RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 KRTAP13-4Q3LI77 160 aa3.04□□□□□ -1.92
UBR4-214ENST00000486515 PRO2289Q9P1D8 64 aa3.03□□□□□ -1.92
UBR4-214ENST00000486515 AHNAK2Q8IVF2 5795 aa3.02□□□□□ -1.93
UBR4-214ENST00000486515 DSTQ03001 7570 aaKnown RBP2.99□□□□□ -1.93
UBR4-214ENST00000486515 MT1BP07438 61 aa2.98□□□□□ -1.93
UBR4-214ENST00000486515 KRTAP12-1P59990 96 aa2.97□□□□□ -1.93
UBR4-214ENST00000486515 KRTAP4-8A0A0G2JLE6 195 aa2.96□□□□□ -1.94
UBR4-214ENST00000486515 SPRR2EP22531 72 aa2.96□□□□□ -1.94
UBR4-214ENST00000486515 SPRR2BP35325 72 aa2.96□□□□□ -1.94
UBR4-214ENST00000486515 SPRR2AP35326 72 aa2.96□□□□□ -1.94
UBR4-214ENST00000486515 KRTAP12-2P59991 146 aa2.95□□□□□ -1.94
UBR4-214ENST00000486515 LCE1DQ5T752 114 aa2.95□□□□□ -1.94
UBR4-214ENST00000486515 SPRR5A0A1B0GTR4 108 aa2.92□□□□□ -1.94
UBR4-214ENST00000486515 LCE5AQ5TCM9 118 aa2.91□□□□□ -1.94
UBR4-214ENST00000486515 KRTAP10-5P60370 271 aa2.9□□□□□ -1.95
UBR4-214ENST00000486515 SPRR2DP22532 72 aa2.87□□□□□ -1.95
UBR4-214ENST00000486515 KRTAP5-10Q6L8G5 202 aa2.87□□□□□ -1.95
UBR4-214ENST00000486515 KRTAP4-9Q9BYQ8 210 aa2.87□□□□□ -1.95
UBR4-214ENST00000486515 HMCN1Q96RW7 5635 aa2.86□□□□□ -1.95
UBR4-214ENST00000486515 MT1XP80297 61 aa2.86□□□□□ -1.95
UBR4-214ENST00000486515 TNP1P09430 55 aa2.85□□□□□ -1.95
UBR4-214ENST00000486515 KRTAP5-7Q6L8G8 165 aa2.85□□□□□ -1.95
UBR4-214ENST00000486515 KRTAP4-7Q9BYR0 210 aa2.84□□□□□ -1.95
UBR4-214ENST00000486515 SPRR2FQ96RM1 72 aa2.83□□□□□ -1.96
UBR4-214ENST00000486515 LCE1AQ5T7P2 110 aa2.81□□□□□ -1.96
UBR4-214ENST00000486515 C10orf95Q9H7T3 257 aa2.79□□□□□ -1.96
UBR4-214ENST00000486515 KRTAP4-11Q9BYQ6 195 aa2.78□□□□□ -1.96
UBR4-214ENST00000486515 KRTAP10-12P60413 245 aa2.76□□□□□ -1.97
UBR4-214ENST00000486515 AHNAKQ09666 5890 aaKnown RBP2.75□□□□□ -1.97
UBR4-214ENST00000486515 KRTAP10-7P60409 375 aaPredicted RBP2.74□□□□□ -1.97
UBR4-214ENST00000486515 INE1O15225 51 aa2.73□□□□□ -1.97
UBR4-214ENST00000486515 KRTAP8-1Q8IUC2 63 aa2.73□□□□□ -1.97
UBR4-214ENST00000486515 KRTAP4-2Q9BYR5 136 aa2.71□□□□□ -1.98
UBR4-214ENST00000486515 PP632Q6XCG6 107 aa2.7□□□□□ -1.98
UBR4-214ENST00000486515 LCE3AQ5TA76 89 aa2.66□□□□□ -1.98
UBR4-214ENST00000486515 KRTAP5-3Q6L8H2 238 aa2.63□□□□□ -1.99
UBR4-214ENST00000486515 MUC5BQ9HC84 5762 aaPredicted RBP2.63□□□□□ -1.99
UBR4-214ENST00000486515 MUC5ACP98088 5654 aa2.59□□□□□ -1.99
UBR4-214ENST00000486515 KRTAP12-3P60328 96 aa2.59□□□□□ -1.99
