RNA–Protein interactions for RNA: ENST00000485820.1

YIF1A-208, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 653 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-208ENST00000485820 DSTQ03001 7570 aaKnown RBP5.46□□□□□ -1.54
YIF1A-208ENST00000485820 TNP1P09430 55 aa5.43□□□□□ -1.54
YIF1A-208ENST00000485820 H3BS24 57 aa5.4□□□□□ -1.54
YIF1A-208ENST00000485820 MT1GP13640 62 aa5.4□□□□□ -1.54
YIF1A-208ENST00000485820 UQCR11O14957 56 aa5.39□□□□□ -1.55
YIF1A-208ENST00000485820 LCE3AQ5TA76 89 aa5.39□□□□□ -1.55
YIF1A-208ENST00000485820 MT1LQ93083 61 aa5.34□□□□□ -1.55
YIF1A-208ENST00000485820 PP632Q6XCG6 107 aa5.31□□□□□ -1.56
YIF1A-208ENST00000485820 MT1MQ8N339 61 aa5.3□□□□□ -1.56
YIF1A-208ENST00000485820 PSPHP1O15172 72 aa5.29□□□□□ -1.56
YIF1A-208ENST00000485820 MIR22HGQ0VDD5 57 aa5.28□□□□□ -1.56
YIF1A-208ENST00000485820 CDC42SE1Q9NRR8 79 aa5.21□□□□□ -1.58
YIF1A-208ENST00000485820 KRTAP4-9Q9BYQ8 210 aa5.2□□□□□ -1.58
YIF1A-208ENST00000485820 KRTAP4-3Q9BYR4 195 aa5.2□□□□□ -1.58
YIF1A-208ENST00000485820 A6NED7 52 aa5.19□□□□□ -1.58
YIF1A-208ENST00000485820 KRTAP12-3P60328 96 aa5.19□□□□□ -1.58
YIF1A-208ENST00000485820 KRTAP25-1Q3LHN0 102 aa5.14□□□□□ -1.59
YIF1A-208ENST00000485820 K7ERS5 55 aa5.13□□□□□ -1.59
YIF1A-208ENST00000485820 KRTAP4-7Q9BYR0 210 aa5.1□□□□□ -1.59
YIF1A-208ENST00000485820 LCE4AQ5TA78 99 aa5.09□□□□□ -1.59
YIF1A-208ENST00000485820 LCE1DQ5T752 114 aa5.08□□□□□ -1.6
YIF1A-208ENST00000485820 KRTAP5-4Q6L8H1 288 aa5.05□□□□□ -1.6
YIF1A-208ENST00000485820 MT4P47944 62 aa5.03□□□□□ -1.6
YIF1A-208ENST00000485820 KRTAP23-1A1A580 65 aa4.98□□□□□ -1.61
YIF1A-208ENST00000485820 GPR98Q8WXG9 6306 aa4.95□□□□□ -1.62
YIF1A-208ENST00000485820 A0A0A0MQY5 61 aa4.94□□□□□ -1.62
YIF1A-208ENST00000485820 KRTAP4-6Q9BYQ5 205 aa4.93□□□□□ -1.62
YIF1A-208ENST00000485820 HMCN1Q96RW7 5635 aa4.91□□□□□ -1.62
YIF1A-208ENST00000485820 KRTAP19-4Q3LI73 84 aa4.91□□□□□ -1.62
YIF1A-208ENST00000485820 KRTAP15-1Q3LI76 137 aa4.87□□□□□ -1.63
YIF1A-208ENST00000485820 KRTAP5-5Q701N2 237 aaPredicted RBP4.87□□□□□ -1.63
YIF1A-208ENST00000485820 PRAC1Q96KF2 57 aa4.84□□□□□ -1.63
YIF1A-208ENST00000485820 LOC100996750A0A140TA64 210 aa4.83□□□□□ -1.64
YIF1A-208ENST00000485820 ROMO1P60602 79 aa4.82□□□□□ -1.64
YIF1A-208ENST00000485820 LCE3CQ5T5A8 94 aa4.79□□□□□ -1.64
YIF1A-208ENST00000485820 KRTAP20-2Q3LI61 65 aa4.73□□□□□ -1.65
YIF1A-208ENST00000485820 AHNAK2Q8IVF2 5795 aa4.72□□□□□ -1.65
YIF1A-208ENST00000485820 SPRR5A0A1B0GTR4 108 aa4.72□□□□□ -1.65
YIF1A-208ENST00000485820 KRTAP12-4P60329 112 aa4.7□□□□□ -1.66
