RNA–Protein interactions for RNA: ENST00000486585.1

PCMT1-208, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase, human

TSL 3

Gene PCMT1, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCMT1-208	ENST00000486585	SPANXA2-OT1	Q8N9U9	137 aa		3.44	□□□□□ -1.86
PCMT1-208	ENST00000486585	SERP1	Q9Y6X1	66 aa		3.44	□□□□□ -1.86
PCMT1-208	ENST00000486585	PRAC1	Q96KF2	57 aa		3.4	□□□□□ -1.87
PCMT1-208	ENST00000486585	KRTAP4-3	Q9BYR4	195 aa		3.39	□□□□□ -1.87
PCMT1-208	ENST00000486585	SNURF	Q9Y675	71 aa		3.38	□□□□□ -1.87
PCMT1-208	ENST00000486585		A0A1B0GU33	70 aa		3.37	□□□□□ -1.87
PCMT1-208	ENST00000486585	SPATA8	Q6RVD6	105 aa		3.37	□□□□□ -1.87
PCMT1-208	ENST00000486585	KRTAP12-1	P59990	96 aa		3.36	□□□□□ -1.87
PCMT1-208	ENST00000486585	C10orf95	Q9H7T3	257 aa		3.36	□□□□□ -1.87
PCMT1-208	ENST00000486585	TNP1	P09430	55 aa		3.33	□□□□□ -1.88
PCMT1-208	ENST00000486585	SPRR5	A0A1B0GTR4	108 aa		3.32	□□□□□ -1.88
PCMT1-208	ENST00000486585		A0A1B0GV90	55 aa		3.32	□□□□□ -1.88
PCMT1-208	ENST00000486585	MT3	P25713	68 aa		3.32	□□□□□ -1.88
PCMT1-208	ENST00000486585	LCE3A	Q5TA76	89 aa		3.32	□□□□□ -1.88
PCMT1-208	ENST00000486585	COA5	Q86WW8	74 aa		3.32	□□□□□ -1.88
PCMT1-208	ENST00000486585	KRTAP20-2	Q3LI61	65 aa		3.31	□□□□□ -1.88
PCMT1-208	ENST00000486585	SMIM26	A0A096LP01	95 aa		3.3	□□□□□ -1.88
PCMT1-208	ENST00000486585	KRTAP12-4	P60329	112 aa		3.29	□□□□□ -1.88
PCMT1-208	ENST00000486585	NDUFAF8	A1L188	74 aa		3.25	□□□□□ -1.89
PCMT1-208	ENST00000486585	SERP2	Q8N6R1	65 aa		3.25	□□□□□ -1.89
PCMT1-208	ENST00000486585	KRTAP12-3	P60328	96 aa		3.23	□□□□□ -1.89
PCMT1-208	ENST00000486585	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.23	□□□□□ -1.89
PCMT1-208	ENST00000486585		K7ERU9	68 aa		3.21	□□□□□ -1.9
PCMT1-208	ENST00000486585		A0A1B0GU69	56 aa		3.2	□□□□□ -1.9
PCMT1-208	ENST00000486585		A8MU10	97 aa		3.18	□□□□□ -1.9
PCMT1-208	ENST00000486585	AHNAK	Q09666	5890 aa	Known RBP	3.08	□□□□□ -1.92
PCMT1-208	ENST00000486585	PRR15L	Q9BU68	103 aa		3.07	□□□□□ -1.92
PCMT1-208	ENST00000486585		H7BZZ5	65 aa		3.06	□□□□□ -1.92
PCMT1-208	ENST00000486585	COX7C	P15954	63 aa		3.06	□□□□□ -1.92
PCMT1-208	ENST00000486585	SYNE1	Q8NF91	8797 aa	Known RBP	3.05	□□□□□ -1.92
PCMT1-208	ENST00000486585	KRTAP25-1	Q3LHN0	102 aa		3.03	□□□□□ -1.92
PCMT1-208	ENST00000486585	MUC5AC	P98088	5654 aa		3.03	□□□□□ -1.92
PCMT1-208	ENST00000486585	KRTAP5-2	Q701N4	177 aa		3.01	□□□□□ -1.93
PCMT1-208	ENST00000486585	KRTAP5-8	O75690	187 aa		2.98	□□□□□ -1.93
PCMT1-208	ENST00000486585	MT1A	P04731	61 aa		2.96	□□□□□ -1.94
PCMT1-208	ENST00000486585	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.96	□□□□□ -1.94
PCMT1-208	ENST00000486585	LCE3C	Q5T5A8	94 aa		2.95	□□□□□ -1.94
PCMT1-208	ENST00000486585	LCE1F	Q5T754	118 aa		2.95	□□□□□ -1.94