UBR4-214ENST00000486515 KRTAP19-5Q3LI72 72 aa2.59□□□□□ -1.99
UBR4-214ENST00000486515 MT4P47944 62 aa2.58□□□□□ -2
UBR4-214ENST00000486515 MT1EP04732 61 aa2.53□□□□□ -2
UBR4-214ENST00000486515 KRTAP19-7Q3SYF9 63 aa2.53□□□□□ -2
UBR4-214ENST00000486515 KRTAP19-3Q7Z4W3 81 aa2.49□□□□□ -2.01
UBR4-214ENST00000486515 MT1GP13640 62 aa2.48□□□□□ -2.01
UBR4-214ENST00000486515 MT1LQ93083 61 aa2.46□□□□□ -2.02
UBR4-214ENST00000486515 LCE3CQ5T5A8 94 aa2.4□□□□□ -2.03
UBR4-214ENST00000486515 MT1MQ8N339 61 aa2.39□□□□□ -2.03
UBR4-214ENST00000486515 KRTAP4-3Q9BYR4 195 aa2.34□□□□□ -2.03
UBR4-214ENST00000486515 MT3P25713 68 aa2.31□□□□□ -2.04
UBR4-214ENST00000486515 KRTAP5-4Q6L8H1 288 aa2.28□□□□□ -2.04
UBR4-214ENST00000486515 KRTAP5-8O75690 187 aa2.23□□□□□ -2.05
UBR4-214ENST00000486515 KRTAP20-2Q3LI61 65 aa2.22□□□□□ -2.05
UBR4-214ENST00000486515 KRTAP9-6A8MVA2 160 aa2.18□□□□□ -2.06
UBR4-214ENST00000486515 KRTAP12-4P60329 112 aa2.15□□□□□ -2.07
UBR4-214ENST00000486515 KRTAP5-5Q701N2 237 aaPredicted RBP2.13□□□□□ -2.07
UBR4-214ENST00000486515 SYNE1Q8NF91 8797 aaKnown RBP2.13□□□□□ -2.07
UBR4-214ENST00000486515 MT1AP04731 61 aa2.11□□□□□ -2.07
UBR4-214ENST00000486515 LCE1FQ5T754 118 aa2.08□□□□□ -2.08
UBR4-214ENST00000486515 KRTAP5-2Q701N4 177 aa2.07□□□□□ -2.08
UBR4-214ENST00000486515 KRTAP6-1Q3LI64 71 aa2.06□□□□□ -2.08
UBR4-214ENST00000486515 OBSCNQ5VST9 7968 aa2.02□□□□□ -2.09
UBR4-214ENST00000486515 LCE1EQ5T753 118 aa1.97□□□□□ -2.09
UBR4-214ENST00000486515 KRTAP6-2Q3LI66 62 aa1.94□□□□□ -2.1
UBR4-214ENST00000486515 KRTAP5-11Q6L8G4 156 aa1.87□□□□□ -2.11
UBR4-214ENST00000486515 KRTAP5-1Q6L8H4 278 aa1.82□□□□□ -2.12
UBR4-214ENST00000486515 LCE3DQ9BYE3 92 aa1.82□□□□□ -2.12
UBR4-214ENST00000486515 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.76□□□□□ -2.13
UBR4-214ENST00000486515 LCE3EQ5T5B0 92 aa1.75□□□□□ -2.13
UBR4-214ENST00000486515 PHGR1C9JFL3 82 aa1.73□□□□□ -2.13
UBR4-214ENST00000486515 LCE1BQ5T7P3 118 aa1.64□□□□□ -2.15
UBR4-214ENST00000486515 LCE1CQ5T751 118 aa1.59□□□□□ -2.15
UBR4-214ENST00000486515 PRM1P04553 51 aa1.51□□□□□ -2.17
UBR4-214ENST00000486515 KRTAP4-4Q9BYR3 166 aa1.44□□□□□ -2.18
UBR4-214ENST00000486515 KRTAP21-2Q3LI59 83 aa1.33□□□□□ -2.2
UBR4-214ENST00000486515 KRTAP21-1Q3LI58 79 aa1.32□□□□□ -2.2
UBR4-214ENST00000486515 MUC19Q7Z5P9 8384 aa1.31□□□□□ -2.2
UBR4-214ENST00000486515 MUC16Q8WXI7 14507 aa0.87□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 11 ms