RNA–Protein interactions for RNA: ENST00000486420.1

C9orf16-202, Transcript of chromosome 9 open reading frame 16, humanhuman

TSL 5

Gene C9orf16, Length 434 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf16-202ENST00000486420 KRTAP2-1Q9BYU5 128 aa4.63□□□□□ -1.67
C9orf16-202ENST00000486420 KRTAP9-9Q9BYP9 154 aa4.62□□□□□ -1.67
C9orf16-202ENST00000486420 KRTAP9-4Q9BYQ2 154 aa4.62□□□□□ -1.67
C9orf16-202ENST00000486420 KRTAP23-1A1A580 65 aa4.6□□□□□ -1.67
C9orf16-202ENST00000486420 KRTAP19-7Q3SYF9 63 aa4.6□□□□□ -1.67
C9orf16-202ENST00000486420 MT1EP04732 61 aa4.58□□□□□ -1.68
C9orf16-202ENST00000486420 LCE3AQ5TA76 89 aa4.57□□□□□ -1.68
C9orf16-202ENST00000486420 ROMO1P60602 79 aa4.55□□□□□ -1.68
C9orf16-202ENST00000486420 KRTAP19-5Q3LI72 72 aa4.55□□□□□ -1.68
C9orf16-202ENST00000486420 PP632Q6XCG6 107 aa4.55□□□□□ -1.68
C9orf16-202ENST00000486420 KRTAP19-3Q7Z4W3 81 aa4.53□□□□□ -1.68
C9orf16-202ENST00000486420 MT1GP13640 62 aa4.5□□□□□ -1.69
C9orf16-202ENST00000486420 LCE5AQ5TCM9 118 aa4.49□□□□□ -1.69
C9orf16-202ENST00000486420 KRTAP12-3P60328 96 aa4.48□□□□□ -1.69
C9orf16-202ENST00000486420 KRTAP19-4Q3LI73 84 aa4.48□□□□□ -1.69
C9orf16-202ENST00000486420 KRTAP4-7Q9BYR0 210 aa4.44□□□□□ -1.7
C9orf16-202ENST00000486420 LCE1DQ5T752 114 aa4.42□□□□□ -1.7
C9orf16-202ENST00000486420 BRK1Q8WUW1 75 aa4.42□□□□□ -1.7
C9orf16-202ENST00000486420 MT1LQ93083 61 aa4.41□□□□□ -1.7
C9orf16-202ENST00000486420 DSTQ03001 7570 aaKnown RBP4.39□□□□□ -1.71
C9orf16-202ENST00000486420 MT1MQ8N339 61 aa4.34□□□□□ -1.71
C9orf16-202ENST00000486420 KRTAP4-9Q9BYQ8 210 aa4.3□□□□□ -1.72
C9orf16-202ENST00000486420 KRTAP15-1Q3LI76 137 aa4.29□□□□□ -1.72
C9orf16-202ENST00000486420 KRTAP4-2Q9BYR5 136 aa4.23□□□□□ -1.73
C9orf16-202ENST00000486420 PMAIP1Q13794 54 aa4.21□□□□□ -1.74
C9orf16-202ENST00000486420 GPR98Q8WXG9 6306 aa4.16□□□□□ -1.74
C9orf16-202ENST00000486420 LCE4AQ5TA78 99 aa4.15□□□□□ -1.75
C9orf16-202ENST00000486420 LCE3CQ5T5A8 94 aa4.14□□□□□ -1.75
C9orf16-202ENST00000486420 KRTAP4-11Q9BYQ6 195 aa4.12□□□□□ -1.75
C9orf16-202ENST00000486420 PRO0628Q9UI54 55 aa4.12□□□□□ -1.75
C9orf16-202ENST00000486420 KRTAP4-3Q9BYR4 195 aa4.09□□□□□ -1.75
C9orf16-202ENST00000486420 HMCN1Q96RW7 5635 aa4.07□□□□□ -1.76
C9orf16-202ENST00000486420 MT4P47944 62 aa4.06□□□□□ -1.76
C9orf16-202ENST00000486420 KRTAP5-4Q6L8H1 288 aa4.04□□□□□ -1.76
C9orf16-202ENST00000486420 H3BS24 57 aa3.97□□□□□ -1.77
C9orf16-202ENST00000486420 KRTAP5-5Q701N2 237 aaPredicted RBP3.95□□□□□ -1.78
C9orf16-202ENST00000486420 AHNAK2Q8IVF2 5795 aa3.95□□□□□ -1.78
C9orf16-202ENST00000486420 KRTAP12-4P60329 112 aa3.92□□□□□ -1.78