PCMT1-208	ENST00000486585	UQCR11	O14957	56 aa		2.94	□□□□□ -1.94
PCMT1-208	ENST00000486585	KRTAP6-1	Q3LI64	71 aa		2.92	□□□□□ -1.94
PCMT1-208	ENST00000486585	LINC01558	Q9Y6Z2	57 aa		2.91	□□□□□ -1.94
PCMT1-208	ENST00000486585		K7ERS5	55 aa		2.9	□□□□□ -1.95
PCMT1-208	ENST00000486585	OBSCN	Q5VST9	7968 aa		2.87	□□□□□ -1.95
PCMT1-208	ENST00000486585	ATP5E	P56381	51 aa	Predicted RBP	2.87	□□□□□ -1.95
PCMT1-208	ENST00000486585	KRTAP6-2	Q3LI66	62 aa		2.86	□□□□□ -1.95
PCMT1-208	ENST00000486585	MIR22HG	Q0VDD5	57 aa		2.82	□□□□□ -1.96
PCMT1-208	ENST00000486585	ANAPC13	Q9BS18	74 aa		2.82	□□□□□ -1.96
PCMT1-208	ENST00000486585	LCE1E	Q5T753	118 aa		2.79	□□□□□ -1.96
PCMT1-208	ENST00000486585	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.77	□□□□□ -1.97
PCMT1-208	ENST00000486585	KRTAP5-11	Q6L8G4	156 aa		2.74	□□□□□ -1.97
PCMT1-208	ENST00000486585	KRTAP5-1	Q6L8H4	278 aa		2.74	□□□□□ -1.97
PCMT1-208	ENST00000486585	KRTAP9-6	A8MVA2	160 aa		2.72	□□□□□ -1.97
PCMT1-208	ENST00000486585	RPS28	P62857	69 aa	Known RBP	2.72	□□□□□ -1.97
PCMT1-208	ENST00000486585	CCDC179	H3BU77	68 aa		2.71	□□□□□ -1.98
PCMT1-208	ENST00000486585	TMEM258	P61165	79 aa		2.66	□□□□□ -1.98
PCMT1-208	ENST00000486585	CDC42SE1	Q9NRR8	79 aa		2.66	□□□□□ -1.98
PCMT1-208	ENST00000486585		V9GYY9	64 aa		2.63	□□□□□ -1.99
PCMT1-208	ENST00000486585		Q1T7F1	81 aa		2.62	□□□□□ -1.99
PCMT1-208	ENST00000486585	PSPHP1	O15172	72 aa		2.6	□□□□□ -1.99
PCMT1-208	ENST00000486585	ROMO1	P60602	79 aa		2.58	□□□□□ -2
PCMT1-208	ENST00000486585		A6NED7	52 aa		2.53	□□□□□ -2
PCMT1-208	ENST00000486585	LCE3E	Q5T5B0	92 aa		2.53	□□□□□ -2
PCMT1-208	ENST00000486585	LCE1B	Q5T7P3	118 aa		2.43	□□□□□ -2.02
PCMT1-208	ENST00000486585	PRO0628	Q9UI54	55 aa		2.43	□□□□□ -2.02
PCMT1-208	ENST00000486585	LCE1C	Q5T751	118 aa		2.39	□□□□□ -2.03
PCMT1-208	ENST00000486585	KRTAP4-4	Q9BYR3	166 aa		2.33	□□□□□ -2.04
PCMT1-208	ENST00000486585	PMAIP1	Q13794	54 aa		2.29	□□□□□ -2.04
PCMT1-208	ENST00000486585	BRK1	Q8WUW1	75 aa		2.23	□□□□□ -2.05
PCMT1-208	ENST00000486585	KTN1-AS1	Q86SY8	53 aa		2.2	□□□□□ -2.06
PCMT1-208	ENST00000486585	LCE3D	Q9BYE3	92 aa		2.14	□□□□□ -2.07
PCMT1-208	ENST00000486585	LUZP6	Q538Z0	58 aa		2.1	□□□□□ -2.07
PCMT1-208	ENST00000486585	PHGR1	C9JFL3	82 aa		2.08	□□□□□ -2.08
PCMT1-208	ENST00000486585	KRTAP21-2	Q3LI59	83 aa		1.93	□□□□□ -2.1
PCMT1-208	ENST00000486585	MUC19	Q7Z5P9	8384 aa		1.77	□□□□□ -2.13
PCMT1-208	ENST00000486585	KRTAP21-1	Q3LI58	79 aa		1.62	□□□□□ -2.15
PCMT1-208	ENST00000486585	INE1	O15225	51 aa		1.59	□□□□□ -2.15
PCMT1-208	ENST00000486585	MUC16	Q8WXI7	14507 aa		1.28	□□□□□ -2.21
PCMT1-208	ENST00000486585	PRM1	P04553	51 aa		1.27	□□□□□ -2.21

Retrieved 78 of 20,778 RNA–protein pairs in 268.9 ms