RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 KRTAP8-1Q8IUC2 63 aa4.5□□□□□ -1.69
NUP50-216ENST00000486184 CDC42SE1Q9NRR8 79 aa4.46□□□□□ -1.7
NUP50-216ENST00000486184 TNP1P09430 55 aa4.45□□□□□ -1.7
NUP50-216ENST00000486184 C10orf95Q9H7T3 257 aa4.45□□□□□ -1.7
NUP50-216ENST00000486184 KRTAP5-9P26371 169 aa4.42□□□□□ -1.7
NUP50-216ENST00000486184 SPRR2FQ96RM1 72 aa4.42□□□□□ -1.7
NUP50-216ENST00000486184 KMT2DO14686 5537 aa4.41□□□□□ -1.7
NUP50-216ENST00000486184 MT3P25713 68 aa4.33□□□□□ -1.72
NUP50-216ENST00000486184 KRTAP25-1Q3LHN0 102 aa4.33□□□□□ -1.72
NUP50-216ENST00000486184 BRK1Q8WUW1 75 aa4.31□□□□□ -1.72
NUP50-216ENST00000486184 SPRR2EP22531 72 aa4.29□□□□□ -1.72
NUP50-216ENST00000486184 SPRR2BP35325 72 aa4.29□□□□□ -1.72
NUP50-216ENST00000486184 SPRR2AP35326 72 aa4.29□□□□□ -1.72
NUP50-216ENST00000486184 ROMO1P60602 79 aa4.28□□□□□ -1.72
NUP50-216ENST00000486184 LCE3AQ5TA76 89 aa4.28□□□□□ -1.72
NUP50-216ENST00000486184 KRTAP2-2Q9BYT5 123 aa4.28□□□□□ -1.72
NUP50-216ENST00000486184 MUC12Q9UKN1 5478 aa4.26□□□□□ -1.73
NUP50-216ENST00000486184 KRTAP19-5Q3LI72 72 aa4.23□□□□□ -1.73
NUP50-216ENST00000486184 KRTAP19-7Q3SYF9 63 aa4.23□□□□□ -1.73
NUP50-216ENST00000486184 MT1EP04732 61 aa4.2□□□□□ -1.74
NUP50-216ENST00000486184 MDN1Q9NU22 5596 aa4.19□□□□□ -1.74
NUP50-216ENST00000486184 SPRR2DP22532 72 aa4.15□□□□□ -1.75
NUP50-216ENST00000486184 KRTAP12-3P60328 96 aa4.14□□□□□ -1.75
NUP50-216ENST00000486184 KRTAP19-3Q7Z4W3 81 aa4.12□□□□□ -1.75
NUP50-216ENST00000486184 PP632Q6XCG6 107 aa4.11□□□□□ -1.75
NUP50-216ENST00000486184 KRTAP2-3P0C7H8 128 aa4.06□□□□□ -1.76
NUP50-216ENST00000486184 MT1GP13640 62 aa4.06□□□□□ -1.76
NUP50-216ENST00000486184 PMAIP1Q13794 54 aa4.06□□□□□ -1.76
NUP50-216ENST00000486184 MT1LQ93083 61 aa4.06□□□□□ -1.76
NUP50-216ENST00000486184 KRTAP2-4Q9BYR9 128 aa4.06□□□□□ -1.76
NUP50-216ENST00000486184 PRO0628Q9UI54 55 aa4□□□□□ -1.77
NUP50-216ENST00000486184 MT1MQ8N339 61 aa3.98□□□□□ -1.77
NUP50-216ENST00000486184 KRTAP2-1Q9BYU5 128 aa3.94□□□□□ -1.78
NUP50-216ENST00000486184 LCE1EQ5T753 118 aa3.89□□□□□ -1.79
NUP50-216ENST00000486184 DSTQ03001 7570 aaKnown RBP3.86□□□□□ -1.79
NUP50-216ENST00000486184 NDUFAF8A1L188 74 aa3.86□□□□□ -1.79
NUP50-216ENST00000486184 KRTAP4-3Q9BYR4 195 aa3.86□□□□□ -1.79
NUP50-216ENST00000486184 PRAC1Q96KF2 57 aa3.85□□□□□ -1.79
NUP50-216ENST00000486184 LCE3CQ5T5A8 94 aa3.83□□□□□ -1.8
NUP50-216ENST00000486184 SPRR5A0A1B0GTR4 108 aa3.82□□□□□ -1.8