YIF1A-208ENST00000485820 KRTAP5-10Q6L8G5 202 aa4.69□□□□□ -1.66
YIF1A-208ENST00000485820 SYNE1Q8NF91 8797 aaKnown RBP4.68□□□□□ -1.66
YIF1A-208ENST00000485820 KRTAP5-3Q6L8H2 238 aa4.62□□□□□ -1.67
YIF1A-208ENST00000485820 KRTAP9-6A8MVA2 160 aa4.55□□□□□ -1.68
YIF1A-208ENST00000485820 MT1AP04731 61 aa4.54□□□□□ -1.68
YIF1A-208ENST00000485820 KRTAP6-1Q3LI64 71 aa4.52□□□□□ -1.69
YIF1A-208ENST00000485820 KRTAP5-7Q6L8G8 165 aa4.5□□□□□ -1.69
YIF1A-208ENST00000485820 LUZP6Q538Z0 58 aa4.46□□□□□ -1.7
YIF1A-208ENST00000485820 KRTAP5-2Q701N4 177 aa4.43□□□□□ -1.7
YIF1A-208ENST00000485820 KRTAP9-4Q9BYQ2 154 aa4.4□□□□□ -1.71
YIF1A-208ENST00000485820 NDUFAF8A1L188 74 aa4.39□□□□□ -1.71
YIF1A-208ENST00000485820 KRTAP4-11Q9BYQ6 195 aa4.31□□□□□ -1.72
YIF1A-208ENST00000485820 KRTAP6-2Q3LI66 62 aa4.3□□□□□ -1.72
YIF1A-208ENST00000485820 OBSCNQ5VST9 7968 aa4.2□□□□□ -1.74
YIF1A-208ENST00000485820 KRTAP5-8O75690 187 aa4.18□□□□□ -1.74
YIF1A-208ENST00000485820 MT3P25713 68 aa4.15□□□□□ -1.75
YIF1A-208ENST00000485820 KRTAP5-1Q6L8H4 278 aa3.96□□□□□ -1.78
YIF1A-208ENST00000485820 KRTAP9-9Q9BYP9 154 aa3.92□□□□□ -1.78
YIF1A-208ENST00000485820 MUC5BQ9HC84 5762 aaPredicted RBP3.91□□□□□ -1.78
YIF1A-208ENST00000485820 AHNAKQ09666 5890 aaKnown RBP3.89□□□□□ -1.79
YIF1A-208ENST00000485820 MUC5ACP98088 5654 aa3.86□□□□□ -1.79
YIF1A-208ENST00000485820 INE1O15225 51 aa3.83□□□□□ -1.8
YIF1A-208ENST00000485820 LCE1EQ5T753 118 aa3.81□□□□□ -1.8
YIF1A-208ENST00000485820 KRTAP4-2Q9BYR5 136 aa3.6□□□□□ -1.83
YIF1A-208ENST00000485820 LCE1BQ5T7P3 118 aa3.56□□□□□ -1.84
YIF1A-208ENST00000485820 LCE1CQ5T751 118 aa3.53□□□□□ -1.84
YIF1A-208ENST00000485820 LCE3DQ9BYE3 92 aa3.46□□□□□ -1.86
YIF1A-208ENST00000485820 LCE3EQ5T5B0 92 aa3.26□□□□□ -1.89
YIF1A-208ENST00000485820 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.23□□□□□ -1.89
YIF1A-208ENST00000485820 KRTAP4-12Q9BQ66 201 aa3.23□□□□□ -1.89
YIF1A-208ENST00000485820 KRTAP5-11Q6L8G4 156 aa3.18□□□□□ -1.9
YIF1A-208ENST00000485820 LCE1FQ5T754 118 aa3.09□□□□□ -1.91
YIF1A-208ENST00000485820 KRTAP21-2Q3LI59 83 aa2.99□□□□□ -1.93
YIF1A-208ENST00000485820 PHGR1C9JFL3 82 aa2.76□□□□□ -1.97
YIF1A-208ENST00000485820 KRTAP4-4Q9BYR3 166 aa2.72□□□□□ -1.97
YIF1A-208ENST00000485820 MUC19Q7Z5P9 8384 aa2.57□□□□□ -2
YIF1A-208ENST00000485820 PRM1P04553 51 aa2.47□□□□□ -2.01
YIF1A-208ENST00000485820 KRTAP21-1Q3LI58 79 aa2.05□□□□□ -2.08
YIF1A-208ENST00000485820 MUC16Q8WXI7 14507 aa1.82□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 165.3 ms