RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 CLTCL1P53675 1640 aa-1.4□□□□□ -2.63
LTN1-206ENST00000486427 KRTAP20-1Q3LI63 56 aa-1.41□□□□□ -2.64
LTN1-206ENST00000486427 SMIM5Q71RC9 77 aa-1.41□□□□□ -2.64
LTN1-206ENST00000486427 ADCY10Q96PN6 1610 aa-1.42□□□□□ -2.64
LTN1-206ENST00000486427 TRPM2O94759 1503 aa-1.43□□□□□ -2.64
LTN1-206ENST00000486427 NFAT5O94916 1531 aa-1.43□□□□□ -2.64
LTN1-206ENST00000486427 SMIM2Q9BVW6 85 aa-1.44□□□□□ -2.64
LTN1-206ENST00000486427 ABCC8Q09428 1581 aa-1.44□□□□□ -2.64
LTN1-206ENST00000486427 WDFY4Q6ZS81 3184 aa-1.44□□□□□ -2.64
LTN1-206ENST00000486427 CEP250Q9BV73 2442 aa-1.46□□□□□ -2.64
LTN1-206ENST00000486427 FANCD2Q9BXW9 1451 aa-1.46□□□□□ -2.64
LTN1-206ENST00000486427 CEP350Q5VT06 3117 aa-1.48□□□□□ -2.65
LTN1-206ENST00000486427 MT1FP04733 61 aa-1.5□□□□□ -2.65
LTN1-206ENST00000486427 DMDP11532 3685 aa-1.51□□□□□ -2.65
LTN1-206ENST00000486427 MUC3AQ02505 3323 aa-1.53□□□□□ -2.65
LTN1-206ENST00000486427 CMC2Q9NRP2 79 aa-1.53□□□□□ -2.65
LTN1-206ENST00000486427 EP400Q96L91 3159 aa-1.55□□□□□ -2.66
LTN1-206ENST00000486427 SMIM31A0A1B0GVY4 71 aa-1.56□□□□□ -2.66
LTN1-206ENST00000486427 DCHS1Q96JQ0 3298 aa-1.57□□□□□ -2.66
LTN1-206ENST00000486427 NDUFA1O15239 70 aa-1.57□□□□□ -2.66
LTN1-206ENST00000486427 CENPEQ02224 2701 aa-1.6□□□□□ -2.67
LTN1-206ENST00000486427 XIRP2A4UGR9 3374 aa-1.62□□□□□ -2.67
LTN1-206ENST00000486427 ERICH3Q5RHP9 1530 aa-1.65□□□□□ -2.67
LTN1-206ENST00000486427 DNAH12Q6ZR08 3092 aa-1.65□□□□□ -2.67
LTN1-206ENST00000486427 KRTAP19-6Q3LI70 58 aa-1.66□□□□□ -2.68
LTN1-206ENST00000486427 TOMM7Q9P0U1 55 aa-1.66□□□□□ -2.68
LTN1-206ENST00000486427 MKI67P46013 3256 aaKnown RBP-1.67□□□□□ -2.68
LTN1-206ENST00000486427 USP34Q70CQ2 3546 aa-1.69□□□□□ -2.68
LTN1-206ENST00000486427 LINC01590Q5TEZ4 76 aa-1.7□□□□□ -2.68
LTN1-206ENST00000486427 DUOX1Q9NRD9 1551 aa-1.71□□□□□ -2.68
LTN1-206ENST00000486427 RHPN1-AS1Q9BWJ2 59 aa-1.71□□□□□ -2.68
LTN1-206ENST00000486427 SAMD9LQ8IVG5 1584 aa-1.72□□□□□ -2.68
LTN1-206ENST00000486427 DNAH14Q0VDD8 3507 aa-1.74□□□□□ -2.69
LTN1-206ENST00000486427 LOC400499M0QZD8 3231 aa-1.74□□□□□ -2.69
LTN1-206ENST00000486427 CFAP47Q6ZTR5 3102 aa-1.75□□□□□ -2.69
LTN1-206ENST00000486427 DEFB133Q30KQ1 61 aa-1.75□□□□□ -2.69
LTN1-206ENST00000486427 IQGAP2Q13576 1575 aa-1.76□□□□□ -2.69
LTN1-206ENST00000486427 TTTY10Q9BZA0 68 aa-1.76□□□□□ -2.69
LTN1-206ENST00000486427 SNRPGP15A8MWD9 76 aa-1.77□□□□□ -2.69