NUP50-216ENST00000486184 AHNAK2Q8IVF2 5795 aa3.82□□□□□ -1.8
NUP50-216ENST00000486184 KRTAP5-11Q6L8G4 156 aa3.76□□□□□ -1.81
NUP50-216ENST00000486184 KTN1-AS1Q86SY8 53 aa3.76□□□□□ -1.81
NUP50-216ENST00000486184 LCE1FQ5T754 118 aa3.75□□□□□ -1.81
NUP50-216ENST00000486184 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.64□□□□□ -1.83
NUP50-216ENST00000486184 KRTAP5-4Q6L8H1 288 aa3.6□□□□□ -1.83
NUP50-216ENST00000486184 MT4P47944 62 aa3.59□□□□□ -1.83
NUP50-216ENST00000486184 KRTAP5-5Q701N2 237 aaPredicted RBP3.59□□□□□ -1.83
NUP50-216ENST00000486184 KRTAP5-7Q6L8G8 165 aa3.56□□□□□ -1.84
NUP50-216ENST00000486184 KRTAP9-6A8MVA2 160 aa3.55□□□□□ -1.84
NUP50-216ENST00000486184 KRTAP5-10Q6L8G5 202 aa3.55□□□□□ -1.84
NUP50-216ENST00000486184 KRTAP12-4P60329 112 aa3.5□□□□□ -1.85
NUP50-216ENST00000486184 AHNAKQ09666 5890 aaKnown RBP3.49□□□□□ -1.85
NUP50-216ENST00000486184 MT1AP04731 61 aa3.47□□□□□ -1.85
NUP50-216ENST00000486184 HMCN1Q96RW7 5635 aa3.45□□□□□ -1.86
NUP50-216ENST00000486184 KRTAP6-1Q3LI64 71 aa3.42□□□□□ -1.86
NUP50-216ENST00000486184 KRTAP20-2Q3LI61 65 aa3.41□□□□□ -1.86
NUP50-216ENST00000486184 MUC5BQ9HC84 5762 aaPredicted RBP3.34□□□□□ -1.87
NUP50-216ENST00000486184 SYNE1Q8NF91 8797 aaKnown RBP3.33□□□□□ -1.88
NUP50-216ENST00000486184 LUZP6Q538Z0 58 aa3.25□□□□□ -1.89
NUP50-216ENST00000486184 KRTAP6-2Q3LI66 62 aa3.22□□□□□ -1.89
NUP50-216ENST00000486184 LCE3EQ5T5B0 92 aa3.21□□□□□ -1.9
NUP50-216ENST00000486184 KRTAP5-2Q701N4 177 aa3.2□□□□□ -1.9
NUP50-216ENST00000486184 KRTAP5-1Q6L8H4 278 aa3.18□□□□□ -1.9
NUP50-216ENST00000486184 MUC5ACP98088 5654 aa3.15□□□□□ -1.9
NUP50-216ENST00000486184 KRTAP4-4Q9BYR3 166 aa3.01□□□□□ -1.93
NUP50-216ENST00000486184 KRTAP5-8O75690 187 aa2.91□□□□□ -1.94
NUP50-216ENST00000486184 OBSCNQ5VST9 7968 aa2.91□□□□□ -1.94
NUP50-216ENST00000486184 LCE3DQ9BYE3 92 aa2.83□□□□□ -1.96
NUP50-216ENST00000486184 LCE1BQ5T7P3 118 aa2.68□□□□□ -1.98
NUP50-216ENST00000486184 LCE1CQ5T751 118 aa2.62□□□□□ -1.99
NUP50-216ENST00000486184 INE1O15225 51 aa2.36□□□□□ -2.03
NUP50-216ENST00000486184 KRTAP21-2Q3LI59 83 aa2.23□□□□□ -2.05
NUP50-216ENST00000486184 PRM1P04553 51 aa2.2□□□□□ -2.06
NUP50-216ENST00000486184 PHGR1C9JFL3 82 aa2.17□□□□□ -2.06
NUP50-216ENST00000486184 MUC19Q7Z5P9 8384 aa2.04□□□□□ -2.08
NUP50-216ENST00000486184 KRTAP21-1Q3LI58 79 aa1.61□□□□□ -2.15
NUP50-216ENST00000486184 MUC16Q8WXI7 14507 aa1.28□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 129 ms