C9orf16-202ENST00000486420 KTN1-AS1Q86SY8 53 aa3.88□□□□□ -1.79
C9orf16-202ENST00000486420 SPRR5A0A1B0GTR4 108 aa3.87□□□□□ -1.79
C9orf16-202ENST00000486420 KRTAP5-3Q6L8H2 238 aa3.87□□□□□ -1.79
C9orf16-202ENST00000486420 KRTAP5-10Q6L8G5 202 aa3.85□□□□□ -1.79
C9orf16-202ENST00000486420 KRTAP20-2Q3LI61 65 aa3.82□□□□□ -1.8
C9orf16-202ENST00000486420 PRAC1Q96KF2 57 aa3.82□□□□□ -1.8
C9orf16-202ENST00000486420 MT1AP04731 61 aa3.8□□□□□ -1.8
C9orf16-202ENST00000486420 SYNE1Q8NF91 8797 aaKnown RBP3.76□□□□□ -1.81
C9orf16-202ENST00000486420 KRTAP9-6A8MVA2 160 aa3.75□□□□□ -1.81
C9orf16-202ENST00000486420 KRTAP5-7Q6L8G8 165 aa3.73□□□□□ -1.81
C9orf16-202ENST00000486420 KRTAP6-1Q3LI64 71 aa3.67□□□□□ -1.82
C9orf16-202ENST00000486420 SVIPQ8NHG7 77 aa3.67□□□□□ -1.82
C9orf16-202ENST00000486420 KRTAP5-2Q701N4 177 aa3.56□□□□□ -1.84
C9orf16-202ENST00000486420 MT3P25713 68 aa3.52□□□□□ -1.85
C9orf16-202ENST00000486420 KRTAP6-2Q3LI66 62 aa3.49□□□□□ -1.85
C9orf16-202ENST00000486420 LUZP6Q538Z0 58 aa3.46□□□□□ -1.86
C9orf16-202ENST00000486420 KRTAP5-8O75690 187 aa3.37□□□□□ -1.87
C9orf16-202ENST00000486420 OBSCNQ5VST9 7968 aa3.37□□□□□ -1.87
C9orf16-202ENST00000486420 MUC5ACP98088 5654 aa3.25□□□□□ -1.89
C9orf16-202ENST00000486420 MUC5BQ9HC84 5762 aaPredicted RBP3.23□□□□□ -1.89
C9orf16-202ENST00000486420 AHNAKQ09666 5890 aaKnown RBP3.23□□□□□ -1.89
C9orf16-202ENST00000486420 LCE1EQ5T753 118 aa3.2□□□□□ -1.9
C9orf16-202ENST00000486420 KRTAP5-1Q6L8H4 278 aa3.17□□□□□ -1.9
C9orf16-202ENST00000486420 LCE3DQ9BYE3 92 aa3.07□□□□□ -1.92
C9orf16-202ENST00000486420 LCE1CQ5T751 118 aa2.95□□□□□ -1.94
C9orf16-202ENST00000486420 LCE1BQ5T7P3 118 aa2.95□□□□□ -1.94
C9orf16-202ENST00000486420 LCE3EQ5T5B0 92 aa2.93□□□□□ -1.94
C9orf16-202ENST00000486420 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.88□□□□□ -1.95
C9orf16-202ENST00000486420 A0A0A0MQY5 61 aa2.86□□□□□ -1.95
C9orf16-202ENST00000486420 NDUFAF8A1L188 74 aa2.86□□□□□ -1.95
C9orf16-202ENST00000486420 KRTAP5-11Q6L8G4 156 aa2.76□□□□□ -1.97
C9orf16-202ENST00000486420 LCE1FQ5T754 118 aa2.58□□□□□ -2
C9orf16-202ENST00000486420 INE1O15225 51 aa2.49□□□□□ -2.01
C9orf16-202ENST00000486420 KRTAP21-2Q3LI59 83 aa2.43□□□□□ -2.02
C9orf16-202ENST00000486420 KRTAP4-4Q9BYR3 166 aa2.38□□□□□ -2.03
C9orf16-202ENST00000486420 PRM1P04553 51 aa2.27□□□□□ -2.05
C9orf16-202ENST00000486420 PHGR1C9JFL3 82 aa2.25□□□□□ -2.05
C9orf16-202ENST00000486420 MUC19Q7Z5P9 8384 aa2.08□□□□□ -2.08
C9orf16-202ENST00000486420 KRTAP21-1Q3LI58 79 aa1.73□□□□□ -2.13
C9orf16-202ENST00000486420 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 11.1 ms