LTN1-206ENST00000486427 A0A096LNI7 61 aa-1.78□□□□□ -2.69
LTN1-206ENST00000486427 ASPMQ8IZT6 3477 aa-1.78□□□□□ -2.69
LTN1-206ENST00000486427 RPL39P62891 51 aaKnown RBP-1.79□□□□□ -2.7
LTN1-206ENST00000486427 UNC80Q8N2C7 3258 aa-1.79□□□□□ -2.7
LTN1-206ENST00000486427 MROH2BQ7Z745 1585 aa-1.8□□□□□ -2.7
LTN1-206ENST00000486427 TOP2AP11388 1531 aaKnown RBP-1.8□□□□□ -2.7
LTN1-206ENST00000486427 ATP7AQ04656 1500 aa-1.8□□□□□ -2.7
LTN1-206ENST00000486427 HTN1P15515 57 aa-1.82□□□□□ -2.7
LTN1-206ENST00000486427 BRCA2P51587 3418 aa-1.85□□□□□ -2.71
LTN1-206ENST00000486427 DEFB124Q8NES8 71 aa-1.86□□□□□ -2.71
LTN1-206ENST00000486427 CD52P31358 61 aa-1.87□□□□□ -2.71
LTN1-206ENST00000486427 RPL39LQ96EH5 51 aaKnown RBP-1.87□□□□□ -2.71
LTN1-206ENST00000486427 VCANP13611 3396 aa-1.92□□□□□ -2.72
LTN1-206ENST00000486427 KRTAP19-2Q3LHN2 52 aa-1.92□□□□□ -2.72
LTN1-206ENST00000486427 TOMM5Q8N4H5 51 aa-1.92□□□□□ -2.72
LTN1-206ENST00000486427 CENPFP49454 3210 aa-1.93□□□□□ -2.72
LTN1-206ENST00000486427 DEFB104AQ8WTQ1 72 aa-1.95□□□□□ -2.72
LTN1-206ENST00000486427 CDH23Q9H251 3354 aa-1.98□□□□□ -2.73
LTN1-206ENST00000486427 VPS13AQ96RL7 3174 aa-2.03□□□□□ -2.73
LTN1-206ENST00000486427 H3BUX3 64 aa-2.07□□□□□ -2.74
LTN1-206ENST00000486427 LINC01556Q5JQF7 62 aa-2.11□□□□□ -2.75
LTN1-206ENST00000486427 GCC2Q8IWJ2 1684 aa-2.17□□□□□ -2.76
LTN1-206ENST00000486427 K7EIM0 57 aa-2.19□□□□□ -2.76
LTN1-206ENST00000486427 UTRNP46939 3433 aa-2.23□□□□□ -2.77
LTN1-206ENST00000486427 ARHGAP5-AS1Q96IT6 56 aa-2.27□□□□□ -2.77
LTN1-206ENST00000486427 PRCDQ00LT1 54 aa-2.3□□□□□ -2.78
LTN1-206ENST00000486427 APELAP0DMC3 54 aa-2.33□□□□□ -2.78
LTN1-206ENST00000486427 A0A096LPF7 62 aa-2.34□□□□□ -2.78
LTN1-206ENST00000486427 SNRPGP62308 76 aaKnown RBP-2.34□□□□□ -2.78
LTN1-206ENST00000486427 TMEM167AQ8TBQ9 72 aa-2.39□□□□□ -2.79
LTN1-206ENST00000486427 GOLGB1Q14789 3259 aaKnown RBP-2.52□□□□□ -2.81
LTN1-206ENST00000486427 HTN3P15516 51 aa-2.52□□□□□ -2.81
LTN1-206ENST00000486427 RPL39P5Q59GN2 51 aa-2.52□□□□□ -2.81
LTN1-206ENST00000486427 H3BSH0 61 aa-2.54□□□□□ -2.82
LTN1-206ENST00000486427 DEFB108AA8MXU0 73 aa-2.58□□□□□ -2.82
LTN1-206ENST00000486427 Q9Y3F1 56 aa-2.6□□□□□ -2.83
LTN1-206ENST00000486427 COX14Q96I36 57 aa-2.81□□□□□ -2.86
LTN1-206ENST00000486427 DEFB108BQ8NET1 73 aa-2.91□□□□□ -2.88
LTN1-206ENST00000486427 STATHP02808 62 aa-3.28□□□□□ -2.93
Retrieved 78 of 20,778 RNA–protein pairs in 91.3 ms