS-205ENST00000486793 RPS28P62857 69 aaKnown RBP5.19□□□□□ -1.58
GMDS-205ENST00000486793 Q1T7F1 81 aa5.19□□□□□ -1.58
GMDS-205ENST00000486793 KRTAP5-1Q6L8H4 278 aa5.19□□□□□ -1.58
GMDS-205ENST00000486793 MT3P25713 68 aa5.18□□□□□ -1.58
GMDS-205ENST00000486793 CDC42SE1Q9NRR8 79 aa5.17□□□□□ -1.58
GMDS-205ENST00000486793 V9GYY9 64 aa5.15□□□□□ -1.59
GMDS-205ENST00000486793 ROMO1P60602 79 aa5.08□□□□□ -1.6
GMDS-205ENST00000486793 A6NED7 52 aa5.03□□□□□ -1.6
GMDS-205ENST00000486793 LCE1EQ5T753 118 aa4.84□□□□□ -1.63
GMDS-205ENST00000486793 H3BS24 57 aa4.78□□□□□ -1.64
GMDS-205ENST00000486793 LCE1BQ5T7P3 118 aa4.61□□□□□ -1.67
GMDS-205ENST00000486793 PCP4P48539 62 aa4.5□□□□□ -1.69
GMDS-205ENST00000486793 LCE1CQ5T751 118 aa4.49□□□□□ -1.69
GMDS-205ENST00000486793 KRTAP5-11Q6L8G4 156 aa4.08□□□□□ -1.76
GMDS-205ENST00000486793 LCE1FQ5T754 118 aa4.06□□□□□ -1.76
GMDS-205ENST00000486793 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.03□□□□□ -1.76
GMDS-205ENST00000486793 LCE3DQ9BYE3 92 aa4.02□□□□□ -1.77
GMDS-205ENST00000486793 PHGR1C9JFL3 82 aa3.85□□□□□ -1.79
GMDS-205ENST00000486793 BRK1Q8WUW1 75 aa3.84□□□□□ -1.79
GMDS-205ENST00000486793 KRTAP21-2Q3LI59 83 aa3.72□□□□□ -1.81
GMDS-205ENST00000486793 LCE3EQ5T5B0 92 aa3.71□□□□□ -1.82
GMDS-205ENST00000486793 PRAC1Q96KF2 57 aa3.6□□□□□ -1.83
GMDS-205ENST00000486793 PMAIP1Q13794 54 aa3.59□□□□□ -1.83
GMDS-205ENST00000486793 PRO0628Q9UI54 55 aa3.56□□□□□ -1.84
GMDS-205ENST00000486793 KRTAP4-4Q9BYR3 166 aa3.49□□□□□ -1.85
GMDS-205ENST00000486793 MUC19Q7Z5P9 8384 aa3.39□□□□□ -1.87
GMDS-205ENST00000486793 KTN1-AS1Q86SY8 53 aa3.35□□□□□ -1.87
GMDS-205ENST00000486793 SVIPQ8NHG7 77 aa3.18□□□□□ -1.9
GMDS-205ENST00000486793 LUZP6Q538Z0 58 aa3.08□□□□□ -1.92
GMDS-205ENST00000486793 KRTAP21-1Q3LI58 79 aa2.92□□□□□ -1.94
GMDS-205ENST00000486793 PRM1P04553 51 aa2.58□□□□□ -2
GMDS-205ENST00000486793 NDUFAF8A1L188 74 aa2.5□□□□□ -2.01
GMDS-205ENST00000486793 MUC16Q8WXI7 14507 aa2.29□□□□□ -2.04
GMDS-205ENST00000486793 A0A0A0MQY5 61 aa2.07□□□□□ -2.08
GMDS-205ENST00000486793 INE1O15225 51 aa2.06□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 10.7 ms